RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 HAUS7Q99871 368 aa8.9□□□□□ -0.98
BRCA1-221ENST00000493795 VAT1LQ9HCJ6 419 aa8.9□□□□□ -0.98
BRCA1-221ENST00000493795 TLDC2A0PJX2 215 aa8.9□□□□□ -0.98
BRCA1-221ENST00000493795 TUBBP07437 444 aa8.9□□□□□ -0.98
BRCA1-221ENST00000493795 CUL4BQ13620 913 aa8.9□□□□□ -0.98
BRCA1-221ENST00000493795 TMEM132EQ6IEE7 984 aa8.9□□□□□ -0.98
BRCA1-221ENST00000493795 SDCCAG8Q86SQ7 713 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-221ENST00000493795 TMEM57Q8N5G2 664 aa8.9□□□□□ -0.98
BRCA1-221ENST00000493795 IFT81Q8WYA0 676 aa8.9□□□□□ -0.98
BRCA1-221ENST00000493795 ZSCAN16Q9H4T2 348 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-221ENST00000493795 BAZ1AQ9NRL2 1556 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-221ENST00000493795 PSMA7O14818 248 aa8.9□□□□□ -0.98
BRCA1-221ENST00000493795 NCBP1Q09161 790 aaKnown RBP8.9□□□□□ -0.98
BRCA1-221ENST00000493795 IFIT5Q13325 482 aaKnown RBP8.9□□□□□ -0.98
BRCA1-221ENST00000493795 DACT3Q96B18 629 aaPredicted RBP8.9□□□□□ -0.98
BRCA1-221ENST00000493795 PPP1R12CQ9BZL4 782 aa8.9□□□□□ -0.98
BRCA1-221ENST00000493795 LDHCP07864 332 aa8.9□□□□□ -0.99
BRCA1-221ENST00000493795 SEL1L2Q5TEA6 688 aa8.9□□□□□ -0.99
BRCA1-221ENST00000493795 TMCO4Q5TGY1 634 aa8.9□□□□□ -0.99
BRCA1-221ENST00000493795 ANKRD24Q8TF21 1146 aa8.9□□□□□ -0.99
BRCA1-221ENST00000493795 UBLCP1Q8WVY7 318 aaPredicted RBP8.9□□□□□ -0.99
BRCA1-221ENST00000493795 SLC26A6Q9BXS9 759 aa8.9□□□□□ -0.99
BRCA1-221ENST00000493795 TSPYL2Q9H2G4 693 aaPredicted RBP8.9□□□□□ -0.99
BRCA1-221ENST00000493795 ARHGAP24Q8N264 748 aa8.89□□□□□ -0.99
BRCA1-221ENST00000493795 CCDC89Q8N998 374 aa8.89□□□□□ -0.99
BRCA1-221ENST00000493795 GABPB2Q8TAK5 448 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-221ENST00000493795 RPGRQ92834 1020 aaKnown RBP8.89□□□□□ -0.99
BRCA1-221ENST00000493795 TSGA10Q9BZW7 698 aa8.89□□□□□ -0.99
BRCA1-221ENST00000493795 TFIP11Q9UBB9 837 aaKnown RBP8.89□□□□□ -0.99
BRCA1-221ENST00000493795 ORC3Q9UBD5 711 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-221ENST00000493795 TSPY2A6NKD2 308 aa8.89□□□□□ -0.99
BRCA1-221ENST00000493795 VIMP08670 466 aaKnown RBP8.89□□□□□ -0.99
BRCA1-221ENST00000493795 CAPZA3Q96KX2 299 aa8.89□□□□□ -0.99
BRCA1-221ENST00000493795 PTGS1P23219 599 aa8.89□□□□□ -0.99
BRCA1-221ENST00000493795 TAF12Q16514 161 aa8.89□□□□□ -0.99
BRCA1-221ENST00000493795 C10orf67Q8IYJ2 551 aa8.89□□□□□ -0.99
BRCA1-221ENST00000493795 CSRNP2Q9H175 543 aa8.89□□□□□ -0.99
BRCA1-221ENST00000493795 BAG3O95817 575 aa8.89□□□□□ -0.99
BRCA1-221ENST00000493795 NOLC1Q14978 699 aaKnown RBP eCLIP8.89□□□□□ -0.99
BRCA1-221ENST00000493795 DPH6Q7L8W6 267 aa8.89□□□□□ -0.99
BRCA1-221ENST00000493795 HDXQ7Z353 690 aa8.89□□□□□ -0.99
BRCA1-221ENST00000493795 POTEDQ86YR6 584 aa8.89□□□□□ -0.99
BRCA1-221ENST00000493795 VCX3AQ9NNX9 186 aa8.89□□□□□ -0.99
BRCA1-221ENST00000493795 RASA3Q14644 834 aa8.89□□□□□ -0.99
BRCA1-221ENST00000493795 PSMD6Q15008 389 aa8.89□□□□□ -0.99
BRCA1-221ENST00000493795 UAP1Q16222 522 aaPredicted RBP8.89□□□□□ -0.99
BRCA1-221ENST00000493795 MFSD6Q6ZSS7 791 aa8.89□□□□□ -0.99
BRCA1-221ENST00000493795 FMNL3Q8IVF7 1028 aa8.89□□□□□ -0.99
BRCA1-221ENST00000493795 EVI5LQ96CN4 794 aa8.89□□□□□ -0.99
BRCA1-221ENST00000493795 HVCN1Q96D96 273 aa8.89□□□□□ -0.99
BRCA1-221ENST00000493795 MYD88Q99836 296 aa8.89□□□□□ -0.99
BRCA1-221ENST00000493795 GNAT3A8MTJ3 354 aa8.88□□□□□ -0.99
BRCA1-221ENST00000493795 CETN3O15182 167 aa8.88□□□□□ -0.99
BRCA1-221ENST00000493795 SMARCA5O60264 1052 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-221ENST00000493795 MCUR1Q96AQ8 359 aa8.88□□□□□ -0.99
BRCA1-221ENST00000493795 GIPC1O14908 333 aa8.88□□□□□ -0.99
BRCA1-221ENST00000493795 AFMP43652 599 aa8.88□□□□□ -0.99
BRCA1-221ENST00000493795 CCDC62Q6P9F0 684 aa8.88□□□□□ -0.99
BRCA1-221ENST00000493795 CCDC65Q8IXS2 484 aa8.88□□□□□ -0.99
BRCA1-221ENST00000493795 NEK11Q8NG66 645 aa8.88□□□□□ -0.99
BRCA1-221ENST00000493795 NCOA7Q8NI08 942 aa8.88□□□□□ -0.99
BRCA1-221ENST00000493795 TBC1D31Q96DN5 1066 aa8.88□□□□□ -0.99
BRCA1-221ENST00000493795 CCDC42Q96M95 316 aa8.88□□□□□ -0.99
BRCA1-221ENST00000493795 AKNAQ7Z591 1439 aa8.88□□□□□ -0.99
BRCA1-221ENST00000493795 SYT1P21579 422 aa8.88□□□□□ -0.99
BRCA1-221ENST00000493795 CCDC26Q8TAB7 109 aa8.88□□□□□ -0.99
BRCA1-221ENST00000493795 UBE2Q2Q8WVN8 375 aa8.88□□□□□ -0.99
BRCA1-221ENST00000493795 JPH4Q96JJ6 628 aa8.88□□□□□ -0.99
BRCA1-221ENST00000493795 FAM204AQ9H8W3 233 aa8.88□□□□□ -0.99
BRCA1-221ENST00000493795 BICDL2A1A5D9 508 aa8.88□□□□□ -0.99
BRCA1-221ENST00000493795 WDR46O15213 610 aaKnown RBP8.88□□□□□ -0.99
BRCA1-221ENST00000493795 SH3BGRP55822 239 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-221ENST00000493795 FLIIQ13045 1269 aa8.88□□□□□ -0.99
BRCA1-221ENST00000493795 RBM28Q9NW13 759 aaKnown RBP8.88□□□□□ -0.99
BRCA1-221ENST00000493795 HMG20BQ9P0W2 317 aa8.88□□□□□ -0.99
BRCA1-221ENST00000493795 MYOM3Q5VTT5 1437 aa8.88□□□□□ -0.99
BRCA1-221ENST00000493795 E7EVH7 732 aa8.87□□□□□ -0.99
BRCA1-221ENST00000493795 ERCC5P28715 1186 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-221ENST00000493795 ZSCAN23Q3MJ62 389 aa8.87□□□□□ -0.99
BRCA1-221ENST00000493795 PPP1R21Q6ZMI0 780 aa8.87□□□□□ -0.99
BRCA1-221ENST00000493795 KCNG4Q8TDN1 519 aa8.87□□□□□ -0.99
BRCA1-221ENST00000493795 ASIC1P78348 528 aa8.87□□□□□ -0.99
BRCA1-221ENST00000493795 CCDC38Q502W7 563 aa8.87□□□□□ -0.99
BRCA1-221ENST00000493795 CCDC94Q9BW85 323 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-221ENST00000493795 CCDC88BA6NC98 1476 aa8.87□□□□□ -0.99
BRCA1-221ENST00000493795 ZNF131P52739 623 aa8.87□□□□□ -0.99
BRCA1-221ENST00000493795 ARID5AQ03989 594 aa8.87□□□□□ -0.99
BRCA1-221ENST00000493795 ANO6Q4KMQ2 910 aa8.87□□□□□ -0.99
BRCA1-221ENST00000493795 SEPT8Q92599 483 aa8.87□□□□□ -0.99
BRCA1-221ENST00000493795 ARHGEF2Q92974 986 aaKnown RBP8.87□□□□□ -0.99
BRCA1-221ENST00000493795 VTI1AQ96AJ9 217 aa8.87□□□□□ -0.99
BRCA1-221ENST00000493795 GDPD2Q9HCC8 539 aa8.87□□□□□ -0.99
BRCA1-221ENST00000493795 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.87□□□□□ -0.99
BRCA1-221ENST00000493795 GSTO1P78417 241 aa8.87□□□□□ -0.99
BRCA1-221ENST00000493795 ITIH3Q06033 890 aa8.87□□□□□ -0.99
BRCA1-221ENST00000493795 MICU3Q86XE3 530 aa8.87□□□□□ -0.99
BRCA1-221ENST00000493795 AFAP1L1Q8TED9 768 aa8.87□□□□□ -0.99
BRCA1-221ENST00000493795 PRAM1Q96QH2 718 aa8.87□□□□□ -0.99
BRCA1-221ENST00000493795 BCAP29Q9UHQ4 241 aa8.87□□□□□ -0.99
BRCA1-221ENST00000493795 POLA1P09884 1462 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 261.4 ms