RNA–Protein interactions for RNA: ENST00000495040.1

PLXNA3-208, Transcript of plexin A3, human

TSL 5

Gene PLXNA3, Length 421 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLXNA3-208	ENST00000495040	MKRN1	Q9UHC7	482 aa	Known RBP	33.99	■■■■□ 3.03
PLXNA3-208	ENST00000495040	GGA1	Q9UJY5	639 aa		33.99	■■■■□ 3.03
PLXNA3-208	ENST00000495040	UFL1	O94874	794 aa		33.98	■■■■□ 3.03
PLXNA3-208	ENST00000495040	PCNT	O95613	3336 aa		33.97	■■■■□ 3.03
PLXNA3-208	ENST00000495040	ECE2	O60344	883 aa		33.97	■■■■□ 3.03
PLXNA3-208	ENST00000495040	RTL9	Q8NET4	1388 aa		33.97	■■■■□ 3.03
PLXNA3-208	ENST00000495040	GPR101	Q96P66	508 aa	Predicted RBP	33.96	■■■■□ 3.03
PLXNA3-208	ENST00000495040	PLA2G12B	Q9BX93	195 aa		33.96	■■■■□ 3.03
PLXNA3-208	ENST00000495040	GREM2	Q9H772	168 aa		33.96	■■■■□ 3.03
PLXNA3-208	ENST00000495040	ZNF521	Q96K83	1311 aa		33.96	■■■■□ 3.03
PLXNA3-208	ENST00000495040	PSMD14	O00487	310 aa		33.95	■■■■□ 3.03
PLXNA3-208	ENST00000495040	DOK7	Q18PE1	504 aa		33.95	■■■■□ 3.03
PLXNA3-208	ENST00000495040	CNOT7	Q9UIV1	285 aa	Known RBP	33.95	■■■■□ 3.03
PLXNA3-208	ENST00000495040	XDH	P47989	1333 aa		33.95	■■■■□ 3.03
PLXNA3-208	ENST00000495040	CNTNAP1	P78357	1384 aa		33.95	■■■■□ 3.02
PLXNA3-208	ENST00000495040	DPF2	Q92785	391 aa		33.94	■■■■□ 3.02
PLXNA3-208	ENST00000495040		H7C1D1	291 aa		33.93	■■■■□ 3.02
PLXNA3-208	ENST00000495040	BSDC1	Q9NW68	430 aa	Predicted RBP	33.93	■■■■□ 3.02
PLXNA3-208	ENST00000495040		G3V3G9	751 aa		33.92	■■■■□ 3.02
PLXNA3-208	ENST00000495040	ATP2B4	P23634	1241 aa		33.92	■■■■□ 3.02
PLXNA3-208	ENST00000495040	CASP7	P55210	303 aa		33.92	■■■■□ 3.02
PLXNA3-208	ENST00000495040	DCAF8	Q5TAQ9	597 aa		33.92	■■■■□ 3.02
PLXNA3-208	ENST00000495040	ZBTB12	Q9Y330	459 aa	Predicted RBP	33.92	■■■■□ 3.02
PLXNA3-208	ENST00000495040	ZC3H15	Q8WU90	426 aa	Known RBP	33.91	■■■■□ 3.02
PLXNA3-208	ENST00000495040	SPEF2	Q9C093	1822 aa		33.9	■■■■□ 3.02
PLXNA3-208	ENST00000495040	RPS12	P25398	132 aa	Known RBP	33.9	■■■■□ 3.02
PLXNA3-208	ENST00000495040	MICALL2	Q8IY33	904 aa		33.9	■■■■□ 3.02
PLXNA3-208	ENST00000495040	PGAP2	Q9UHJ9	254 aa		33.9	■■■■□ 3.02
PLXNA3-208	ENST00000495040	TRPM7	Q96QT4	1865 aa		33.9	■■■■□ 3.02
PLXNA3-208	ENST00000495040		F6X3S4	739 aa		33.89	■■■■□ 3.02
PLXNA3-208	ENST00000495040	KCNQ5	Q9NR82	932 aa		33.89	■■■■□ 3.02
PLXNA3-208	ENST00000495040	MINPP1	Q9UNW1	487 aa		33.89	■■■■□ 3.02
PLXNA3-208	ENST00000495040	IGHMBP2	P38935	993 aa	Known RBP	33.88	■■■■□ 3.01
PLXNA3-208	ENST00000495040	HIRA	P54198	1017 aa	Predicted RBP	33.88	■■■■□ 3.01
PLXNA3-208	ENST00000495040	BEND3	Q5T5X7	828 aa		33.88	■■■■□ 3.01
PLXNA3-208	ENST00000495040	SCN9A	Q15858	1988 aa		33.88	■■■■□ 3.01
PLXNA3-208	ENST00000495040	CSF1R	P07333	972 aa		33.87	■■■■□ 3.01
PLXNA3-208	ENST00000495040	HSPA1A	P0DMV8	641 aa	Known RBP	33.87	■■■■□ 3.01
PLXNA3-208	ENST00000495040	HSPA1B	P0DMV9	641 aa	Known RBP	33.87	■■■■□ 3.01
PLXNA3-208	ENST00000495040	TRPM4	Q8TD43	1214 aa		33.87	■■■■□ 3.01
PLXNA3-208	ENST00000495040	SHTN1	A0MZ66	631 aa		33.86	■■■■□ 3.01
PLXNA3-208	ENST00000495040	ITGA6	P23229	1130 aa		33.86	■■■■□ 3.01
PLXNA3-208	ENST00000495040	DEFB115	Q30KQ5	88 aa		33.86	■■■■□ 3.01
PLXNA3-208	ENST00000495040	IFFO2	Q5TF58	517 aa		33.86	■■■■□ 3.01
PLXNA3-208	ENST00000495040	ABT1	Q9ULW3	272 aa	Known RBP	33.86	■■■■□ 3.01
PLXNA3-208	ENST00000495040	RASSF10	A6NK89	507 aa		33.85	■■■■□ 3.01
PLXNA3-208	ENST00000495040	TRAF5	O00463	557 aa		33.85	■■■■□ 3.01
PLXNA3-208	ENST00000495040	VIL1	P09327	827 aa	Known RBP	33.85	■■■■□ 3.01
PLXNA3-208	ENST00000495040	FMR1	Q06787	632 aa	Known RBP eCLIP	33.85	■■■■□ 3.01
PLXNA3-208	ENST00000495040	VEGFB	P49765	207 aa		33.84	■■■■□ 3.01
PLXNA3-208	ENST00000495040	FAM161A	Q3B820	660 aa		33.84	■■■■□ 3.01
PLXNA3-208	ENST00000495040	PSME4	Q14997	1843 aa		33.82	■■■■□ 3
PLXNA3-208	ENST00000495040		E9PSI1	815 aa		33.82	■■■■□ 3
PLXNA3-208	ENST00000495040	CCT4	P50991	539 aa	Known RBP	33.82	■■■■□ 3
PLXNA3-208	ENST00000495040	PODN	Q7Z5L7	613 aa		33.82	■■■■□ 3
PLXNA3-208	ENST00000495040	MPHOSPH8	Q99549	860 aa		33.82	■■■■□ 3
PLXNA3-208	ENST00000495040	MED23	Q9ULK4	1368 aa		33.82	■■■■□ 3
PLXNA3-208	ENST00000495040	CST9	Q5W186	159 aa		33.81	■■■■□ 3
PLXNA3-208	ENST00000495040	CDC37L1	Q7L3B6	337 aa		33.81	■■■■□ 3
PLXNA3-208	ENST00000495040	SAMD7	Q7Z3H4	446 aa		33.81	■■■■□ 3
PLXNA3-208	ENST00000495040	GLIS2	Q9BZE0	524 aa	Predicted RBP	33.81	■■■■□ 3
PLXNA3-208	ENST00000495040	ANKRD2	Q9GZV1	360 aa		33.8	■■■■□ 3
PLXNA3-208	ENST00000495040	LEMD3	Q9Y2U8	911 aa		33.8	■■■■□ 3
PLXNA3-208	ENST00000495040	ANKRD18B	A2A2Z9	1011 aa		33.79	■■■■□ 3
PLXNA3-208	ENST00000495040	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	33.79	■■■■□ 3
PLXNA3-208	ENST00000495040	GRM8	O00222	908 aa		33.78	■■■■□ 3
PLXNA3-208	ENST00000495040	ALDH1L1	O75891	902 aa		33.78	■■■■□ 3
PLXNA3-208	ENST00000495040	FOXO4	P98177	505 aa		33.78	■■■■□ 3
PLXNA3-208	ENST00000495040	AGBL3	Q8NEM8	1001 aa		33.78	■■■■□ 3
PLXNA3-208	ENST00000495040	ZNF609	O15014	1411 aa		33.78	■■■■□ 3
PLXNA3-208	ENST00000495040	WTIP	A6NIX2	430 aa	Predicted RBP	33.77	■■■■□ 3
PLXNA3-208	ENST00000495040	RSBN1L	Q6PCB5	846 aa	Predicted RBP	33.77	■■■■□ 3
PLXNA3-208	ENST00000495040	SLC4A10	Q6U841	1118 aa		33.77	■■■■□ 3
PLXNA3-208	ENST00000495040	CELF2	O95319	508 aa	Known RBP	33.76	■■■□□ 2.99
PLXNA3-208	ENST00000495040	IFIT5	Q13325	482 aa	Known RBP	33.76	■■■□□ 2.99
PLXNA3-208	ENST00000495040	RBM26	Q5T8P6	1007 aa	Known RBP	33.76	■■■□□ 2.99
PLXNA3-208	ENST00000495040	SRCIN1	Q9C0H9	1055 aa		33.76	■■■□□ 2.99
PLXNA3-208	ENST00000495040	C9orf78	Q9NZ63	289 aa	Predicted RBP	33.76	■■■□□ 2.99
PLXNA3-208	ENST00000495040	POLR2A	P24928	1970 aa	Known RBP	33.75	■■■□□ 2.99
PLXNA3-208	ENST00000495040	USP17L3	A6NCW0	530 aa		33.75	■■■□□ 2.99
PLXNA3-208	ENST00000495040	USP17L4	A6NCW7	530 aa		33.75	■■■□□ 2.99
PLXNA3-208	ENST00000495040	EGFR	P00533	1210 aa		33.75	■■■□□ 2.99
PLXNA3-208	ENST00000495040	SLFN5	Q08AF3	891 aa		33.75	■■■□□ 2.99
PLXNA3-208	ENST00000495040	USP17L1	Q7RTZ2	530 aa		33.75	■■■□□ 2.99
PLXNA3-208	ENST00000495040	TLL2	Q9Y6L7	1015 aa		33.75	■■■□□ 2.99
PLXNA3-208	ENST00000495040	WDR33	Q9C0J8	1336 aa	Known RBP	33.75	■■■□□ 2.99
PLXNA3-208	ENST00000495040	CCER2	I3L3R5	266 aa		33.74	■■■□□ 2.99
PLXNA3-208	ENST00000495040	COL13A1	Q5TAT6	717 aa	Predicted RBP	33.74	■■■□□ 2.99
PLXNA3-208	ENST00000495040	CHMP3	Q9Y3E7	222 aa		33.74	■■■□□ 2.99
PLXNA3-208	ENST00000495040	ZNF804B	A4D1E1	1349 aa		33.74	■■■□□ 2.99
PLXNA3-208	ENST00000495040	KIF4B	Q2VIQ3	1234 aa		33.73	■■■□□ 2.99
PLXNA3-208	ENST00000495040	MRPL50	Q8N5N7	158 aa	Known RBP	33.73	■■■□□ 2.99
PLXNA3-208	ENST00000495040	COA1	Q9GZY4	146 aa		33.73	■■■□□ 2.99
PLXNA3-208	ENST00000495040	CHRND	Q07001	517 aa		33.72	■■■□□ 2.99
PLXNA3-208	ENST00000495040	LMBR1L	Q6UX01	489 aa		33.72	■■■□□ 2.99
PLXNA3-208	ENST00000495040	USP48	Q86UV5	1035 aa		33.72	■■■□□ 2.99
PLXNA3-208	ENST00000495040	ECE1	P42892	770 aa		33.71	■■■□□ 2.99
PLXNA3-208	ENST00000495040	ZNF280A	P59817	542 aa	Predicted RBP	33.71	■■■□□ 2.99
PLXNA3-208	ENST00000495040	DCPS	Q96C86	337 aa	Known RBP	33.71	■■■□□ 2.99
PLXNA3-208	ENST00000495040	GML	Q99445	158 aa		33.71	■■■□□ 2.99

Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms