RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 UBN2Q6ZU65 1347 aa13.33□□□□□ -0.28
ZIC4-216ENST00000494569 MCM4P33991 863 aa13.33□□□□□ -0.28
ZIC4-216ENST00000494569 PALLDQ8WX93 1383 aa13.33□□□□□ -0.28
ZIC4-216ENST00000494569 EYA2O00167 538 aa13.33□□□□□ -0.28
ZIC4-216ENST00000494569 IL15P40933 162 aaPredicted RBP13.33□□□□□ -0.28
ZIC4-216ENST00000494569 HSP90AB3PQ58FF7 597 aa13.33□□□□□ -0.28
ZIC4-216ENST00000494569 HAUS7Q99871 368 aa13.32□□□□□ -0.28
ZIC4-216ENST00000494569 TCHHQ07283 1943 aa13.32□□□□□ -0.28
ZIC4-216ENST00000494569 ZBTB7AO95365 584 aa13.32□□□□□ -0.28
ZIC4-216ENST00000494569 C1QTNF8P60827 252 aa13.32□□□□□ -0.28
ZIC4-216ENST00000494569 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.32□□□□□ -0.28
ZIC4-216ENST00000494569 FHDC1Q9C0D6 1143 aaPredicted RBP13.31□□□□□ -0.28
ZIC4-216ENST00000494569 ANO2Q9NQ90 1003 aa13.31□□□□□ -0.28
ZIC4-216ENST00000494569 SNX14Q9Y5W7 946 aa13.31□□□□□ -0.28
ZIC4-216ENST00000494569 LRRC24Q50LG9 513 aa13.31□□□□□ -0.28
ZIC4-216ENST00000494569 TNPO1Q92973 898 aaKnown RBP13.31□□□□□ -0.28
ZIC4-216ENST00000494569 LOC102724428A0A0B4J2F2 783 aa13.31□□□□□ -0.28
ZIC4-216ENST00000494569 HIP1O00291 1037 aa13.31□□□□□ -0.28
ZIC4-216ENST00000494569 SIK1P57059 783 aa13.31□□□□□ -0.28
ZIC4-216ENST00000494569 NECTIN1Q15223 517 aa13.31□□□□□ -0.28
ZIC4-216ENST00000494569 PTF1AQ7RTS3 328 aa13.31□□□□□ -0.28
ZIC4-216ENST00000494569 DBNDD2Q9BQY9 259 aa13.31□□□□□ -0.28
ZIC4-216ENST00000494569 PDGFDQ9GZP0 370 aaPredicted RBP13.31□□□□□ -0.28
ZIC4-216ENST00000494569 CCDC87Q9NVE4 849 aa13.31□□□□□ -0.28
ZIC4-216ENST00000494569 RGL2O15211 777 aa13.3□□□□□ -0.28
ZIC4-216ENST00000494569 CAMTA2O94983 1202 aa13.3□□□□□ -0.28
ZIC4-216ENST00000494569 RBM10P98175 930 aaKnown RBP13.3□□□□□ -0.28
ZIC4-216ENST00000494569 PTH1RQ03431 593 aa13.3□□□□□ -0.28
ZIC4-216ENST00000494569 AK7Q96M32 723 aa13.3□□□□□ -0.28
ZIC4-216ENST00000494569 TIAM2Q8IVF5 1701 aa13.3□□□□□ -0.28
ZIC4-216ENST00000494569 CRKLP46109 303 aaKnown RBP13.3□□□□□ -0.28
ZIC4-216ENST00000494569 MAP4K1Q92918 833 aa13.3□□□□□ -0.28
ZIC4-216ENST00000494569 ABCC12Q96J65 1359 aa13.3□□□□□ -0.28
ZIC4-216ENST00000494569 ST18O60284 1047 aa13.29□□□□□ -0.28
ZIC4-216ENST00000494569 MCCP23508 829 aa13.29□□□□□ -0.28
ZIC4-216ENST00000494569 NMIQ13287 307 aaPredicted RBP13.29□□□□□ -0.28
ZIC4-216ENST00000494569 TTLL11Q8NHH1 800 aa13.29□□□□□ -0.28
ZIC4-216ENST00000494569 PUS3Q9BZE2 481 aaKnown RBP13.29□□□□□ -0.28
ZIC4-216ENST00000494569 MCM2P49736 904 aa13.29□□□□□ -0.28
ZIC4-216ENST00000494569 CWC27Q6UX04 472 aaKnown RBP13.29□□□□□ -0.28
ZIC4-216ENST00000494569 RASEFQ8IZ41 740 aa13.29□□□□□ -0.28
ZIC4-216ENST00000494569 VGLL2Q8N8G2 317 aa13.29□□□□□ -0.28
ZIC4-216ENST00000494569 ZNF594Q96JF6 807 aaPredicted RBP13.29□□□□□ -0.28
ZIC4-216ENST00000494569 RTL9Q8NET4 1388 aa13.29□□□□□ -0.28
ZIC4-216ENST00000494569 CCDC171Q6TFL3 1326 aa13.29□□□□□ -0.28
ZIC4-216ENST00000494569 USPL1Q5W0Q7 1092 aa13.29□□□□□ -0.28
ZIC4-216ENST00000494569 DZIP3Q86Y13 1208 aaKnown RBP13.29□□□□□ -0.28
ZIC4-216ENST00000494569 SYNE4Q8N205 404 aa13.29□□□□□ -0.28
ZIC4-216ENST00000494569 RUFY2Q8WXA3 655 aa13.29□□□□□ -0.28
ZIC4-216ENST00000494569 FAM89AQ96GI7 184 aa13.29□□□□□ -0.28
ZIC4-216ENST00000494569 FAM227BQ96M60 508 aa13.29□□□□□ -0.28
ZIC4-216ENST00000494569 BOLA2Q9H3K6 86 aa13.29□□□□□ -0.28
ZIC4-216ENST00000494569 ATF5Q9Y2D1 282 aaPredicted RBP13.29□□□□□ -0.28
ZIC4-216ENST00000494569 RIPOR2Q9Y4F9 1068 aa13.29□□□□□ -0.28
ZIC4-216ENST00000494569 A0A0D9SFI3 127 aa13.28□□□□□ -0.28
ZIC4-216ENST00000494569 CTSWP56202 376 aa13.28□□□□□ -0.28
ZIC4-216ENST00000494569 SMARCC1Q92922 1105 aaPredicted RBP13.28□□□□□ -0.28
ZIC4-216ENST00000494569 ACSBG1Q96GR2 724 aa13.28□□□□□ -0.28
ZIC4-216ENST00000494569 TM6SF1Q9BZW5 370 aa13.28□□□□□ -0.28
ZIC4-216ENST00000494569 DLEC1Q9Y238 1755 aa13.28□□□□□ -0.28
ZIC4-216ENST00000494569 TSGA10IPQ3SY00 556 aa13.28□□□□□ -0.28
ZIC4-216ENST00000494569 ST3GAL1Q11201 340 aa13.27□□□□□ -0.28
ZIC4-216ENST00000494569 ALDH8A1Q9H2A2 487 aaPredicted RBP13.27□□□□□ -0.28
ZIC4-216ENST00000494569 DIAPH3Q9NSV4 1193 aa13.27□□□□□ -0.28
ZIC4-216ENST00000494569 CNTNAP4Q9C0A0 1308 aa13.27□□□□□ -0.29
ZIC4-216ENST00000494569 SLC16A10Q8TF71 515 aa13.27□□□□□ -0.29
ZIC4-216ENST00000494569 SYTL4Q96C24 671 aaPredicted RBP13.27□□□□□ -0.29
ZIC4-216ENST00000494569 CWC22Q9HCG8 908 aaKnown RBP13.27□□□□□ -0.29
ZIC4-216ENST00000494569 SH3TC1Q8TE82 1336 aa13.27□□□□□ -0.29
ZIC4-216ENST00000494569 ATP6V1AP38606 617 aa13.26□□□□□ -0.29
ZIC4-216ENST00000494569 COL9A3Q14050 684 aaPredicted RBP13.26□□□□□ -0.29
ZIC4-216ENST00000494569 TMX3Q96JJ7 454 aa13.26□□□□□ -0.29
ZIC4-216ENST00000494569 PKP1Q13835 747 aa13.26□□□□□ -0.29
ZIC4-216ENST00000494569 EDC3Q96F86 508 aaKnown RBP13.26□□□□□ -0.29
ZIC4-216ENST00000494569 INTS4Q96HW7 963 aaKnown RBP13.26□□□□□ -0.29
ZIC4-216ENST00000494569 ZNF512BQ96KM6 892 aaPredicted RBP13.26□□□□□ -0.29
ZIC4-216ENST00000494569 NEK4P51957 841 aa13.26□□□□□ -0.29
ZIC4-216ENST00000494569 IFFO2Q5TF58 517 aa13.26□□□□□ -0.29
ZIC4-216ENST00000494569 LINC00116Q8NCU8 138 aa13.26□□□□□ -0.29
ZIC4-216ENST00000494569 ZSWIM6Q9HCJ5 1215 aa13.26□□□□□ -0.29
ZIC4-216ENST00000494569 PDE8AO60658 829 aa13.25□□□□□ -0.29
ZIC4-216ENST00000494569 ZNF589Q86UQ0 364 aaPredicted RBP13.25□□□□□ -0.29
ZIC4-216ENST00000494569 KBTBD3Q8NAB2 608 aa13.25□□□□□ -0.29
ZIC4-216ENST00000494569 A0A1B0GUL7 405 aa13.25□□□□□ -0.29
ZIC4-216ENST00000494569 TAF5LO75529 589 aa13.25□□□□□ -0.29
ZIC4-216ENST00000494569 NTSR2O95665 410 aa13.25□□□□□ -0.29
ZIC4-216ENST00000494569 SUSD4Q5VX71 490 aa13.25□□□□□ -0.29
ZIC4-216ENST00000494569 GREM2Q9H772 168 aa13.25□□□□□ -0.29
ZIC4-216ENST00000494569 TBC1D2BQ9UPU7 963 aa13.25□□□□□ -0.29
ZIC4-216ENST00000494569 CDK11BP21127 795 aaKnown RBP13.24□□□□□ -0.29
ZIC4-216ENST00000494569 IRS4O14654 1257 aaPredicted RBP13.24□□□□□ -0.29
ZIC4-216ENST00000494569 TIMM10P62072 90 aa13.24□□□□□ -0.29
ZIC4-216ENST00000494569 CCDC57Q2TAC2 916 aa13.24□□□□□ -0.29
ZIC4-216ENST00000494569 ZGPATQ8N5A5 531 aaKnown RBP13.24□□□□□ -0.29
ZIC4-216ENST00000494569 GPTP24298 496 aa13.24□□□□□ -0.29
ZIC4-216ENST00000494569 MAST2Q6P0Q8 1798 aa13.24□□□□□ -0.29
ZIC4-216ENST00000494569 ITGA6P23229 1130 aa13.23□□□□□ -0.29
ZIC4-216ENST00000494569 RC3H1Q5TC82 1133 aaKnown RBP13.23□□□□□ -0.29
ZIC4-216ENST00000494569 FSD1Q9BTV5 496 aa13.23□□□□□ -0.29
ZIC4-216ENST00000494569 RBM8AQ9Y5S9 174 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms