RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 GOLIM4O00461 696 aa19.93■□□□□ 0.78
ATG4B-225ENST00000494465 RGL2O15211 777 aa19.93■□□□□ 0.78
ATG4B-225ENST00000494465 RPS6KA4O75676 772 aa19.93■□□□□ 0.78
ATG4B-225ENST00000494465 IFIT1P09914 478 aaKnown RBP19.93■□□□□ 0.78
ATG4B-225ENST00000494465 CCNL1Q9UK58 526 aaPredicted RBP19.93■□□□□ 0.78
ATG4B-225ENST00000494465 AKAP11Q9UKA4 1901 aa19.92■□□□□ 0.78
ATG4B-225ENST00000494465 MCM2P49736 904 aa19.92■□□□□ 0.78
ATG4B-225ENST00000494465 RBM8AQ9Y5S9 174 aaKnown RBP19.92■□□□□ 0.78
ATG4B-225ENST00000494465 EP400Q96L91 3159 aa19.92■□□□□ 0.78
ATG4B-225ENST00000494465 RTL9Q8NET4 1388 aa19.92■□□□□ 0.78
ATG4B-225ENST00000494465 ATP2B3Q16720 1220 aa19.92■□□□□ 0.78
ATG4B-225ENST00000494465 PRPF40BQ6NWY9 871 aaKnown RBP19.92■□□□□ 0.78
ATG4B-225ENST00000494465 QTRT2Q9H974 415 aaKnown RBP19.92■□□□□ 0.78
ATG4B-225ENST00000494465 TAF5LO75529 589 aa19.91■□□□□ 0.78
ATG4B-225ENST00000494465 AMIGO3Q86WK7 504 aa19.91■□□□□ 0.78
ATG4B-225ENST00000494465 IL27Q8NEV9 243 aa19.91■□□□□ 0.78
ATG4B-225ENST00000494465 TMX3Q96JJ7 454 aa19.91■□□□□ 0.78
ATG4B-225ENST00000494465 ARAP2Q8WZ64 1704 aa19.91■□□□□ 0.78
ATG4B-225ENST00000494465 BRWD3Q6RI45 1802 aa19.91■□□□□ 0.78
ATG4B-225ENST00000494465 PDE8BO95263 885 aa19.91■□□□□ 0.78
ATG4B-225ENST00000494465 TICAM2Q86XR7 235 aa19.91■□□□□ 0.78
ATG4B-225ENST00000494465 TTC14Q96N46 770 aa19.91■□□□□ 0.78
ATG4B-225ENST00000494465 SEC31BQ9NQW1 1179 aa19.91■□□□□ 0.78
ATG4B-225ENST00000494465 COL4A1P02462 1669 aa19.9■□□□□ 0.78
ATG4B-225ENST00000494465 C4BP0C0L5 1744 aa19.9■□□□□ 0.78
ATG4B-225ENST00000494465 COL24A1Q17RW2 1714 aa19.9■□□□□ 0.78
ATG4B-225ENST00000494465 ABCC12Q96J65 1359 aa19.9■□□□□ 0.78
ATG4B-225ENST00000494465 SCARF1Q14162 830 aa19.9■□□□□ 0.78
ATG4B-225ENST00000494465 RAB3GAP1Q15042 981 aa19.9■□□□□ 0.78
ATG4B-225ENST00000494465 CCDC158Q5M9N0 1113 aa19.9■□□□□ 0.78
ATG4B-225ENST00000494465 SEC62Q99442 399 aaKnown RBP19.9■□□□□ 0.78
ATG4B-225ENST00000494465 NARFQ9UHQ1 456 aa19.9■□□□□ 0.78
ATG4B-225ENST00000494465 C4AP0C0L4 1744 aa19.89■□□□□ 0.77
ATG4B-225ENST00000494465 GNPATO15228 680 aa19.89■□□□□ 0.77
ATG4B-225ENST00000494465 ADCK5Q3MIX3 580 aa19.89■□□□□ 0.77
ATG4B-225ENST00000494465 TTC39AQ5SRH9 613 aa19.89■□□□□ 0.77
ATG4B-225ENST00000494465 CREB3L3Q68CJ9 461 aa19.89■□□□□ 0.77
ATG4B-225ENST00000494465 CUL4AQ13619 759 aa19.88■□□□□ 0.77
ATG4B-225ENST00000494465 CCDC152Q4G0S7 254 aa19.88■□□□□ 0.77
ATG4B-225ENST00000494465 GORABQ5T7V8 394 aa19.88■□□□□ 0.77
ATG4B-225ENST00000494465 TBC1D9BQ66K14 1250 aa19.88■□□□□ 0.77
ATG4B-225ENST00000494465 ZGPATQ8N5A5 531 aaKnown RBP19.88■□□□□ 0.77
ATG4B-225ENST00000494465 SRP68Q9UHB9 627 aaKnown RBP19.88■□□□□ 0.77
ATG4B-225ENST00000494465 HSP90B1P14625 803 aaKnown RBP19.88■□□□□ 0.77
ATG4B-225ENST00000494465 SLFNL1Q499Z3 407 aa19.88■□□□□ 0.77
ATG4B-225ENST00000494465 MCMDC2Q4G0Z9 681 aa19.88■□□□□ 0.77
ATG4B-225ENST00000494465 USPL1Q5W0Q7 1092 aa19.88■□□□□ 0.77
ATG4B-225ENST00000494465 CCDC129Q6ZRS4 1044 aa19.88■□□□□ 0.77
ATG4B-225ENST00000494465 BCL11BQ9C0K0 894 aaPredicted RBP19.88■□□□□ 0.77
ATG4B-225ENST00000494465 MROH5Q6ZUA9 1318 aa19.88■□□□□ 0.77
ATG4B-225ENST00000494465 SLC27A2O14975 620 aa19.87■□□□□ 0.77
ATG4B-225ENST00000494465 FGFR2P21802 821 aa19.87■□□□□ 0.77
ATG4B-225ENST00000494465 ERFEQ4G0M1 354 aa19.87■□□□□ 0.77
ATG4B-225ENST00000494465 TM6SF1Q9BZW5 370 aa19.87■□□□□ 0.77
ATG4B-225ENST00000494465 MYH7P12883 1935 aa19.87■□□□□ 0.77
ATG4B-225ENST00000494465 TNPO1Q92973 898 aaKnown RBP19.87■□□□□ 0.77
ATG4B-225ENST00000494465 ZMYM1Q5SVZ6 1142 aa19.86■□□□□ 0.77
ATG4B-225ENST00000494465 ZNF512BQ96KM6 892 aaPredicted RBP19.86■□□□□ 0.77
ATG4B-225ENST00000494465 ZSWIM6Q9HCJ5 1215 aa19.86■□□□□ 0.77
ATG4B-225ENST00000494465 RPAP1Q9BWH6 1393 aaPredicted RBP19.86■□□□□ 0.77
ATG4B-225ENST00000494465 TAF1P21675 1872 aa19.86■□□□□ 0.77
ATG4B-225ENST00000494465 CPA1P15085 419 aa19.86■□□□□ 0.77
ATG4B-225ENST00000494465 CASTP20810 708 aaKnown RBP19.86■□□□□ 0.77
ATG4B-225ENST00000494465 MCM4P33991 863 aa19.86■□□□□ 0.77
ATG4B-225ENST00000494465 FKBP4Q02790 459 aaKnown RBP eCLIP19.86■□□□□ 0.77
ATG4B-225ENST00000494465 C3orf67Q6ZVT6 689 aa19.86■□□□□ 0.77
ATG4B-225ENST00000494465 CWC22Q9HCG8 908 aaKnown RBP19.86■□□□□ 0.77
ATG4B-225ENST00000494465 RTCBQ9Y3I0 505 aaKnown RBP19.86■□□□□ 0.77
ATG4B-225ENST00000494465 KCNJ4P48050 445 aa19.85■□□□□ 0.77
ATG4B-225ENST00000494465 NOL8Q76FK4 1167 aaKnown RBP19.85■□□□□ 0.77
ATG4B-225ENST00000494465 HELBQ8NG08 1087 aaPredicted RBP19.85■□□□□ 0.77
ATG4B-225ENST00000494465 HELLSQ9NRZ9 838 aa19.85■□□□□ 0.77
ATG4B-225ENST00000494465 TAF6LQ9Y6J9 622 aa19.85■□□□□ 0.77
ATG4B-225ENST00000494465 A0A1B0GUL6 1792 aa19.85■□□□□ 0.77
ATG4B-225ENST00000494465 ZKSCAN1P17029 563 aaPredicted RBP19.85■□□□□ 0.77
ATG4B-225ENST00000494465 MCAMP43121 646 aa19.85■□□□□ 0.77
ATG4B-225ENST00000494465 ZAP70P43403 619 aa19.85■□□□□ 0.77
ATG4B-225ENST00000494465 PUM3Q15397 648 aaKnown RBP19.85■□□□□ 0.77
ATG4B-225ENST00000494465 PI16Q6UXB8 463 aa19.85■□□□□ 0.77
ATG4B-225ENST00000494465 ARHGEF1Q92888 912 aaKnown RBP19.85■□□□□ 0.77
ATG4B-225ENST00000494465 JAKMIP1Q96N16 626 aaKnown RBP19.85■□□□□ 0.77
ATG4B-225ENST00000494465 LRRC4BQ9NT99 713 aa19.85■□□□□ 0.77
ATG4B-225ENST00000494465 RNF113AO15541 343 aaKnown RBP19.84■□□□□ 0.77
ATG4B-225ENST00000494465 SSFA2P28290 1259 aa19.84■□□□□ 0.77
ATG4B-225ENST00000494465 BICDL1Q6ZP65 573 aa19.84■□□□□ 0.77
ATG4B-225ENST00000494465 MPHOSPH8Q99549 860 aa19.84■□□□□ 0.77
ATG4B-225ENST00000494465 MYO5AQ9Y4I1 1855 aaKnown RBP19.84■□□□□ 0.77
ATG4B-225ENST00000494465 CYP2E1P05181 493 aaPredicted RBP19.84■□□□□ 0.77
ATG4B-225ENST00000494465 AK2P54819 239 aa19.84■□□□□ 0.77
ATG4B-225ENST00000494465 COL9A3Q14050 684 aaPredicted RBP19.84■□□□□ 0.77
ATG4B-225ENST00000494465 SF3B3Q15393 1217 aaKnown RBP19.84■□□□□ 0.77
ATG4B-225ENST00000494465 TSGA10IPQ3SY00 556 aa19.84■□□□□ 0.77
ATG4B-225ENST00000494465 SLC10A5Q5PT55 438 aa19.84■□□□□ 0.77
ATG4B-225ENST00000494465 LPIN2Q92539 896 aa19.84■□□□□ 0.77
ATG4B-225ENST00000494465 ZPR1O75312 459 aa19.83■□□□□ 0.76
ATG4B-225ENST00000494465 RUFY3Q7L099 469 aa19.83■□□□□ 0.76
ATG4B-225ENST00000494465 INTS4Q96HW7 963 aaKnown RBP19.83■□□□□ 0.76
ATG4B-225ENST00000494465 UBR3Q6ZT12 1888 aa19.82■□□□□ 0.76
ATG4B-225ENST00000494465 MAST3O60307 1309 aa19.82■□□□□ 0.76
ATG4B-225ENST00000494465 ARID4AP29374 1257 aaPredicted RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms