RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 MROH5Q6ZUA9 1318 aa14.04□□□□□ -0.16
MCF2L-231ENST00000494043 SALL3Q9BXA9 1300 aa14.04□□□□□ -0.16
MCF2L-231ENST00000494043 ZNF609O15014 1411 aa14.04□□□□□ -0.16
MCF2L-231ENST00000494043 NPR1P16066 1061 aa14.03□□□□□ -0.16
MCF2L-231ENST00000494043 TNNI3KQ59H18 835 aa14.03□□□□□ -0.16
MCF2L-231ENST00000494043 AACSQ86V21 672 aa14.03□□□□□ -0.16
MCF2L-231ENST00000494043 CRAMP1Q96RY5 1269 aa14.03□□□□□ -0.16
MCF2L-231ENST00000494043 FPGT-TNNI3KV9GXZ4 949 aa14.03□□□□□ -0.16
MCF2L-231ENST00000494043 TAF1P21675 1872 aa14.02□□□□□ -0.16
MCF2L-231ENST00000494043 C2CD5Q86YS7 1000 aa14.02□□□□□ -0.17
MCF2L-231ENST00000494043 PLEKHM2Q8IWE5 1019 aa14.02□□□□□ -0.17
MCF2L-231ENST00000494043 VGLL2Q8N8G2 317 aa14.02□□□□□ -0.17
MCF2L-231ENST00000494043 EAF2Q96CJ1 260 aaPredicted RBP14.02□□□□□ -0.17
MCF2L-231ENST00000494043 SGIP1Q9BQI5 828 aa14.02□□□□□ -0.17
MCF2L-231ENST00000494043 H0YIN7 160 aa14.01□□□□□ -0.17
MCF2L-231ENST00000494043 IFIT2P09913 472 aaKnown RBP14.01□□□□□ -0.17
MCF2L-231ENST00000494043 MX1P20591 662 aa14.01□□□□□ -0.17
MCF2L-231ENST00000494043 CHRNDQ07001 517 aa14.01□□□□□ -0.17
MCF2L-231ENST00000494043 MASTLQ96GX5 879 aa14.01□□□□□ -0.17
MCF2L-231ENST00000494043 MINPP1Q9UNW1 487 aa14.01□□□□□ -0.17
MCF2L-231ENST00000494043 AKAP2Q9Y2D5 859 aa14.01□□□□□ -0.17
MCF2L-231ENST00000494043 KIF13BQ9NQT8 1826 aa14.01□□□□□ -0.17
MCF2L-231ENST00000494043 BBOX1O75936 387 aa14□□□□□ -0.17
MCF2L-231ENST00000494043 PDE8BO95263 885 aa14□□□□□ -0.17
MCF2L-231ENST00000494043 PDE1AP54750 535 aa14□□□□□ -0.17
MCF2L-231ENST00000494043 ATP2B3Q16720 1220 aa14□□□□□ -0.17
MCF2L-231ENST00000494043 STYK1Q6J9G0 422 aa14□□□□□ -0.17
MCF2L-231ENST00000494043 CCDC8Q9H0W5 538 aaPredicted RBP14□□□□□ -0.17
MCF2L-231ENST00000494043 TLR7Q9NYK1 1049 aaKnown RBP14□□□□□ -0.17
MCF2L-231ENST00000494043 STAP2Q9UGK3 403 aa14□□□□□ -0.17
MCF2L-231ENST00000494043 A0A1B0GUL6 1792 aa14□□□□□ -0.17
MCF2L-231ENST00000494043 LRRC37AA6NMS7 1700 aa13.99□□□□□ -0.17
MCF2L-231ENST00000494043 AOX1Q06278 1338 aa13.99□□□□□ -0.17
MCF2L-231ENST00000494043 A0A1B0GUL7 405 aa13.99□□□□□ -0.17
MCF2L-231ENST00000494043 CHRNA5P30532 468 aa13.99□□□□□ -0.17
MCF2L-231ENST00000494043 ALDH1B1P30837 517 aa13.99□□□□□ -0.17
MCF2L-231ENST00000494043 PTGER2P43116 358 aa13.99□□□□□ -0.17
MCF2L-231ENST00000494043 PUM3Q15397 648 aaKnown RBP13.99□□□□□ -0.17
MCF2L-231ENST00000494043 TMC4Q7Z404 712 aa13.99□□□□□ -0.17
MCF2L-231ENST00000494043 HELBQ8NG08 1087 aaPredicted RBP13.99□□□□□ -0.17
MCF2L-231ENST00000494043 GPATCH3Q96I76 525 aa13.99□□□□□ -0.17
MCF2L-231ENST00000494043 ANKRD2Q9GZV1 360 aa13.99□□□□□ -0.17
MCF2L-231ENST00000494043 OSBPL3Q9H4L5 887 aa13.99□□□□□ -0.17
MCF2L-231ENST00000494043 DBNLQ9UJU6 430 aaKnown RBP13.99□□□□□ -0.17
MCF2L-231ENST00000494043 DLEC1Q9Y238 1755 aa13.99□□□□□ -0.17
MCF2L-231ENST00000494043 TTC41PQ6P2S7 1318 aa13.98□□□□□ -0.17
MCF2L-231ENST00000494043 PPEF1O14829 653 aaPredicted RBP13.98□□□□□ -0.17
MCF2L-231ENST00000494043 TAF5LO75529 589 aa13.98□□□□□ -0.17
MCF2L-231ENST00000494043 FGFR2P21802 821 aa13.98□□□□□ -0.17
MCF2L-231ENST00000494043 ZNF622Q969S3 477 aaKnown RBP eCLIP13.98□□□□□ -0.17
MCF2L-231ENST00000494043 NEUROD6Q96NK8 337 aa13.98□□□□□ -0.17
MCF2L-231ENST00000494043 DBNDD2Q9BQY9 259 aa13.98□□□□□ -0.17
MCF2L-231ENST00000494043 ECHDC1Q9NTX5 307 aa13.98□□□□□ -0.17
MCF2L-231ENST00000494043 ARAP2Q8WZ64 1704 aa13.98□□□□□ -0.17
MCF2L-231ENST00000494043 TIMM10P62072 90 aa13.97□□□□□ -0.17
MCF2L-231ENST00000494043 TTC22Q5TAA0 569 aa13.97□□□□□ -0.17
MCF2L-231ENST00000494043 TSHZ3Q63HK5 1081 aa13.97□□□□□ -0.17
MCF2L-231ENST00000494043 PELP1Q8IZL8 1130 aaKnown RBP13.97□□□□□ -0.17
MCF2L-231ENST00000494043 LPIN2Q92539 896 aa13.97□□□□□ -0.17
MCF2L-231ENST00000494043 CNKSR1Q969H4 720 aa13.97□□□□□ -0.17
MCF2L-231ENST00000494043 SPON1Q9HCB6 807 aa13.97□□□□□ -0.17
MCF2L-231ENST00000494043 KIAA1551Q9HCM1 1747 aa13.97□□□□□ -0.17
MCF2L-231ENST00000494043 SLC5A1P13866 664 aa13.96□□□□□ -0.17
MCF2L-231ENST00000494043 ADORA1P30542 326 aa13.96□□□□□ -0.17
MCF2L-231ENST00000494043 UBE4AQ14139 1066 aa13.96□□□□□ -0.17
MCF2L-231ENST00000494043 BMP2KLQ5H9B9 411 aa13.96□□□□□ -0.17
MCF2L-231ENST00000494043 SLC51AQ86UW1 340 aa13.96□□□□□ -0.17
MCF2L-231ENST00000494043 PI4K2BQ8TCG2 481 aa13.96□□□□□ -0.17
MCF2L-231ENST00000494043 XAGE2Q96GT9 111 aa13.96□□□□□ -0.17
MCF2L-231ENST00000494043 ATP6V0A2Q9Y487 856 aa13.96□□□□□ -0.17
MCF2L-231ENST00000494043 XDHP47989 1333 aa13.95□□□□□ -0.18
MCF2L-231ENST00000494043 SNAP23O00161 211 aa13.95□□□□□ -0.18
MCF2L-231ENST00000494043 ERC2O15083 957 aa13.95□□□□□ -0.18
MCF2L-231ENST00000494043 GLRX3O76003 335 aaKnown RBP13.95□□□□□ -0.18
MCF2L-231ENST00000494043 IFIT1P09914 478 aaKnown RBP13.95□□□□□ -0.18
MCF2L-231ENST00000494043 GSPT1P15170 499 aaKnown RBP13.95□□□□□ -0.18
MCF2L-231ENST00000494043 DPEP1P16444 411 aa13.95□□□□□ -0.18
MCF2L-231ENST00000494043 TGFB2P61812 414 aa13.95□□□□□ -0.18
MCF2L-231ENST00000494043 PRPF40BQ6NWY9 871 aaKnown RBP13.95□□□□□ -0.18
MCF2L-231ENST00000494043 SP8Q8IXZ3 490 aa13.95□□□□□ -0.18
MCF2L-231ENST00000494043 CD2APQ9Y5K6 639 aa13.95□□□□□ -0.18
MCF2L-231ENST00000494043 A0A0G2JLW4 131 aa13.94□□□□□ -0.18
MCF2L-231ENST00000494043 KCNA3P22001 575 aa13.94□□□□□ -0.18
MCF2L-231ENST00000494043 KCNJ4P48050 445 aa13.94□□□□□ -0.18
MCF2L-231ENST00000494043 GPSM2P81274 684 aa13.94□□□□□ -0.18
MCF2L-231ENST00000494043 LTBP1Q14766 1721 aa13.94□□□□□ -0.18
MCF2L-231ENST00000494043 GORABQ5T7V8 394 aa13.94□□□□□ -0.18
MCF2L-231ENST00000494043 PODXL2Q9NZ53 605 aa13.94□□□□□ -0.18
MCF2L-231ENST00000494043 ANKIB1Q9P2G1 1089 aa13.94□□□□□ -0.18
MCF2L-231ENST00000494043 ZNF804BA4D1E1 1349 aa13.93□□□□□ -0.18
MCF2L-231ENST00000494043 ATP5JP18859 108 aa13.93□□□□□ -0.18
MCF2L-231ENST00000494043 LEMD3Q9Y2U8 911 aa13.93□□□□□ -0.18
MCF2L-231ENST00000494043 CACNA1SQ13698 1873 aa13.93□□□□□ -0.18
MCF2L-231ENST00000494043 SLX4Q8IY92 1834 aa13.92□□□□□ -0.18
MCF2L-231ENST00000494043 ATP2B4P23634 1241 aa13.92□□□□□ -0.18
MCF2L-231ENST00000494043 CCDC158Q5M9N0 1113 aa13.92□□□□□ -0.18
MCF2L-231ENST00000494043 TTC39AQ5SRH9 613 aa13.92□□□□□ -0.18
MCF2L-231ENST00000494043 KLHL34Q8N239 644 aa13.92□□□□□ -0.18
MCF2L-231ENST00000494043 TTLL6Q8N841 843 aa13.92□□□□□ -0.18
MCF2L-231ENST00000494043 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms