RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 CCDC91Q7Z6B0 441 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 RPAINQ86UA6 219 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 CERS3Q8IU89 383 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 WDR63Q8IWG1 891 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 DZIP1LQ8IYY4 767 aaKnown RBP3.24□□□□□ -1.89
MDC1-208ENST00000494654 NFATC2IPQ8NCF5 419 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 RNF214Q8ND24 703 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 BANK1Q8NDB2 785 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 MNS1Q8NEH6 495 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 PRR7Q8TB68 274 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 GOLGA5Q8TBA6 731 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 EPS8L1Q8TE68 723 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 GCC1Q96CN9 775 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 USB1Q9BQ65 265 aaKnown RBP3.24□□□□□ -1.89
MDC1-208ENST00000494654 TACO1Q9BSH4 297 aaKnown RBP3.24□□□□□ -1.89
MDC1-208ENST00000494654 FUCA2Q9BTY2 467 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.24□□□□□ -1.89
MDC1-208ENST00000494654 PRR14Q9BWN1 585 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 MED4Q9NPJ6 270 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.24□□□□□ -1.89
MDC1-208ENST00000494654 KCND1Q9NSA2 647 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 NSFL1CQ9UNZ2 370 aaKnown RBP3.24□□□□□ -1.89
MDC1-208ENST00000494654 FCF1Q9Y324 198 aaKnown RBP3.24□□□□□ -1.89
MDC1-208ENST00000494654 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.24□□□□□ -1.89
MDC1-208ENST00000494654 V9GYY5 206 aaPredicted RBP3.24□□□□□ -1.89
MDC1-208ENST00000494654 ATP10DQ9P241 1426 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 MYH4Q9Y623 1939 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.24□□□□□ -1.89
MDC1-208ENST00000494654 KIF24Q5T7B8 1368 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 ARAP3Q8WWN8 1544 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 C3P01024 1663 aa3.24□□□□□ -1.89
MDC1-208ENST00000494654 AFDNP55196 1824 aaKnown RBP3.23□□□□□ -1.89
MDC1-208ENST00000494654 SPEF2Q9C093 1822 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 LAMB1P07942 1786 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 KDM3BQ7LBC6 1761 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 PTPRTO14522 1441 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 APAF1O14727 1248 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 NEMFO60524 1076 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 PRPF40AO75400 957 aaKnown RBP3.23□□□□□ -1.89
MDC1-208ENST00000494654 ZFYVE9O95405 1425 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 TNNT1P13805 278 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 MCM2P49736 904 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 RBM6P78332 1123 aaKnown RBP3.23□□□□□ -1.89
MDC1-208ENST00000494654 CTDSPL2Q05D32 466 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 TRDNQ13061 729 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 GPS2Q13227 327 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 SKIV2LQ15477 1246 aaKnown RBP3.23□□□□□ -1.89
MDC1-208ENST00000494654 CCDC88AQ3V6T2 1871 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 SH3D19Q5HYK7 790 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 RICTORQ6R327 1708 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 SYT10Q6XYQ8 523 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 CHD1LQ86WJ1 897 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 CCDC146Q8IYE0 955 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 C17orf53Q8N3J3 647 aaPredicted RBP3.23□□□□□ -1.89
MDC1-208ENST00000494654 FBXO18Q8NFZ0 1043 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 LRRN4Q8WUT4 740 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 INTS4Q96HW7 963 aaKnown RBP3.23□□□□□ -1.89
MDC1-208ENST00000494654 USP26Q9BXU7 913 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 UBXN6Q9BZV1 441 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 HMX1Q9NP08 348 aaPredicted RBP3.23□□□□□ -1.89
MDC1-208ENST00000494654 RBM28Q9NW13 759 aaKnown RBP3.23□□□□□ -1.89
MDC1-208ENST00000494654 BSDC1Q9NW68 430 aaPredicted RBP3.23□□□□□ -1.89
MDC1-208ENST00000494654 ARGLU1Q9NWB6 273 aaPredicted RBP3.23□□□□□ -1.89
MDC1-208ENST00000494654 MAP10Q9P2G4 905 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 TNNQ9UQP3 1299 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 ZDHHC9Q9Y397 364 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 RRP15Q9Y3B9 282 aaKnown RBP3.23□□□□□ -1.89
MDC1-208ENST00000494654 KNSTRNQ9Y448 316 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 TOPAZ1Q8N9V7 1692 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 ANKRD36CQ5JPF3 1778 aa3.23□□□□□ -1.89
MDC1-208ENST00000494654 NWD2Q9ULI1 1742 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 NSD3Q9BZ95 1437 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 LOC102724159A0A0B4J2E5 919 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 NUTM2BA6NNL0 878 aaPredicted RBP3.22□□□□□ -1.89
MDC1-208ENST00000494654 NUTM2EB1AL46 878 aaPredicted RBP3.22□□□□□ -1.89
MDC1-208ENST00000494654 RPS6KA5O75582 802 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 DXOO77932 396 aaKnown RBP3.22□□□□□ -1.89
MDC1-208ENST00000494654 CLSTN1O94985 981 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 ZRANB2O95218 330 aaKnown RBP eCLIP3.22□□□□□ -1.89
MDC1-208ENST00000494654 SLU7O95391 586 aaKnown RBP3.22□□□□□ -1.89
MDC1-208ENST00000494654 IVLP07476 585 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 PNMA6AP0CW24 399 aaPredicted RBP3.22□□□□□ -1.89
MDC1-208ENST00000494654 HCLS1P14317 486 aaPredicted RBP3.22□□□□□ -1.89
MDC1-208ENST00000494654 MX1P20591 662 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 CALRP27797 417 aaKnown RBP3.22□□□□□ -1.89
MDC1-208ENST00000494654 MAGEA9P43362 315 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 TDO2P48775 406 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 MMP16P51512 607 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 GSCP56915 257 aaPredicted RBP3.22□□□□□ -1.89
MDC1-208ENST00000494654 MTMR2Q13614 643 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 CUL4AQ13619 759 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 PKP1Q13835 747 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 PWP2Q15269 919 aaKnown RBP3.22□□□□□ -1.89
MDC1-208ENST00000494654 ELF2Q15723 593 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 ZSCAN26Q16670 478 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 IFFO2Q5TF58 517 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 NUTM2DQ5VT03 806 aaPredicted RBP3.22□□□□□ -1.89
MDC1-208ENST00000494654 INTS3Q68E01 1043 aaKnown RBP3.22□□□□□ -1.89
MDC1-208ENST00000494654 MCTP2Q6DN12 878 aa3.22□□□□□ -1.89
MDC1-208ENST00000494654 KRBA2Q6ZNG9 492 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms