RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 TRMT2AQ8IZ69 625 aaKnown RBP13.39□□□□□ -0.27
PDLIM1-205ENST00000493949 ZNF296Q8WUU4 475 aaPredicted RBP13.39□□□□□ -0.27
PDLIM1-205ENST00000493949 DPF2Q92785 391 aa13.39□□□□□ -0.27
PDLIM1-205ENST00000493949 RBM17Q96I25 401 aaKnown RBP13.39□□□□□ -0.27
PDLIM1-205ENST00000493949 HDAC9Q9UKV0 1011 aa13.39□□□□□ -0.27
PDLIM1-205ENST00000493949 ATP6V0A2Q9Y487 856 aa13.39□□□□□ -0.27
PDLIM1-205ENST00000493949 ANKRD36CQ5JPF3 1778 aa13.39□□□□□ -0.27
PDLIM1-205ENST00000493949 PAPPA2Q9BXP8 1791 aa13.39□□□□□ -0.27
PDLIM1-205ENST00000493949 SNRPA1P09661 255 aaKnown RBP13.38□□□□□ -0.27
PDLIM1-205ENST00000493949 AMER1Q5JTC6 1135 aaPredicted RBP13.38□□□□□ -0.27
PDLIM1-205ENST00000493949 DUSP27Q5VZP5 1158 aa13.38□□□□□ -0.27
PDLIM1-205ENST00000493949 GAS2L2Q8NHY3 880 aa13.38□□□□□ -0.27
PDLIM1-205ENST00000493949 LAMB2P55268 1798 aa13.37□□□□□ -0.27
PDLIM1-205ENST00000493949 SHTN1A0MZ66 631 aa13.37□□□□□ -0.27
PDLIM1-205ENST00000493949 BTBD11A6QL63 1104 aa13.37□□□□□ -0.27
PDLIM1-205ENST00000493949 ERVV-1B6SEH8 477 aa13.37□□□□□ -0.27
PDLIM1-205ENST00000493949 RAD17O75943 681 aa13.37□□□□□ -0.27
PDLIM1-205ENST00000493949 RASAL3Q86YV0 1011 aa13.37□□□□□ -0.27
PDLIM1-205ENST00000493949 MICALL2Q8IY33 904 aa13.37□□□□□ -0.27
PDLIM1-205ENST00000493949 KNSTRNQ9Y448 316 aa13.37□□□□□ -0.27
PDLIM1-205ENST00000493949 YDJCA8MPS7 323 aa13.36□□□□□ -0.27
PDLIM1-205ENST00000493949 CNGB1Q14028 1251 aaPredicted RBP13.36□□□□□ -0.27
PDLIM1-205ENST00000493949 PDE3AQ14432 1141 aa13.36□□□□□ -0.27
PDLIM1-205ENST00000493949 TMX4Q9H1E5 349 aaPredicted RBP13.36□□□□□ -0.27
PDLIM1-205ENST00000493949 BRCA2P51587 3418 aa13.36□□□□□ -0.27
PDLIM1-205ENST00000493949 COL3A1P02461 1466 aaPredicted RBP13.36□□□□□ -0.27
PDLIM1-205ENST00000493949 E9PSI1 815 aa13.35□□□□□ -0.27
PDLIM1-205ENST00000493949 DIAPH1O60610 1272 aaKnown RBP13.35□□□□□ -0.27
PDLIM1-205ENST00000493949 PPP2R1AP30153 589 aa13.35□□□□□ -0.27
PDLIM1-205ENST00000493949 CFHR5Q9BXR6 569 aa13.35□□□□□ -0.27
PDLIM1-205ENST00000493949 FARP1Q9Y4F1 1045 aaPredicted RBP13.35□□□□□ -0.27
PDLIM1-205ENST00000493949 LRRC37AA6NMS7 1700 aa13.35□□□□□ -0.27
PDLIM1-205ENST00000493949 DDX60Q8IY21 1712 aaKnown RBP13.35□□□□□ -0.27
PDLIM1-205ENST00000493949 COL6A3P12111 3177 aa13.34□□□□□ -0.27
PDLIM1-205ENST00000493949 DUOX1Q9NRD9 1551 aa13.34□□□□□ -0.27
PDLIM1-205ENST00000493949 ADM5C9JUS6 153 aa13.34□□□□□ -0.27
PDLIM1-205ENST00000493949 GPR25O00155 361 aa13.34□□□□□ -0.27
PDLIM1-205ENST00000493949 DLL1O00548 723 aa13.34□□□□□ -0.27
PDLIM1-205ENST00000493949 EGFRP00533 1210 aa13.34□□□□□ -0.27
PDLIM1-205ENST00000493949 SLFN5Q08AF3 891 aa13.34□□□□□ -0.27
PDLIM1-205ENST00000493949 INTS3Q68E01 1043 aaKnown RBP13.34□□□□□ -0.27
PDLIM1-205ENST00000493949 SAMD7Q7Z3H4 446 aa13.34□□□□□ -0.27
PDLIM1-205ENST00000493949 DCPSQ96C86 337 aaKnown RBP13.34□□□□□ -0.27
PDLIM1-205ENST00000493949 CDCA7LQ96GN5 454 aa13.34□□□□□ -0.27
PDLIM1-205ENST00000493949 UBN2Q6ZU65 1347 aa13.34□□□□□ -0.27
PDLIM1-205ENST00000493949 TBC1D8O95759 1140 aa13.33□□□□□ -0.28
PDLIM1-205ENST00000493949 TM4SF4P48230 202 aa13.33□□□□□ -0.28
PDLIM1-205ENST00000493949 FKBP1BP68106 108 aa13.33□□□□□ -0.28
PDLIM1-205ENST00000493949 NFKBIBQ15653 356 aa13.33□□□□□ -0.28
PDLIM1-205ENST00000493949 C8orf34Q49A92 452 aa13.33□□□□□ -0.28
PDLIM1-205ENST00000493949 CC2D1BQ5T0F9 858 aaKnown RBP13.33□□□□□ -0.28
PDLIM1-205ENST00000493949 DPP8Q6V1X1 898 aaPredicted RBP13.33□□□□□ -0.28
PDLIM1-205ENST00000493949 C3orf67Q6ZVT6 689 aa13.33□□□□□ -0.28
PDLIM1-205ENST00000493949 SP8Q8IXZ3 490 aa13.33□□□□□ -0.28
PDLIM1-205ENST00000493949 PHACTR3Q96KR7 559 aa13.33□□□□□ -0.28
PDLIM1-205ENST00000493949 TAF1P21675 1872 aa13.33□□□□□ -0.28
PDLIM1-205ENST00000493949 ABCC4O15439 1325 aa13.33□□□□□ -0.28
PDLIM1-205ENST00000493949 MAP3K15Q6ZN16 1313 aa13.33□□□□□ -0.28
PDLIM1-205ENST00000493949 POTEFA5A3E0 1075 aa13.32□□□□□ -0.28
PDLIM1-205ENST00000493949 U2SURPO15042 1029 aaKnown RBP13.32□□□□□ -0.28
PDLIM1-205ENST00000493949 BBOX1O75936 387 aa13.32□□□□□ -0.28
PDLIM1-205ENST00000493949 NTSR2O95665 410 aa13.32□□□□□ -0.28
PDLIM1-205ENST00000493949 RPS12P25398 132 aaKnown RBP13.32□□□□□ -0.28
PDLIM1-205ENST00000493949 BECN1Q14457 450 aa13.32□□□□□ -0.28
PDLIM1-205ENST00000493949 TBC1D10BQ4KMP7 808 aaPredicted RBP13.32□□□□□ -0.28
PDLIM1-205ENST00000493949 MPNDQ8N594 471 aa13.32□□□□□ -0.28
PDLIM1-205ENST00000493949 NLRP3Q96P20 1036 aa13.32□□□□□ -0.28
PDLIM1-205ENST00000493949 COLQQ9Y215 455 aaPredicted RBP13.32□□□□□ -0.28
PDLIM1-205ENST00000493949 RANBP2P49792 3224 aaKnown RBP13.32□□□□□ -0.28
PDLIM1-205ENST00000493949 CLCN6P51797 869 aa13.31□□□□□ -0.28
PDLIM1-205ENST00000493949 SLC10A5Q5PT55 438 aa13.31□□□□□ -0.28
PDLIM1-205ENST00000493949 SUSD4Q5VX71 490 aa13.31□□□□□ -0.28
PDLIM1-205ENST00000493949 ZNF34Q8IZ26 560 aa13.31□□□□□ -0.28
PDLIM1-205ENST00000493949 CDCA5Q96FF9 252 aa13.31□□□□□ -0.28
PDLIM1-205ENST00000493949 ADAMTS8Q9UP79 889 aa13.31□□□□□ -0.28
PDLIM1-205ENST00000493949 LAS1LQ9Y4W2 734 aaKnown RBP13.31□□□□□ -0.28
PDLIM1-205ENST00000493949 PSME4Q14997 1843 aa13.31□□□□□ -0.28
PDLIM1-205ENST00000493949 SCN9AQ15858 1988 aa13.31□□□□□ -0.28
PDLIM1-205ENST00000493949 LAMB1P07942 1786 aa13.3□□□□□ -0.28
PDLIM1-205ENST00000493949 PSMD14O00487 310 aa13.3□□□□□ -0.28
PDLIM1-205ENST00000493949 FKTNO75072 461 aa13.3□□□□□ -0.28
PDLIM1-205ENST00000493949 SULF1Q8IWU6 871 aa13.3□□□□□ -0.28
PDLIM1-205ENST00000493949 DLG5Q8TDM6 1919 aa13.29□□□□□ -0.28
PDLIM1-205ENST00000493949 DCTN1Q14203 1278 aa13.29□□□□□ -0.28
PDLIM1-205ENST00000493949 GPTP24298 496 aa13.28□□□□□ -0.28
PDLIM1-205ENST00000493949 KIF4BQ2VIQ3 1234 aa13.28□□□□□ -0.28
PDLIM1-205ENST00000493949 MCM10Q7L590 875 aa13.28□□□□□ -0.28
PDLIM1-205ENST00000493949 PPP1R42Q7Z4L9 355 aa13.28□□□□□ -0.28
PDLIM1-205ENST00000493949 GGA3Q9NZ52 723 aa13.28□□□□□ -0.28
PDLIM1-205ENST00000493949 ZNF609O15014 1411 aa13.28□□□□□ -0.28
PDLIM1-205ENST00000493949 KDM3BQ7LBC6 1761 aa13.27□□□□□ -0.28
PDLIM1-205ENST00000493949 PARP10Q53GL7 1025 aa13.27□□□□□ -0.29
PDLIM1-205ENST00000493949 GIGYF2Q6Y7W6 1299 aaKnown RBP13.27□□□□□ -0.29
PDLIM1-205ENST00000493949 KIF6Q6ZMV9 814 aa13.27□□□□□ -0.29
PDLIM1-205ENST00000493949 TTLL7Q6ZT98 887 aa13.27□□□□□ -0.29
PDLIM1-205ENST00000493949 FAM43AQ8N2R8 423 aa13.27□□□□□ -0.29
PDLIM1-205ENST00000493949 PRKAR2BP31323 418 aa13.26□□□□□ -0.29
PDLIM1-205ENST00000493949 L1TD1Q5T7N2 865 aaKnown RBP13.26□□□□□ -0.29
PDLIM1-205ENST00000493949 TMC4Q7Z404 712 aa13.26□□□□□ -0.29
PDLIM1-205ENST00000493949 SLC17A8Q8NDX2 589 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms