RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 SIK1P57059 783 aa10.05□□□□□ -0.8
SSB-212ENST00000494051 ELMSAN1Q6PJG2 1045 aa10.05□□□□□ -0.8
SSB-212ENST00000494051 XKR5Q6UX68 686 aa10.05□□□□□ -0.8
SSB-212ENST00000494051 LINC00114Q6XXX2 140 aa10.05□□□□□ -0.8
SSB-212ENST00000494051 GJD3Q8N144 294 aa10.05□□□□□ -0.8
SSB-212ENST00000494051 TMC1Q8TDI8 760 aa10.05□□□□□ -0.8
SSB-212ENST00000494051 JPH1Q9HDC5 661 aaPredicted RBP10.05□□□□□ -0.8
SSB-212ENST00000494051 CNTN3Q9P232 1028 aa10.05□□□□□ -0.8
SSB-212ENST00000494051 RNF225M0QZC1 329 aaPredicted RBP10.04□□□□□ -0.8
SSB-212ENST00000494051 LILRB5O75023 590 aa10.04□□□□□ -0.8
SSB-212ENST00000494051 RGS9O75916 674 aaPredicted RBP10.04□□□□□ -0.8
SSB-212ENST00000494051 PERM1Q5SV97 790 aa10.04□□□□□ -0.8
SSB-212ENST00000494051 C20orf204Q6ZNR8 217 aa10.04□□□□□ -0.8
SSB-212ENST00000494051 C1orf127Q8N9H9 656 aa10.04□□□□□ -0.8
SSB-212ENST00000494051 GNB5O14775 395 aa10.03□□□□□ -0.8
SSB-212ENST00000494051 GHRHP01286 108 aa10.03□□□□□ -0.8
SSB-212ENST00000494051 HYAL2Q12891 473 aa10.03□□□□□ -0.8
SSB-212ENST00000494051 COL13A1Q5TAT6 717 aaPredicted RBP10.03□□□□□ -0.8
SSB-212ENST00000494051 TNFRSF21O75509 655 aa10.02□□□□□ -0.81
SSB-212ENST00000494051 HOXD8P13378 290 aaPredicted RBP10.02□□□□□ -0.81
SSB-212ENST00000494051 CES1P23141 567 aa10.02□□□□□ -0.81
SSB-212ENST00000494051 SPACA7Q96KW9 195 aa10.02□□□□□ -0.81
SSB-212ENST00000494051 SMG9Q9H0W8 520 aaKnown RBP10.02□□□□□ -0.81
SSB-212ENST00000494051 RBSNQ9H1K0 784 aa10.02□□□□□ -0.81
SSB-212ENST00000494051 KANSL3Q9P2N6 904 aa10.02□□□□□ -0.81
SSB-212ENST00000494051 PIK3R2O00459 728 aa10.01□□□□□ -0.81
SSB-212ENST00000494051 PHACTR2O75167 634 aa10.01□□□□□ -0.81
SSB-212ENST00000494051 NCAPG2Q86XI2 1143 aa10.01□□□□□ -0.81
SSB-212ENST00000494051 LPIN3Q9BQK8 851 aa10.01□□□□□ -0.81
SSB-212ENST00000494051 KRTAP9-2Q9BYQ4 174 aa10.01□□□□□ -0.81
SSB-212ENST00000494051 FOXD3Q9UJU5 478 aaPredicted RBP10.01□□□□□ -0.81
SSB-212ENST00000494051 PDE3BQ13370 1112 aa10□□□□□ -0.81
SSB-212ENST00000494051 SNX29Q8TEQ0 813 aa10□□□□□ -0.81
SSB-212ENST00000494051 PLD4Q96BZ4 506 aa10□□□□□ -0.81
SSB-212ENST00000494051 CITED4Q96RK1 184 aa10□□□□□ -0.81
SSB-212ENST00000494051 SUV39H2Q9H5I1 410 aa10□□□□□ -0.81
SSB-212ENST00000494051 PRDM6Q9NQX0 595 aa10□□□□□ -0.81
SSB-212ENST00000494051 FRRS1LQ9P0K9 344 aa10□□□□□ -0.81
SSB-212ENST00000494051 AFF1P51825 1210 aaKnown RBP9.99□□□□□ -0.81
SSB-212ENST00000494051 HOMEZQ8IX15 550 aa9.99□□□□□ -0.81
SSB-212ENST00000494051 TRIM11Q96F44 468 aa9.99□□□□□ -0.81
SSB-212ENST00000494051 PLVAPQ9BX97 442 aa9.99□□□□□ -0.81
SSB-212ENST00000494051 CHRDQ9H2X0 955 aa9.99□□□□□ -0.81
SSB-212ENST00000494051 DCTN4Q9UJW0 460 aa9.99□□□□□ -0.81
SSB-212ENST00000494051 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.99□□□□□ -0.81
SSB-212ENST00000494051 MAPK1P28482 360 aa9.98□□□□□ -0.81
SSB-212ENST00000494051 PMEPA1Q969W9 287 aa9.98□□□□□ -0.81
SSB-212ENST00000494051 KRTAP9-6A0A140TA67 174 aa9.97□□□□□ -0.81
SSB-212ENST00000494051 EREGO14944 169 aa9.97□□□□□ -0.81
SSB-212ENST00000494051 KIF4AO95239 1232 aa9.97□□□□□ -0.81
SSB-212ENST00000494051 RASSF7Q02833 373 aa9.97□□□□□ -0.81
SSB-212ENST00000494051 COL9A3Q14050 684 aaPredicted RBP9.97□□□□□ -0.81
SSB-212ENST00000494051 FAM129BQ96TA1 746 aa9.97□□□□□ -0.81
SSB-212ENST00000494051 RBCK1Q9BYM8 510 aa9.97□□□□□ -0.81
SSB-212ENST00000494051 NOP53Q9NZM5 478 aaKnown RBP9.97□□□□□ -0.81
SSB-212ENST00000494051 NID1P14543 1247 aa9.96□□□□□ -0.82
SSB-212ENST00000494051 ATP11AP98196 1134 aa9.96□□□□□ -0.82
SSB-212ENST00000494051 TRAPPC3LQ5T215 181 aa9.96□□□□□ -0.82
SSB-212ENST00000494051 SALL4Q9UJQ4 1053 aa9.96□□□□□ -0.82
SSB-212ENST00000494051 GDF6Q6KF10 455 aaPredicted RBP9.95□□□□□ -0.82
SSB-212ENST00000494051 CEP120Q8N960 986 aa9.95□□□□□ -0.82
SSB-212ENST00000494051 TTC9Q92623 222 aa9.95□□□□□ -0.82
SSB-212ENST00000494051 NIF3L1Q9GZT8 377 aa9.95□□□□□ -0.82
SSB-212ENST00000494051 RASSF4Q9H2L5 321 aa9.95□□□□□ -0.82
SSB-212ENST00000494051 ZFYVE28Q9HCC9 887 aa9.95□□□□□ -0.82
SSB-212ENST00000494051 SPDYE3A6NKU9 549 aa9.94□□□□□ -0.82
SSB-212ENST00000494051 NEFLP07196 543 aa9.94□□□□□ -0.82
SSB-212ENST00000494051 COL8A1P27658 744 aa9.94□□□□□ -0.82
SSB-212ENST00000494051 GRIK5Q16478 980 aa9.94□□□□□ -0.82
SSB-212ENST00000494051 CEP135Q66GS9 1140 aa9.94□□□□□ -0.82
SSB-212ENST00000494051 TMC7Q7Z402 723 aa9.94□□□□□ -0.82
SSB-212ENST00000494051 TMEM151AQ8N4L1 468 aa9.94□□□□□ -0.82
SSB-212ENST00000494051 DMRTB1Q96MA1 342 aa9.94□□□□□ -0.82
SSB-212ENST00000494051 AMOTL2Q9Y2J4 779 aa9.94□□□□□ -0.82
SSB-212ENST00000494051 GPR182O15218 404 aa9.93□□□□□ -0.82
SSB-212ENST00000494051 SMNDC1O75940 238 aaKnown RBP eCLIP9.93□□□□□ -0.82
SSB-212ENST00000494051 GDF11O95390 407 aa9.93□□□□□ -0.82
SSB-212ENST00000494051 POLR3DP05423 398 aaPredicted RBP9.93□□□□□ -0.82
SSB-212ENST00000494051 ACPPP15309 386 aa9.93□□□□□ -0.82
SSB-212ENST00000494051 ORC1Q13415 861 aa9.93□□□□□ -0.82
SSB-212ENST00000494051 DMRTC2Q8IXT2 367 aaPredicted RBP9.93□□□□□ -0.82
SSB-212ENST00000494051 PBX4Q9BYU1 374 aa9.93□□□□□ -0.82
SSB-212ENST00000494051 TRIM33Q9UPN9 1127 aa9.93□□□□□ -0.82
SSB-212ENST00000494051 IGHA2P01877 340 aa9.92□□□□□ -0.82
SSB-212ENST00000494051 EDN3P14138 238 aa9.92□□□□□ -0.82
SSB-212ENST00000494051 MSL1Q68DK7 614 aa9.92□□□□□ -0.82
SSB-212ENST00000494051 WFDC8Q8IUA0 241 aa9.92□□□□□ -0.82
SSB-212ENST00000494051 FAM229AH3BQW9 127 aa9.91□□□□□ -0.82
SSB-212ENST00000494051 TRPA1O75762 1119 aa9.91□□□□□ -0.82
SSB-212ENST00000494051 PRRT3Q5FWE3 981 aa9.91□□□□□ -0.82
SSB-212ENST00000494051 USPL1Q5W0Q7 1092 aa9.91□□□□□ -0.82
SSB-212ENST00000494051 SND1Q7KZF4 910 aaKnown RBP eCLIP9.91□□□□□ -0.82
SSB-212ENST00000494051 IL22RA1Q8N6P7 574 aa9.91□□□□□ -0.82
SSB-212ENST00000494051 LACRTQ9GZZ8 138 aa9.91□□□□□ -0.82
SSB-212ENST00000494051 TRIM28Q13263 835 aaKnown RBP9.9□□□□□ -0.82
SSB-212ENST00000494051 KRTAP1-3Q8IUG1 177 aa9.9□□□□□ -0.82
SSB-212ENST00000494051 ZSCAN29Q8IWY8 852 aaPredicted RBP9.9□□□□□ -0.82
SSB-212ENST00000494051 DCAF5Q96JK2 942 aa9.9□□□□□ -0.82
SSB-212ENST00000494051 PSMG3-AS1Q96PY0 264 aa9.9□□□□□ -0.82
SSB-212ENST00000494051 OSMRQ99650 979 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms