RNA–Protein interactions for RNA: ENST00000494917.6

CCDC180-206, Transcript of coiled-coil domain containing 180, humanhuman

TSL 1 (best)

Gene CCDC180, Length 2,781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-206ENST00000494917 COL9A3Q14050 684 aaPredicted RBP13.2□□□□□ -0.3
CCDC180-206ENST00000494917 MEX3CQ5U5Q3 659 aaKnown RBP13.2□□□□□ -0.3
CCDC180-206ENST00000494917 PRPF40BQ6NWY9 871 aaKnown RBP13.2□□□□□ -0.3
CCDC180-206ENST00000494917 NCLP19338 710 aaKnown RBP13.19□□□□□ -0.3
CCDC180-206ENST00000494917 MCTP1Q6DN14 999 aa13.19□□□□□ -0.3
CCDC180-206ENST00000494917 HAUS7Q99871 368 aa13.19□□□□□ -0.3
CCDC180-206ENST00000494917 GOLIM4O00461 696 aa13.19□□□□□ -0.3
CCDC180-206ENST00000494917 PKP1Q13835 747 aa13.19□□□□□ -0.3
CCDC180-206ENST00000494917 ADCK5Q3MIX3 580 aa13.19□□□□□ -0.3
CCDC180-206ENST00000494917 LDHAL6AQ6ZMR3 332 aa13.19□□□□□ -0.3
CCDC180-206ENST00000494917 CCDC129Q6ZRS4 1044 aa13.19□□□□□ -0.3
CCDC180-206ENST00000494917 SMARCC1Q92922 1105 aaPredicted RBP13.19□□□□□ -0.3
CCDC180-206ENST00000494917 TMX3Q96JJ7 454 aa13.19□□□□□ -0.3
CCDC180-206ENST00000494917 SPATA31A6Q5VVP1 1343 aa13.18□□□□□ -0.3
CCDC180-206ENST00000494917 CCDC171Q6TFL3 1326 aa13.18□□□□□ -0.3
CCDC180-206ENST00000494917 ZNF609O15014 1411 aa13.18□□□□□ -0.3
CCDC180-206ENST00000494917 CAVIN1Q6NZI2 390 aaKnown RBP13.18□□□□□ -0.3
CCDC180-206ENST00000494917 GPR108Q9NPR9 543 aa13.18□□□□□ -0.3
CCDC180-206ENST00000494917 SNRKQ9NRH2 765 aa13.18□□□□□ -0.3
CCDC180-206ENST00000494917 TAF6LQ9Y6J9 622 aa13.18□□□□□ -0.3
CCDC180-206ENST00000494917 PDE8AO60658 829 aa13.18□□□□□ -0.3
CCDC180-206ENST00000494917 NIP7Q9Y221 180 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCDC180-206ENST00000494917 RIPOR2Q9Y4F9 1068 aa13.18□□□□□ -0.3
CCDC180-206ENST00000494917 ZSCAN23Q3MJ62 389 aa13.17□□□□□ -0.3
CCDC180-206ENST00000494917 XAGE2Q96GT9 111 aa13.17□□□□□ -0.3
CCDC180-206ENST00000494917 RBM8AQ9Y5S9 174 aaKnown RBP13.17□□□□□ -0.3
CCDC180-206ENST00000494917 AFF2P51816 1311 aa13.17□□□□□ -0.3
CCDC180-206ENST00000494917 HELBQ8NG08 1087 aaPredicted RBP13.17□□□□□ -0.3
CCDC180-206ENST00000494917 IL17RAQ96F46 866 aa13.17□□□□□ -0.3
CCDC180-206ENST00000494917 MAP7D2Q96T17 732 aa13.17□□□□□ -0.3
CCDC180-206ENST00000494917 NOL7Q9UMY1 257 aaKnown RBP13.17□□□□□ -0.3
CCDC180-206ENST00000494917 MYH3P11055 1940 aa13.16□□□□□ -0.3
CCDC180-206ENST00000494917 ANKRD18BA2A2Z9 1011 aa13.16□□□□□ -0.3
CCDC180-206ENST00000494917 HIP1O00291 1037 aa13.16□□□□□ -0.3
CCDC180-206ENST00000494917 EPB41L2O43491 1005 aaKnown RBP13.16□□□□□ -0.3
CCDC180-206ENST00000494917 DTNBO60941 627 aa13.16□□□□□ -0.3
CCDC180-206ENST00000494917 IFIT1P09914 478 aaKnown RBP13.16□□□□□ -0.3
CCDC180-206ENST00000494917 SCARF1Q14162 830 aa13.16□□□□□ -0.3
CCDC180-206ENST00000494917 NECTIN1Q15223 517 aa13.16□□□□□ -0.3
CCDC180-206ENST00000494917 METTL24Q5JXM2 366 aa13.16□□□□□ -0.3
CCDC180-206ENST00000494917 PI16Q6UXB8 463 aa13.16□□□□□ -0.3
CCDC180-206ENST00000494917 MAP4K1Q92918 833 aa13.16□□□□□ -0.3
CCDC180-206ENST00000494917 GJD4Q96KN9 370 aaPredicted RBP13.16□□□□□ -0.3
CCDC180-206ENST00000494917 SEC31BQ9NQW1 1179 aa13.16□□□□□ -0.3
CCDC180-206ENST00000494917 CNNM1Q9NRU3 951 aa13.16□□□□□ -0.3
CCDC180-206ENST00000494917 PAG1Q9NWQ8 432 aa13.16□□□□□ -0.3
CCDC180-206ENST00000494917 SNAP23O00161 211 aa13.16□□□□□ -0.3
CCDC180-206ENST00000494917 CASTP20810 708 aaKnown RBP13.16□□□□□ -0.3
CCDC180-206ENST00000494917 KCNJ4P48050 445 aa13.16□□□□□ -0.3
CCDC180-206ENST00000494917 MED23Q9ULK4 1368 aa13.16□□□□□ -0.3
CCDC180-206ENST00000494917 RIC1Q4ADV7 1423 aa13.16□□□□□ -0.3
CCDC180-206ENST00000494917 FKBP4Q02790 459 aaKnown RBP eCLIP13.15□□□□□ -0.3
CCDC180-206ENST00000494917 GORABQ5T7V8 394 aa13.15□□□□□ -0.3
CCDC180-206ENST00000494917 AMIGO3Q86WK7 504 aa13.15□□□□□ -0.3
CCDC180-206ENST00000494917 UTP14AQ9BVJ6 771 aaKnown RBP13.15□□□□□ -0.3
CCDC180-206ENST00000494917 CWC22Q9HCG8 908 aaKnown RBP13.15□□□□□ -0.3
CCDC180-206ENST00000494917 LMBRD1Q9NUN5 540 aa13.15□□□□□ -0.3
CCDC180-206ENST00000494917 SH3TC1Q8TE82 1336 aa13.15□□□□□ -0.3
CCDC180-206ENST00000494917 ZNF500O60304 480 aaPredicted RBP13.15□□□□□ -0.3
CCDC180-206ENST00000494917 CREB3L3Q68CJ9 461 aa13.15□□□□□ -0.3
CCDC180-206ENST00000494917 BICDL1Q6ZP65 573 aa13.15□□□□□ -0.3
CCDC180-206ENST00000494917 KBTBD3Q8NAB2 608 aa13.15□□□□□ -0.3
CCDC180-206ENST00000494917 R3HCC1Q9Y3T6 440 aaKnown RBP13.15□□□□□ -0.3
CCDC180-206ENST00000494917 TAF5LO75529 589 aa13.15□□□□□ -0.31
CCDC180-206ENST00000494917 CYP2E1P05181 493 aaPredicted RBP13.15□□□□□ -0.31
CCDC180-206ENST00000494917 PDLIM2Q96JY6 352 aa13.15□□□□□ -0.31
CCDC180-206ENST00000494917 JAKMIP1Q96N16 626 aaKnown RBP13.15□□□□□ -0.31
CCDC180-206ENST00000494917 NTSR2O95665 410 aa13.14□□□□□ -0.31
CCDC180-206ENST00000494917 AK2P54819 239 aa13.14□□□□□ -0.31
CCDC180-206ENST00000494917 TTC14Q96N46 770 aa13.14□□□□□ -0.31
CCDC180-206ENST00000494917 COL5A3P25940 1745 aaPredicted RBP13.14□□□□□ -0.31
CCDC180-206ENST00000494917 RREB1Q92766 1687 aa13.14□□□□□ -0.31
CCDC180-206ENST00000494917 SLC27A2O14975 620 aa13.14□□□□□ -0.31
CCDC180-206ENST00000494917 ATP2B3Q16720 1220 aa13.14□□□□□ -0.31
CCDC180-206ENST00000494917 RBSNQ9H1K0 784 aa13.14□□□□□ -0.31
CCDC180-206ENST00000494917 SRP68Q9UHB9 627 aaKnown RBP13.14□□□□□ -0.31
CCDC180-206ENST00000494917 CSPP1Q1MSJ5 1256 aa13.13□□□□□ -0.31
CCDC180-206ENST00000494917 TTC39AQ5SRH9 613 aa13.13□□□□□ -0.31
CCDC180-206ENST00000494917 VGLL2Q8N8G2 317 aa13.13□□□□□ -0.31
CCDC180-206ENST00000494917 TCEANC2Q96MN5 208 aa13.13□□□□□ -0.31
CCDC180-206ENST00000494917 FBXO3Q9UK99 471 aa13.13□□□□□ -0.31
CCDC180-206ENST00000494917 AKAP2Q9Y2D5 859 aa13.13□□□□□ -0.31
CCDC180-206ENST00000494917 BTAF1O14981 1849 aa13.13□□□□□ -0.31
CCDC180-206ENST00000494917 RBM10P98175 930 aaKnown RBP13.13□□□□□ -0.31
CCDC180-206ENST00000494917 CCDC158Q5M9N0 1113 aa13.13□□□□□ -0.31
CCDC180-206ENST00000494917 VPS53Q5VIR6 699 aa13.13□□□□□ -0.31
CCDC180-206ENST00000494917 FOXD4L5Q5VV16 416 aaPredicted RBP13.13□□□□□ -0.31
CCDC180-206ENST00000494917 RUFY3Q7L099 469 aa13.13□□□□□ -0.31
CCDC180-206ENST00000494917 FOXD4L4Q8WXT5 416 aaPredicted RBP13.13□□□□□ -0.31
CCDC180-206ENST00000494917 CHAMP1Q96JM3 812 aa13.13□□□□□ -0.31
CCDC180-206ENST00000494917 MCM5P33992 734 aa13.12□□□□□ -0.31
CCDC180-206ENST00000494917 ZAP70P43403 619 aa13.12□□□□□ -0.31
CCDC180-206ENST00000494917 C3orf67Q6ZVT6 689 aa13.12□□□□□ -0.31
CCDC180-206ENST00000494917 SEPT12Q8IYM1 358 aa13.12□□□□□ -0.31
CCDC180-206ENST00000494917 KCNB2Q92953 911 aa13.12□□□□□ -0.31
CCDC180-206ENST00000494917 THSD7AQ9UPZ6 1657 aa13.12□□□□□ -0.31
CCDC180-206ENST00000494917 ZDHHC9Q9Y397 364 aa13.12□□□□□ -0.31
CCDC180-206ENST00000494917 MCMDC2Q4G0Z9 681 aa13.12□□□□□ -0.31
CCDC180-206ENST00000494917 PARP10Q53GL7 1025 aa13.12□□□□□ -0.31
CCDC180-206ENST00000494917 BCL2L12Q9HB09 334 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms