RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 PRAMEF22A3QJZ6 481 aa18.03■□□□□ 0.48
SDF4-207ENST00000494748 NBPF6Q5VWK0 638 aa18.03■□□□□ 0.48
SDF4-207ENST00000494748 Q6ZUG5 572 aa18.03■□□□□ 0.48
SDF4-207ENST00000494748 CCAR1Q8IX12 1150 aaKnown RBP18.03■□□□□ 0.48
SDF4-207ENST00000494748 NBPF4Q96M43 638 aa18.03■□□□□ 0.48
SDF4-207ENST00000494748 L2HGDHQ9H9P8 463 aa18.03■□□□□ 0.48
SDF4-207ENST00000494748 GOLGA6L19H0YKK7 550 aa18.03■□□□□ 0.48
SDF4-207ENST00000494748 TRMT1Q9NXH9 659 aaKnown RBP18.03■□□□□ 0.48
SDF4-207ENST00000494748 CFAP45Q9UL16 551 aa18.03■□□□□ 0.48
SDF4-207ENST00000494748 AMOTL2Q9Y2J4 779 aa18.03■□□□□ 0.48
SDF4-207ENST00000494748 CTAGE5O15320 804 aa18.03■□□□□ 0.48
SDF4-207ENST00000494748 H2AFXP16104 143 aaPredicted RBP18.03■□□□□ 0.48
SDF4-207ENST00000494748 OSBPL5Q9H0X9 879 aaPredicted RBP18.03■□□□□ 0.48
SDF4-207ENST00000494748 DDX60Q8IY21 1712 aaKnown RBP18.02■□□□□ 0.48
SDF4-207ENST00000494748 GRM8O00222 908 aa18.02■□□□□ 0.48
SDF4-207ENST00000494748 CCDC93Q567U6 631 aa18.02■□□□□ 0.48
SDF4-207ENST00000494748 E4F1Q66K89 784 aaPredicted RBP18.02■□□□□ 0.48
SDF4-207ENST00000494748 NEK1Q96PY6 1258 aa18.02■□□□□ 0.48
SDF4-207ENST00000494748 ANKARQ7Z5J8 1434 aa18.02■□□□□ 0.48
SDF4-207ENST00000494748 FAM69CQ0P6D2 419 aa18.02■□□□□ 0.48
SDF4-207ENST00000494748 STOX1Q6ZVD7 989 aa18.02■□□□□ 0.48
SDF4-207ENST00000494748 NSUN7Q8NE18 718 aaKnown RBP18.02■□□□□ 0.48
SDF4-207ENST00000494748 CEBPZQ03701 1054 aaKnown RBP18.02■□□□□ 0.47
SDF4-207ENST00000494748 KLHDC4Q8TBB5 520 aa18.02■□□□□ 0.47
SDF4-207ENST00000494748 USP28Q96RU2 1077 aa18.02■□□□□ 0.47
SDF4-207ENST00000494748 SALL1Q9NSC2 1324 aa18.02■□□□□ 0.47
SDF4-207ENST00000494748 BTBD11A6QL63 1104 aa18.01■□□□□ 0.47
SDF4-207ENST00000494748 CYP21A2P08686 494 aa18.01■□□□□ 0.47
SDF4-207ENST00000494748 TMEM51Q9NW97 253 aa18.01■□□□□ 0.47
SDF4-207ENST00000494748 NAA16Q6N069 864 aaPredicted RBP18.01■□□□□ 0.47
SDF4-207ENST00000494748 FILIP1Q7Z7B0 1213 aa18.01■□□□□ 0.47
SDF4-207ENST00000494748 SLU7O95391 586 aaKnown RBP18.01■□□□□ 0.47
SDF4-207ENST00000494748 PFKFB2O60825 505 aa18■□□□□ 0.47
SDF4-207ENST00000494748 KRT32Q14532 448 aa18■□□□□ 0.47
SDF4-207ENST00000494748 CYB5RLQ6IPT4 315 aa18■□□□□ 0.47
SDF4-207ENST00000494748 ERCC4Q92889 916 aaPredicted RBP18■□□□□ 0.47
SDF4-207ENST00000494748 G3BP1Q13283 466 aaKnown RBP eCLIP18■□□□□ 0.47
SDF4-207ENST00000494748 CCDC129Q6ZRS4 1044 aa18■□□□□ 0.47
SDF4-207ENST00000494748 LINS1Q8NG48 757 aa18■□□□□ 0.47
SDF4-207ENST00000494748 IGKV5-2P06315 115 aa17.99■□□□□ 0.47
SDF4-207ENST00000494748 AOPEPQ8N6M6 819 aa17.99■□□□□ 0.47
SDF4-207ENST00000494748 LLPHQ9BRT6 129 aaKnown RBP17.99■□□□□ 0.47
SDF4-207ENST00000494748 SIL1Q9H173 461 aa17.99■□□□□ 0.47
SDF4-207ENST00000494748 AFDNP55196 1824 aaKnown RBP17.99■□□□□ 0.47
SDF4-207ENST00000494748 OVOS2A0A0G2JMS6 1433 aa17.99■□□□□ 0.47
SDF4-207ENST00000494748 FAM160A1Q05DH4 1040 aa17.99■□□□□ 0.47
SDF4-207ENST00000494748 ARMCX5Q6P1M9 558 aa17.99■□□□□ 0.47
SDF4-207ENST00000494748 RFX7Q2KHR2 1363 aa17.99■□□□□ 0.47
SDF4-207ENST00000494748 CAMTA1Q9Y6Y1 1673 aa17.99■□□□□ 0.47
SDF4-207ENST00000494748 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.99■□□□□ 0.47
SDF4-207ENST00000494748 H3BQV1 296 aa17.99■□□□□ 0.47
SDF4-207ENST00000494748 PDIA6Q15084 440 aa17.99■□□□□ 0.47
SDF4-207ENST00000494748 EPHA10Q5JZY3 1008 aa17.99■□□□□ 0.47
SDF4-207ENST00000494748 IFFO2Q5TF58 517 aa17.99■□□□□ 0.47
SDF4-207ENST00000494748 SEC62Q99442 399 aaKnown RBP17.99■□□□□ 0.47
SDF4-207ENST00000494748 LRRC2Q9BYS8 371 aa17.99■□□□□ 0.47
SDF4-207ENST00000494748 FHOD1Q9Y613 1164 aa17.99■□□□□ 0.47
SDF4-207ENST00000494748 ARHGAP23Q9P227 1491 aa17.98■□□□□ 0.47
SDF4-207ENST00000494748 FMR1NBQ8N0W7 255 aaPredicted RBP17.98■□□□□ 0.47
SDF4-207ENST00000494748 PPP1R13BQ96KQ4 1090 aa17.98■□□□□ 0.47
SDF4-207ENST00000494748 ANO10Q9NW15 660 aa17.98■□□□□ 0.47
SDF4-207ENST00000494748 GTF2E1P29083 439 aaPredicted RBP17.98■□□□□ 0.47
SDF4-207ENST00000494748 CHMP4AQ9BY43 222 aa17.98■□□□□ 0.47
SDF4-207ENST00000494748 DBNLQ9UJU6 430 aaKnown RBP17.98■□□□□ 0.47
SDF4-207ENST00000494748 NDUFB9Q9Y6M9 179 aa17.98■□□□□ 0.47
SDF4-207ENST00000494748 AKAP4Q5JQC9 854 aa17.98■□□□□ 0.47
SDF4-207ENST00000494748 MPRIPQ6WCQ1 1025 aa17.98■□□□□ 0.47
SDF4-207ENST00000494748 IP6K1Q92551 441 aa17.98■□□□□ 0.47
SDF4-207ENST00000494748 AGXT2Q9BYV1 514 aa17.98■□□□□ 0.47
SDF4-207ENST00000494748 ZBTB22O15209 634 aa17.97■□□□□ 0.47
SDF4-207ENST00000494748 ATP5JP18859 108 aa17.97■□□□□ 0.47
SDF4-207ENST00000494748 NWD2Q9ULI1 1742 aa17.97■□□□□ 0.47
SDF4-207ENST00000494748 ABTB2Q8N961 1025 aa17.97■□□□□ 0.47
SDF4-207ENST00000494748 IMPACTQ9P2X3 320 aa17.97■□□□□ 0.47
SDF4-207ENST00000494748 GSDMDP57764 484 aa17.96■□□□□ 0.47
SDF4-207ENST00000494748 FANCGO15287 622 aa17.96■□□□□ 0.47
SDF4-207ENST00000494748 RNMTO43148 476 aaKnown RBP17.96■□□□□ 0.47
SDF4-207ENST00000494748 ERCC6LQ2NKX8 1250 aa17.96■□□□□ 0.47
SDF4-207ENST00000494748 PTPDC1A2A3K4 754 aa17.95■□□□□ 0.46
SDF4-207ENST00000494748 BECN2A8MW95 431 aa17.95■□□□□ 0.46
SDF4-207ENST00000494748 RFX5P48382 616 aaPredicted RBP17.95■□□□□ 0.46
SDF4-207ENST00000494748 KCNJ6P48051 423 aa17.95■□□□□ 0.46
SDF4-207ENST00000494748 EXOSC10Q01780 885 aaKnown RBP17.95■□□□□ 0.46
SDF4-207ENST00000494748 U3KPZ7 1027 aaPredicted RBP17.95■□□□□ 0.46
SDF4-207ENST00000494748 KIF2AO00139 706 aaPredicted RBP17.95■□□□□ 0.46
SDF4-207ENST00000494748 FOSBP53539 338 aa17.95■□□□□ 0.46
SDF4-207ENST00000494748 TEFQ10587 303 aa17.95■□□□□ 0.46
SDF4-207ENST00000494748 DPCR1Q3MIW9 517 aa17.95■□□□□ 0.46
SDF4-207ENST00000494748 CEP57L1Q8IYX8 460 aa17.95■□□□□ 0.46
SDF4-207ENST00000494748 FSIP1Q8NA03 581 aa17.95■□□□□ 0.46
SDF4-207ENST00000494748 BPIFA3Q9BQP9 254 aa17.95■□□□□ 0.46
SDF4-207ENST00000494748 HDAC5Q9UQL6 1122 aa17.95■□□□□ 0.46
SDF4-207ENST00000494748 HSP90B1P14625 803 aaKnown RBP17.94■□□□□ 0.46
SDF4-207ENST00000494748 CLCN6P51797 869 aa17.94■□□□□ 0.46
SDF4-207ENST00000494748 ATL3Q6DD88 541 aa17.94■□□□□ 0.46
SDF4-207ENST00000494748 SYTL4Q96C24 671 aaPredicted RBP17.94■□□□□ 0.46
SDF4-207ENST00000494748 PCDHA7Q9UN72 937 aa17.94■□□□□ 0.46
SDF4-207ENST00000494748 A0A0G2JLW4 131 aa17.94■□□□□ 0.46
SDF4-207ENST00000494748 KINO60870 393 aaKnown RBP17.94■□□□□ 0.46
SDF4-207ENST00000494748 CCDC73Q6ZRK6 1079 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms