RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 KHNYNO15037 678 aaKnown RBP9.51□□□□□ -0.89
SMC2-205ENST00000493955 MMP20O60882 483 aa9.51□□□□□ -0.89
SMC2-205ENST00000493955 THBS1P07996 1170 aa9.51□□□□□ -0.89
SMC2-205ENST00000493955 RARAP10276 462 aa9.51□□□□□ -0.89
SMC2-205ENST00000493955 TARSP26639 723 aaKnown RBP9.51□□□□□ -0.89
SMC2-205ENST00000493955 LAMC2Q13753 1193 aa9.51□□□□□ -0.89
SMC2-205ENST00000493955 NUCKS1Q9H1E3 243 aaKnown RBP9.51□□□□□ -0.89
SMC2-205ENST00000493955 EHD4Q9H223 541 aa9.51□□□□□ -0.89
SMC2-205ENST00000493955 PPP4R2Q9NY27 417 aa9.51□□□□□ -0.89
SMC2-205ENST00000493955 INPP5FQ9Y2H2 1132 aa9.51□□□□□ -0.89
SMC2-205ENST00000493955 A0A1W2PP55 124 aa9.5□□□□□ -0.89
SMC2-205ENST00000493955 SRA1Q9HD15 236 aaKnown RBP9.5□□□□□ -0.89
SMC2-205ENST00000493955 ATP13A2Q9NQ11 1180 aa9.5□□□□□ -0.89
SMC2-205ENST00000493955 LATS2Q9NRM7 1088 aa9.5□□□□□ -0.89
SMC2-205ENST00000493955 PRKAG2Q9UGJ0 569 aa9.5□□□□□ -0.89
SMC2-205ENST00000493955 LOC100996750A0A140TA64 210 aa9.49□□□□□ -0.89
SMC2-205ENST00000493955 H7C1W4 665 aa9.49□□□□□ -0.89
SMC2-205ENST00000493955 TNP2Q05952 138 aa9.49□□□□□ -0.89
SMC2-205ENST00000493955 UBAP2LQ14157 1087 aaKnown RBP9.49□□□□□ -0.89
SMC2-205ENST00000493955 PEAR1Q5VY43 1037 aaPredicted RBP9.49□□□□□ -0.89
SMC2-205ENST00000493955 GLIS3Q8NEA6 775 aa9.49□□□□□ -0.89
SMC2-205ENST00000493955 PNMA5Q96PV4 448 aa9.49□□□□□ -0.89
SMC2-205ENST00000493955 KRTAP4-6Q9BYQ5 205 aa9.49□□□□□ -0.89
SMC2-205ENST00000493955 MAPTP10636 758 aaKnown RBP9.48□□□□□ -0.89
SMC2-205ENST00000493955 PTSQ03393 145 aa9.48□□□□□ -0.89
SMC2-205ENST00000493955 PRPF40BQ6NWY9 871 aaKnown RBP9.48□□□□□ -0.89
SMC2-205ENST00000493955 ERMP1Q7Z2K6 904 aa9.48□□□□□ -0.89
SMC2-205ENST00000493955 EFCC1Q9HA90 598 aa9.48□□□□□ -0.89
SMC2-205ENST00000493955 ZFATQ9P243 1243 aa9.48□□□□□ -0.89
SMC2-205ENST00000493955 SALL4Q9UJQ4 1053 aa9.48□□□□□ -0.89
SMC2-205ENST00000493955 TTF2Q9UNY4 1162 aaKnown RBP9.48□□□□□ -0.89
SMC2-205ENST00000493955 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.48□□□□□ -0.89
SMC2-205ENST00000493955 SLC35F4A4IF30 521 aa9.48□□□□□ -0.89
SMC2-205ENST00000493955 NFKB1P19838 968 aa9.48□□□□□ -0.89
SMC2-205ENST00000493955 SOX18P35713 384 aa9.48□□□□□ -0.89
SMC2-205ENST00000493955 C3orf58Q8NDZ4 430 aa9.48□□□□□ -0.89
SMC2-205ENST00000493955 GMLQ99445 158 aa9.48□□□□□ -0.89
SMC2-205ENST00000493955 NOC4LQ9BVI4 516 aaKnown RBP9.48□□□□□ -0.89
SMC2-205ENST00000493955 STRN4Q9NRL3 753 aa9.48□□□□□ -0.89
SMC2-205ENST00000493955 MARK1Q9P0L2 795 aa9.48□□□□□ -0.89
SMC2-205ENST00000493955 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.48□□□□□ -0.89
SMC2-205ENST00000493955 SOBPA7XYQ1 873 aa9.47□□□□□ -0.89
SMC2-205ENST00000493955 PSAPP07602 524 aa9.47□□□□□ -0.89
SMC2-205ENST00000493955 DNAJA1P31689 397 aaKnown RBP9.47□□□□□ -0.89
SMC2-205ENST00000493955 SPEM2Q0P670 501 aa9.47□□□□□ -0.89
SMC2-205ENST00000493955 BNIP3LO60238 219 aa9.46□□□□□ -0.9
SMC2-205ENST00000493955 KIF4AO95239 1232 aa9.46□□□□□ -0.9
SMC2-205ENST00000493955 MAP3K6O95382 1288 aa9.46□□□□□ -0.9
SMC2-205ENST00000493955 ATP2B1P20020 1258 aa9.46□□□□□ -0.9
SMC2-205ENST00000493955 FCGRTP55899 365 aa9.46□□□□□ -0.9
SMC2-205ENST00000493955 TRIM47Q96LD4 638 aa9.46□□□□□ -0.9
SMC2-205ENST00000493955 LIN7BQ9HAP6 207 aa9.46□□□□□ -0.9
SMC2-205ENST00000493955 ABCB6Q9NP58 842 aa9.46□□□□□ -0.9
SMC2-205ENST00000493955 NDFIP2Q9NV92 336 aa9.46□□□□□ -0.9
SMC2-205ENST00000493955 TLR7Q9NYK1 1049 aaKnown RBP9.46□□□□□ -0.9
SMC2-205ENST00000493955 PPM1HQ9ULR3 514 aa9.46□□□□□ -0.9
SMC2-205ENST00000493955 XRCC5P13010 732 aaKnown RBP9.45□□□□□ -0.9
SMC2-205ENST00000493955 HOXD8P13378 290 aaPredicted RBP9.45□□□□□ -0.9
SMC2-205ENST00000493955 ARID5AQ03989 594 aa9.45□□□□□ -0.9
SMC2-205ENST00000493955 HYAL2Q12891 473 aa9.45□□□□□ -0.9
SMC2-205ENST00000493955 NCAPG2Q86XI2 1143 aa9.45□□□□□ -0.9
SMC2-205ENST00000493955 TRIM22Q8IYM9 498 aa9.45□□□□□ -0.9
SMC2-205ENST00000493955 OXCT2Q9BYC2 517 aaPredicted RBP9.45□□□□□ -0.9
SMC2-205ENST00000493955 SENP2Q9HC62 589 aa9.45□□□□□ -0.9
SMC2-205ENST00000493955 PLAURQ03405 335 aa9.44□□□□□ -0.9
SMC2-205ENST00000493955 GRIN2CQ14957 1233 aa9.44□□□□□ -0.9
SMC2-205ENST00000493955 DBN1Q16643 649 aa9.44□□□□□ -0.9
SMC2-205ENST00000493955 ANKRD24Q8TF21 1146 aa9.44□□□□□ -0.9
SMC2-205ENST00000493955 ARMC5Q96C12 935 aa9.44□□□□□ -0.9
SMC2-205ENST00000493955 ABHD17AQ96GS6 310 aa9.44□□□□□ -0.9
SMC2-205ENST00000493955 ZKSCAN3Q9BRR0 538 aa9.44□□□□□ -0.9
SMC2-205ENST00000493955 COPRSQ9NQ92 184 aa9.44□□□□□ -0.9
SMC2-205ENST00000493955 KBTBD4Q9NVX7 518 aa9.44□□□□□ -0.9
SMC2-205ENST00000493955 TMEM238LA0A1B0GVL6 79 aa9.43□□□□□ -0.9
SMC2-205ENST00000493955 GJA8P48165 433 aa9.43□□□□□ -0.9
SMC2-205ENST00000493955 CCDC85BQ15834 202 aaPredicted RBP9.43□□□□□ -0.9
SMC2-205ENST00000493955 DTHD1Q6ZMT9 781 aa9.43□□□□□ -0.9
SMC2-205ENST00000493955 VPS37DQ86XT2 251 aa9.43□□□□□ -0.9
SMC2-205ENST00000493955 CCDC155Q8N6L0 562 aa9.43□□□□□ -0.9
SMC2-205ENST00000493955 BHMTQ93088 406 aa9.43□□□□□ -0.9
SMC2-205ENST00000493955 GMCL1Q96IK5 515 aa9.43□□□□□ -0.9
SMC2-205ENST00000493955 CNTNAP3BQ96NU0 1288 aa9.43□□□□□ -0.9
SMC2-205ENST00000493955 TCF12Q99081 682 aa9.43□□□□□ -0.9
SMC2-205ENST00000493955 OSMRQ99650 979 aa9.43□□□□□ -0.9
SMC2-205ENST00000493955 SLC30A3Q99726 388 aa9.43□□□□□ -0.9
SMC2-205ENST00000493955 CNTNAP3Q9BZ76 1288 aa9.43□□□□□ -0.9
SMC2-205ENST00000493955 CUEDC1Q9NWM3 386 aaPredicted RBP9.43□□□□□ -0.9
SMC2-205ENST00000493955 HCN2Q9UL51 889 aa9.43□□□□□ -0.9
SMC2-205ENST00000493955 ATXN7L1Q9ULK2 861 aaPredicted RBP9.43□□□□□ -0.9
SMC2-205ENST00000493955 CD33P20138 364 aa9.42□□□□□ -0.9
SMC2-205ENST00000493955 PWP1Q13610 501 aa9.42□□□□□ -0.9
SMC2-205ENST00000493955 COL13A1Q5TAT6 717 aaPredicted RBP9.42□□□□□ -0.9
SMC2-205ENST00000493955 CCNJLQ8IV13 435 aa9.42□□□□□ -0.9
SMC2-205ENST00000493955 ZNF837Q96EG3 531 aaPredicted RBP9.42□□□□□ -0.9
SMC2-205ENST00000493955 RSRP1Q9BUV0 290 aa9.42□□□□□ -0.9
SMC2-205ENST00000493955 GTF2F1P35269 517 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMC2-205ENST00000493955 PAK2Q13177 524 aa9.41□□□□□ -0.9
SMC2-205ENST00000493955 DHX32Q7L7V1 743 aaKnown RBP9.41□□□□□ -0.9
SMC2-205ENST00000493955 RAB44Q7Z6P3 723 aaPredicted RBP9.41□□□□□ -0.9
SMC2-205ENST00000493955 DHX38Q92620 1227 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms