RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 NPHS2Q9NP85 383 aa6.29□□□□□ -1.4
CMSS1-207ENST00000494412 FAM8A1Q9UBU6 413 aa6.29□□□□□ -1.4
CMSS1-207ENST00000494412 HCN2Q9UL51 889 aa6.29□□□□□ -1.4
CMSS1-207ENST00000494412 USP31Q70CQ4 1352 aa6.29□□□□□ -1.4
CMSS1-207ENST00000494412 BNIP3LO60238 219 aa6.28□□□□□ -1.4
CMSS1-207ENST00000494412 GADD45BO75293 160 aaPredicted RBP6.28□□□□□ -1.4
CMSS1-207ENST00000494412 INPP5BP32019 993 aa6.28□□□□□ -1.4
CMSS1-207ENST00000494412 BTLAQ7Z6A9 289 aa6.28□□□□□ -1.4
CMSS1-207ENST00000494412 VPS37DQ86XT2 251 aa6.28□□□□□ -1.4
CMSS1-207ENST00000494412 ABHD17AQ96GS6 310 aa6.28□□□□□ -1.4
CMSS1-207ENST00000494412 GMLQ99445 158 aa6.28□□□□□ -1.4
CMSS1-207ENST00000494412 SRA1Q9HD15 236 aaKnown RBP6.28□□□□□ -1.4
CMSS1-207ENST00000494412 TMEM63CQ9P1W3 806 aa6.28□□□□□ -1.4
CMSS1-207ENST00000494412 GPC6Q9Y625 555 aaPredicted RBP6.28□□□□□ -1.4
CMSS1-207ENST00000494412 KCNMB2Q9Y691 235 aa6.28□□□□□ -1.4
CMSS1-207ENST00000494412 DCDC2BA2VCK2 349 aa6.27□□□□□ -1.41
CMSS1-207ENST00000494412 WIPF1O43516 503 aa6.27□□□□□ -1.41
CMSS1-207ENST00000494412 FOXR1Q6PIV2 292 aa6.27□□□□□ -1.41
CMSS1-207ENST00000494412 NXPE4Q6UWF7 544 aa6.27□□□□□ -1.41
CMSS1-207ENST00000494412 ARMC5Q96C12 935 aa6.27□□□□□ -1.41
CMSS1-207ENST00000494412 TRERF1Q96PN7 1200 aa6.27□□□□□ -1.41
CMSS1-207ENST00000494412 BCO2Q9BYV7 579 aa6.27□□□□□ -1.41
CMSS1-207ENST00000494412 NDFIP2Q9NV92 336 aa6.27□□□□□ -1.41
CMSS1-207ENST00000494412 GJA3Q9Y6H8 435 aa6.27□□□□□ -1.41
CMSS1-207ENST00000494412 EREGO14944 169 aa6.26□□□□□ -1.41
CMSS1-207ENST00000494412 ATXN7O15265 892 aaPredicted RBP6.26□□□□□ -1.41
CMSS1-207ENST00000494412 EPB42P16452 691 aa6.26□□□□□ -1.41
CMSS1-207ENST00000494412 LBRQ14739 615 aaKnown RBP6.26□□□□□ -1.41
CMSS1-207ENST00000494412 CCDC144BQ3MJ40 725 aa6.26□□□□□ -1.41
CMSS1-207ENST00000494412 NLRP8Q86W28 1048 aa6.26□□□□□ -1.41
CMSS1-207ENST00000494412 PCDHGC4Q9Y5F7 938 aa6.26□□□□□ -1.41
CMSS1-207ENST00000494412 CADPSQ9ULU8 1353 aa6.26□□□□□ -1.41
CMSS1-207ENST00000494412 KHNYNO15037 678 aaKnown RBP6.25□□□□□ -1.41
CMSS1-207ENST00000494412 PPM1GO15355 546 aaPredicted RBP6.25□□□□□ -1.41
CMSS1-207ENST00000494412 STK10O94804 968 aaKnown RBP6.25□□□□□ -1.41
CMSS1-207ENST00000494412 LORP23490 312 aaPredicted RBP6.25□□□□□ -1.41
CMSS1-207ENST00000494412 ST13P50502 369 aaKnown RBP6.25□□□□□ -1.41
CMSS1-207ENST00000494412 CTBSQ01459 385 aa6.25□□□□□ -1.41
CMSS1-207ENST00000494412 PAK2Q13177 524 aa6.25□□□□□ -1.41
CMSS1-207ENST00000494412 NOP9Q86U38 636 aaKnown RBP6.25□□□□□ -1.41
CMSS1-207ENST00000494412 CEP63Q96MT8 703 aa6.25□□□□□ -1.41
CMSS1-207ENST00000494412 SRCIN1Q9C0H9 1055 aa6.25□□□□□ -1.41
CMSS1-207ENST00000494412 COPRSQ9NQ92 184 aa6.25□□□□□ -1.41
CMSS1-207ENST00000494412 TTF2Q9UNY4 1162 aaKnown RBP6.25□□□□□ -1.41
CMSS1-207ENST00000494412 C2CD2LO14523 706 aa6.24□□□□□ -1.41
CMSS1-207ENST00000494412 XYLBO75191 536 aa6.24□□□□□ -1.41
CMSS1-207ENST00000494412 MAPTP10636 758 aaKnown RBP6.24□□□□□ -1.41
CMSS1-207ENST00000494412 CD33P20138 364 aa6.24□□□□□ -1.41
CMSS1-207ENST00000494412 TNP2Q05952 138 aa6.24□□□□□ -1.41
CMSS1-207ENST00000494412 TYRO3Q06418 890 aa6.24□□□□□ -1.41
CMSS1-207ENST00000494412 GRIN2CQ14957 1233 aa6.24□□□□□ -1.41
CMSS1-207ENST00000494412 FIGNL1Q6PIW4 674 aa6.24□□□□□ -1.41
CMSS1-207ENST00000494412 MCF2L2Q86YR7 1114 aa6.24□□□□□ -1.41
CMSS1-207ENST00000494412 GALNT12Q8IXK2 581 aa6.24□□□□□ -1.41
CMSS1-207ENST00000494412 C1orf127Q8N9H9 656 aa6.24□□□□□ -1.41
CMSS1-207ENST00000494412 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.24□□□□□ -1.41
CMSS1-207ENST00000494412 CHRDQ9H2X0 955 aa6.24□□□□□ -1.41
CMSS1-207ENST00000494412 SUV39H2Q9H5I1 410 aa6.24□□□□□ -1.41
CMSS1-207ENST00000494412 STRN4Q9NRL3 753 aa6.24□□□□□ -1.41
CMSS1-207ENST00000494412 MBIPQ9NS73 344 aa6.24□□□□□ -1.41
CMSS1-207ENST00000494412 CNTN3Q9P232 1028 aa6.24□□□□□ -1.41
CMSS1-207ENST00000494412 ATXN7L1Q9ULK2 861 aaPredicted RBP6.24□□□□□ -1.41
CMSS1-207ENST00000494412 IGF1RP08069 1367 aa6.23□□□□□ -1.41
CMSS1-207ENST00000494412 ADAMTS2O95450 1211 aa6.23□□□□□ -1.41
CMSS1-207ENST00000494412 MX2P20592 715 aa6.23□□□□□ -1.41
CMSS1-207ENST00000494412 FGFR3P22607 806 aa6.23□□□□□ -1.41
CMSS1-207ENST00000494412 GRNP28799 593 aaKnown RBP6.23□□□□□ -1.41
CMSS1-207ENST00000494412 GJA8P48165 433 aa6.23□□□□□ -1.41
CMSS1-207ENST00000494412 GRM2Q14416 872 aa6.23□□□□□ -1.41
CMSS1-207ENST00000494412 WHAMMQ8TF30 809 aa6.23□□□□□ -1.41
CMSS1-207ENST00000494412 GPRASP2Q96D09 838 aa6.23□□□□□ -1.41
CMSS1-207ENST00000494412 HIRIP3Q9BW71 556 aaPredicted RBP6.23□□□□□ -1.41
CMSS1-207ENST00000494412 ZSWIM4Q9H7M6 989 aa6.23□□□□□ -1.41
CMSS1-207ENST00000494412 ABI2Q9NYB9 513 aaPredicted RBP6.23□□□□□ -1.41
CMSS1-207ENST00000494412 PHF24Q9UPV7 400 aa6.23□□□□□ -1.41
CMSS1-207ENST00000494412 TMA7Q9Y2S6 64 aaKnown RBP6.23□□□□□ -1.41
CMSS1-207ENST00000494412 FGRP09769 529 aa6.22□□□□□ -1.41
CMSS1-207ENST00000494412 FAM157BP0CG42 384 aa6.22□□□□□ -1.41
CMSS1-207ENST00000494412 ATF4P18848 351 aaPredicted RBP6.22□□□□□ -1.41
CMSS1-207ENST00000494412 NCLP19338 710 aaKnown RBP6.22□□□□□ -1.41
CMSS1-207ENST00000494412 CES1P23141 567 aa6.22□□□□□ -1.41
CMSS1-207ENST00000494412 GSTT1P30711 240 aa6.22□□□□□ -1.41
CMSS1-207ENST00000494412 RBL2Q08999 1139 aa6.22□□□□□ -1.41
CMSS1-207ENST00000494412 SFSWAPQ12872 951 aaKnown RBP6.22□□□□□ -1.41
CMSS1-207ENST00000494412 SOGA3Q5TF21 947 aa6.22□□□□□ -1.41
CMSS1-207ENST00000494412 SAMD5Q5TGI4 173 aa6.22□□□□□ -1.41
CMSS1-207ENST00000494412 TTC39BQ5VTQ0 682 aaPredicted RBP6.22□□□□□ -1.41
CMSS1-207ENST00000494412 ERMP1Q7Z2K6 904 aa6.22□□□□□ -1.41
CMSS1-207ENST00000494412 NLRP13Q86W25 1043 aa6.22□□□□□ -1.41
CMSS1-207ENST00000494412 KBTBD4Q9NVX7 518 aa6.22□□□□□ -1.41
CMSS1-207ENST00000494412 ANKRD62A6NC57 917 aa6.21□□□□□ -1.42
CMSS1-207ENST00000494412 F6X3S4 739 aa6.21□□□□□ -1.42
CMSS1-207ENST00000494412 EFSO43281 561 aa6.21□□□□□ -1.42
CMSS1-207ENST00000494412 SRSF11Q05519 484 aaKnown RBP6.21□□□□□ -1.42
CMSS1-207ENST00000494412 ZSCAN1Q8NBB4 408 aa6.21□□□□□ -1.42
CMSS1-207ENST00000494412 PMEPA1Q969W9 287 aa6.21□□□□□ -1.42
CMSS1-207ENST00000494412 EHD4Q9H223 541 aa6.21□□□□□ -1.42
CMSS1-207ENST00000494412 PIF1Q9H611 641 aa6.21□□□□□ -1.42
CMSS1-207ENST00000494412 BRD7Q9NPI1 651 aa6.21□□□□□ -1.42
CMSS1-207ENST00000494412 PPP4R2Q9NY27 417 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms