RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 GLYCTKQ8IVS8 523 aa7.15□□□□□ -1.26
CD46-217ENST00000493796 CCER1Q8TC90 406 aaPredicted RBP7.15□□□□□ -1.26
CD46-217ENST00000493796 TTC9Q92623 222 aa7.15□□□□□ -1.26
CD46-217ENST00000493796 TMEM63CQ9P1W3 806 aa7.15□□□□□ -1.26
CD46-217ENST00000493796 KRBA1A5PL33 1030 aa7.14□□□□□ -1.27
CD46-217ENST00000493796 A6NHS1 94 aa7.14□□□□□ -1.27
CD46-217ENST00000493796 SPDYE3A6NKU9 549 aa7.14□□□□□ -1.27
CD46-217ENST00000493796 USP5P45974 858 aa7.14□□□□□ -1.27
CD46-217ENST00000493796 C8orf34Q49A92 452 aa7.14□□□□□ -1.27
CD46-217ENST00000493796 KCTD17Q8N5Z5 321 aa7.14□□□□□ -1.27
CD46-217ENST00000493796 TTC16Q8NEE8 873 aa7.14□□□□□ -1.27
CD46-217ENST00000493796 SMG9Q9H0W8 520 aaKnown RBP7.14□□□□□ -1.27
CD46-217ENST00000493796 CCDC87Q9NVE4 849 aa7.14□□□□□ -1.27
CD46-217ENST00000493796 GHRHP01286 108 aa7.13□□□□□ -1.27
CD46-217ENST00000493796 CYP2E1P05181 493 aaPredicted RBP7.13□□□□□ -1.27
CD46-217ENST00000493796 HYAL2Q12891 473 aa7.13□□□□□ -1.27
CD46-217ENST00000493796 GRIK5Q16478 980 aa7.13□□□□□ -1.27
CD46-217ENST00000493796 COL13A1Q5TAT6 717 aaPredicted RBP7.13□□□□□ -1.27
CD46-217ENST00000493796 PLD4Q96BZ4 506 aa7.13□□□□□ -1.27
CD46-217ENST00000493796 GNEQ9Y223 722 aaKnown RBP7.13□□□□□ -1.27
CD46-217ENST00000493796 KIF4AO95239 1232 aa7.12□□□□□ -1.27
CD46-217ENST00000493796 SPATA31C1P0DKV0 1188 aa7.12□□□□□ -1.27
CD46-217ENST00000493796 ARHGAP4P98171 946 aa7.12□□□□□ -1.27
CD46-217ENST00000493796 PLA2G4EQ3MJ16 856 aa7.12□□□□□ -1.27
CD46-217ENST00000493796 ILDR2Q71H61 639 aa7.12□□□□□ -1.27
CD46-217ENST00000493796 GJD3Q8N144 294 aa7.12□□□□□ -1.27
CD46-217ENST00000493796 RBSNQ9H1K0 784 aa7.12□□□□□ -1.27
CD46-217ENST00000493796 CNTN3Q9P232 1028 aa7.12□□□□□ -1.27
CD46-217ENST00000493796 ITGB2P05107 769 aa7.11□□□□□ -1.27
CD46-217ENST00000493796 EHHADHQ08426 723 aa7.11□□□□□ -1.27
CD46-217ENST00000493796 PRRT3Q5FWE3 981 aa7.11□□□□□ -1.27
CD46-217ENST00000493796 TRAPPC3LQ5T215 181 aa7.11□□□□□ -1.27
CD46-217ENST00000493796 C1orf127Q8N9H9 656 aa7.11□□□□□ -1.27
CD46-217ENST00000493796 TRAIPQ9BWF2 469 aa7.11□□□□□ -1.27
CD46-217ENST00000493796 SOWAHDA6NJG2 315 aa7.1□□□□□ -1.27
CD46-217ENST00000493796 TRIM28Q13263 835 aaKnown RBP7.1□□□□□ -1.27
CD46-217ENST00000493796 MSL1Q68DK7 614 aa7.1□□□□□ -1.27
CD46-217ENST00000493796 KANSL3Q9P2N6 904 aa7.1□□□□□ -1.27
CD46-217ENST00000493796 BRPF3Q9ULD4 1205 aa7.1□□□□□ -1.27
CD46-217ENST00000493796 A0A0A0MRY4 1105 aa7.09□□□□□ -1.27
CD46-217ENST00000493796 FAM229AH3BQW9 127 aa7.09□□□□□ -1.27
CD46-217ENST00000493796 TNFRSF21O75509 655 aa7.09□□□□□ -1.27
CD46-217ENST00000493796 CES1P23141 567 aa7.09□□□□□ -1.27
CD46-217ENST00000493796 NCAPG2Q86XI2 1143 aa7.09□□□□□ -1.27
CD46-217ENST00000493796 DMRTC2Q8IXT2 367 aaPredicted RBP7.09□□□□□ -1.27
CD46-217ENST00000493796 CEP120Q8N960 986 aa7.09□□□□□ -1.27
CD46-217ENST00000493796 PMEPA1Q969W9 287 aa7.09□□□□□ -1.27
CD46-217ENST00000493796 SPACA7Q96KW9 195 aa7.09□□□□□ -1.27
CD46-217ENST00000493796 CHRDQ9H2X0 955 aa7.09□□□□□ -1.27
CD46-217ENST00000493796 SALL4Q9UJQ4 1053 aa7.09□□□□□ -1.27
CD46-217ENST00000493796 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.09□□□□□ -1.27
CD46-217ENST00000493796 NDUFB5O43674 189 aa7.08□□□□□ -1.28
CD46-217ENST00000493796 PHACTR2O75167 634 aa7.08□□□□□ -1.28
CD46-217ENST00000493796 ATP11AP98196 1134 aa7.08□□□□□ -1.28
CD46-217ENST00000493796 GPAT2Q6NUI2 795 aa7.08□□□□□ -1.28
CD46-217ENST00000493796 WFDC8Q8IUA0 241 aa7.08□□□□□ -1.28
CD46-217ENST00000493796 SNX29Q8TEQ0 813 aa7.08□□□□□ -1.28
CD46-217ENST00000493796 FOXD3Q9UJU5 478 aaPredicted RBP7.08□□□□□ -1.28
CD46-217ENST00000493796 IGHA1P01876 353 aa7.07□□□□□ -1.28
CD46-217ENST00000493796 BAG6P46379 1132 aa7.07□□□□□ -1.28
CD46-217ENST00000493796 RAC1P63000 192 aa7.07□□□□□ -1.28
CD46-217ENST00000493796 KCNA1Q09470 495 aa7.07□□□□□ -1.28
CD46-217ENST00000493796 GDF6Q6KF10 455 aaPredicted RBP7.07□□□□□ -1.28
CD46-217ENST00000493796 CD163Q86VB7 1156 aa7.07□□□□□ -1.28
CD46-217ENST00000493796 RASSF4Q9H2L5 321 aa7.07□□□□□ -1.28
CD46-217ENST00000493796 TRIM33Q9UPN9 1127 aa7.07□□□□□ -1.28
CD46-217ENST00000493796 C1QTNF9BB2RNN3 333 aa7.06□□□□□ -1.28
CD46-217ENST00000493796 EREGO14944 169 aa7.06□□□□□ -1.28
CD46-217ENST00000493796 SMNDC1O75940 238 aaKnown RBP eCLIP7.06□□□□□ -1.28
CD46-217ENST00000493796 CHRNA4P43681 627 aa7.06□□□□□ -1.28
CD46-217ENST00000493796 CEP135Q66GS9 1140 aa7.06□□□□□ -1.28
CD46-217ENST00000493796 FMR1NBQ8N0W7 255 aaPredicted RBP7.06□□□□□ -1.28
CD46-217ENST00000493796 CACTIN-AS1Q8N1I8 211 aa7.06□□□□□ -1.28
CD46-217ENST00000493796 DTWD1Q8N5C7 304 aa7.06□□□□□ -1.28
CD46-217ENST00000493796 IL22RA1Q8N6P7 574 aa7.06□□□□□ -1.28
CD46-217ENST00000493796 CITED4Q96RK1 184 aa7.06□□□□□ -1.28
CD46-217ENST00000493796 FAM129BQ96TA1 746 aa7.06□□□□□ -1.28
CD46-217ENST00000493796 PBX4Q9BYU1 374 aa7.06□□□□□ -1.28
CD46-217ENST00000493796 MSTNO14793 375 aa7.05□□□□□ -1.28
CD46-217ENST00000493796 APBA3O96018 575 aa7.05□□□□□ -1.28
CD46-217ENST00000493796 ACPPP15309 386 aa7.05□□□□□ -1.28
CD46-217ENST00000493796 ELNP15502 786 aa7.05□□□□□ -1.28
CD46-217ENST00000493796 PDE3BQ13370 1112 aa7.05□□□□□ -1.28
CD46-217ENST00000493796 GRIK4Q16099 956 aa7.05□□□□□ -1.28
CD46-217ENST00000493796 SPOCK3Q9BQ16 436 aa7.05□□□□□ -1.28
CD46-217ENST00000493796 ZFYVE28Q9HCC9 887 aa7.05□□□□□ -1.28
CD46-217ENST00000493796 IVNS1ABPQ9Y6Y0 642 aa7.05□□□□□ -1.28
CD46-217ENST00000493796 PROCP04070 461 aa7.04□□□□□ -1.28
CD46-217ENST00000493796 ADAMTSL4Q6UY14 1074 aa7.04□□□□□ -1.28
CD46-217ENST00000493796 FBXO11Q86XK2 927 aa7.04□□□□□ -1.28
CD46-217ENST00000493796 NACC1Q96RE7 527 aa7.04□□□□□ -1.28
CD46-217ENST00000493796 DZANK1Q9NVP4 752 aa7.04□□□□□ -1.28
CD46-217ENST00000493796 BIN2Q9UBW5 565 aaPredicted RBP7.04□□□□□ -1.28
CD46-217ENST00000493796 NFKBIEO00221 500 aa7.03□□□□□ -1.28
CD46-217ENST00000493796 IGHA2P01877 340 aa7.03□□□□□ -1.28
CD46-217ENST00000493796 EDN3P14138 238 aa7.03□□□□□ -1.28
CD46-217ENST00000493796 SELPP16109 830 aa7.03□□□□□ -1.28
CD46-217ENST00000493796 POP1Q99575 1024 aaKnown RBP7.03□□□□□ -1.28
CD46-217ENST00000493796 RBCK1Q9BYM8 510 aa7.03□□□□□ -1.28
CD46-217ENST00000493796 LACRTQ9GZZ8 138 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms