RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 XDHP47989 1333 aa17.47■□□□□ 0.39
CCM2-217ENST00000492883 SNED1Q8TER0 1413 aa17.47■□□□□ 0.39
CCM2-217ENST00000492883 RIMBP2O15034 1052 aa17.47■□□□□ 0.39
CCM2-217ENST00000492883 UFL1O94874 794 aa17.47■□□□□ 0.39
CCM2-217ENST00000492883 ATP2B4P23634 1241 aa17.47■□□□□ 0.39
CCM2-217ENST00000492883 DPY19L2Q6NUT2 758 aa17.47■□□□□ 0.39
CCM2-217ENST00000492883 ZNF784Q8NCA9 323 aaPredicted RBP17.47■□□□□ 0.39
CCM2-217ENST00000492883 TBC1D16Q8TBP0 767 aa17.47■□□□□ 0.39
CCM2-217ENST00000492883 ANKRD2Q9GZV1 360 aa17.47■□□□□ 0.39
CCM2-217ENST00000492883 ZC3H4Q9UPT8 1303 aaKnown RBP17.47■□□□□ 0.39
CCM2-217ENST00000492883 ZBTB7BO15156 539 aaPredicted RBP17.46■□□□□ 0.39
CCM2-217ENST00000492883 CHRNDQ07001 517 aa17.46■□□□□ 0.39
CCM2-217ENST00000492883 NIM1KQ8IY84 436 aa17.46■□□□□ 0.39
CCM2-217ENST00000492883 ZC3H12CQ9C0D7 883 aaKnown RBP17.46■□□□□ 0.39
CCM2-217ENST00000492883 G3V3G9 751 aa17.45■□□□□ 0.38
CCM2-217ENST00000492883 KIAA2012Q0VF49 1180 aa17.45■□□□□ 0.38
CCM2-217ENST00000492883 DCAF8Q5TAQ9 597 aa17.45■□□□□ 0.38
CCM2-217ENST00000492883 LEMD3Q9Y2U8 911 aa17.45■□□□□ 0.38
CCM2-217ENST00000492883 COG6Q9Y2V7 657 aa17.45■□□□□ 0.38
CCM2-217ENST00000492883 COL4A1P02462 1669 aa17.45■□□□□ 0.38
CCM2-217ENST00000492883 KCNJ4P48050 445 aa17.44■□□□□ 0.38
CCM2-217ENST00000492883 PDE3AQ14432 1141 aa17.44■□□□□ 0.38
CCM2-217ENST00000492883 MVPQ14764 893 aaKnown RBP17.44■□□□□ 0.38
CCM2-217ENST00000492883 HELBQ8NG08 1087 aaPredicted RBP17.44■□□□□ 0.38
CCM2-217ENST00000492883 KLHDC4Q8TBB5 520 aa17.44■□□□□ 0.38
CCM2-217ENST00000492883 GPR101Q96P66 508 aaPredicted RBP17.44■□□□□ 0.38
CCM2-217ENST00000492883 GPBP1L1Q9HC44 474 aaPredicted RBP17.44■□□□□ 0.38
CCM2-217ENST00000492883 KDM2BQ8NHM5 1336 aa17.44■□□□□ 0.38
CCM2-217ENST00000492883 GLTPD2A6NH11 291 aa17.43■□□□□ 0.38
CCM2-217ENST00000492883 FZD9O00144 591 aa17.43■□□□□ 0.38
CCM2-217ENST00000492883 TAF5LO75529 589 aa17.43■□□□□ 0.38
CCM2-217ENST00000492883 EIF6P56537 245 aaKnown RBP17.43■□□□□ 0.38
CCM2-217ENST00000492883 PUS3Q9BZE2 481 aaKnown RBP17.43■□□□□ 0.38
CCM2-217ENST00000492883 DDX19BQ9UMR2 479 aa17.43■□□□□ 0.38
CCM2-217ENST00000492883 CACNA1SQ13698 1873 aa17.43■□□□□ 0.38
CCM2-217ENST00000492883 WTIPA6NIX2 430 aaPredicted RBP17.42■□□□□ 0.38
CCM2-217ENST00000492883 SRGAP3O43295 1099 aa17.42■□□□□ 0.38
CCM2-217ENST00000492883 RFX5P48382 616 aaPredicted RBP17.42■□□□□ 0.38
CCM2-217ENST00000492883 DOK7Q18PE1 504 aa17.42■□□□□ 0.38
CCM2-217ENST00000492883 LRRC24Q50LG9 513 aa17.42■□□□□ 0.38
CCM2-217ENST00000492883 C20orf194Q5TEA3 1177 aa17.42■□□□□ 0.38
CCM2-217ENST00000492883 CHMP4BQ9H444 224 aaKnown RBP17.42■□□□□ 0.38
CCM2-217ENST00000492883 C1orf115Q9H7X2 142 aa17.42■□□□□ 0.38
CCM2-217ENST00000492883 ZNRF3Q9ULT6 936 aa17.42■□□□□ 0.38
CCM2-217ENST00000492883 RIPOR2Q9Y4F9 1068 aa17.42■□□□□ 0.38
CCM2-217ENST00000492883 ZNF804BA4D1E1 1349 aa17.42■□□□□ 0.38
CCM2-217ENST00000492883 PTPN12Q05209 780 aaKnown RBP17.41■□□□□ 0.38
CCM2-217ENST00000492883 METTL24Q5JXM2 366 aa17.41■□□□□ 0.38
CCM2-217ENST00000492883 MROH5Q6ZUA9 1318 aa17.41■□□□□ 0.38
CCM2-217ENST00000492883 TAF1P21675 1872 aa17.4■□□□□ 0.38
CCM2-217ENST00000492883 FER1L6Q2WGJ9 1857 aa17.4■□□□□ 0.38
CCM2-217ENST00000492883 EYA2O00167 538 aa17.4■□□□□ 0.38
CCM2-217ENST00000492883 DDNO94850 711 aaPredicted RBP17.4■□□□□ 0.38
CCM2-217ENST00000492883 RRP1P56182 461 aaKnown RBP17.4■□□□□ 0.38
CCM2-217ENST00000492883 MTX1Q13505 466 aa17.4■□□□□ 0.38
CCM2-217ENST00000492883 SIL1Q9H173 461 aa17.4■□□□□ 0.38
CCM2-217ENST00000492883 DBNDD1Q9H9R9 158 aa17.4■□□□□ 0.38
CCM2-217ENST00000492883 GOLGB1Q14789 3259 aaKnown RBP17.39■□□□□ 0.38
CCM2-217ENST00000492883 SNAP23O00161 211 aa17.39■□□□□ 0.37
CCM2-217ENST00000492883 PA2G4Q9UQ80 394 aaKnown RBP17.39■□□□□ 0.37
CCM2-217ENST00000492883 GJA3Q9Y6H8 435 aa17.39■□□□□ 0.37
CCM2-217ENST00000492883 ZNF541Q9H0D2 1346 aa17.39■□□□□ 0.37
CCM2-217ENST00000492883 PNMA6EA0A0J9YXQ4 647 aa17.38■□□□□ 0.37
CCM2-217ENST00000492883 ECE2O60344 883 aa17.38■□□□□ 0.37
CCM2-217ENST00000492883 ATP8B2P98198 1209 aa17.38■□□□□ 0.37
CCM2-217ENST00000492883 RRAGCQ9HB90 399 aa17.38■□□□□ 0.37
CCM2-217ENST00000492883 COPRSQ9NQ92 184 aa17.38■□□□□ 0.37
CCM2-217ENST00000492883 FBXO3Q9UK99 471 aa17.38■□□□□ 0.37
CCM2-217ENST00000492883 CHD4Q14839 1912 aa17.38■□□□□ 0.37
CCM2-217ENST00000492883 RAD17O75943 681 aa17.37■□□□□ 0.37
CCM2-217ENST00000492883 CIAO1O76071 339 aa17.37■□□□□ 0.37
CCM2-217ENST00000492883 CXCL9Q07325 125 aa17.37■□□□□ 0.37
CCM2-217ENST00000492883 CIAPIN1Q6FI81 312 aa17.37■□□□□ 0.37
CCM2-217ENST00000492883 GPC2Q8N158 579 aa17.37■□□□□ 0.37
CCM2-217ENST00000492883 NMRK2Q9NPI5 230 aa17.37■□□□□ 0.37
CCM2-217ENST00000492883 UTRNP46939 3433 aa17.37■□□□□ 0.37
CCM2-217ENST00000492883 YDJCA8MPS7 323 aa17.36■□□□□ 0.37
CCM2-217ENST00000492883 PDE8BO95263 885 aa17.36■□□□□ 0.37
CCM2-217ENST00000492883 IL15P40933 162 aaPredicted RBP17.36■□□□□ 0.37
CCM2-217ENST00000492883 UBE4AQ14139 1066 aa17.36■□□□□ 0.37
CCM2-217ENST00000492883 TNIP1Q15025 636 aa17.36■□□□□ 0.37
CCM2-217ENST00000492883 TXNRD3Q86VQ6 643 aa17.36■□□□□ 0.37
CCM2-217ENST00000492883 ZBTB40Q9NUA8 1239 aa17.36■□□□□ 0.37
CCM2-217ENST00000492883 CEP126Q9P2H0 1117 aa17.36■□□□□ 0.37
CCM2-217ENST00000492883 MED23Q9ULK4 1368 aa17.36■□□□□ 0.37
CCM2-217ENST00000492883 DUOX1Q9NRD9 1551 aa17.36■□□□□ 0.37
CCM2-217ENST00000492883 LRRC37AA6NMS7 1700 aa17.35■□□□□ 0.37
CCM2-217ENST00000492883 MYH3P11055 1940 aa17.35■□□□□ 0.37
CCM2-217ENST00000492883 VEGFAP15692 232 aaPredicted RBP17.35■□□□□ 0.37
CCM2-217ENST00000492883 KLRK1P26718 216 aa17.35■□□□□ 0.37
CCM2-217ENST00000492883 G3BP1Q13283 466 aaKnown RBP eCLIP17.35■□□□□ 0.37
CCM2-217ENST00000492883 ATG9AQ7Z3C6 839 aa17.35■□□□□ 0.37
CCM2-217ENST00000492883 PODNQ7Z5L7 613 aa17.35■□□□□ 0.37
CCM2-217ENST00000492883 COA1Q9GZY4 146 aa17.35■□□□□ 0.37
CCM2-217ENST00000492883 COL4A5P29400 1685 aa17.35■□□□□ 0.37
CCM2-217ENST00000492883 POLA2Q14181 598 aa17.34■□□□□ 0.37
CCM2-217ENST00000492883 CEP85Q6P2H3 762 aa17.34■□□□□ 0.37
CCM2-217ENST00000492883 C15orf52Q6ZUT6 534 aaKnown RBP17.34■□□□□ 0.37
CCM2-217ENST00000492883 KCNQ5Q9NR82 932 aa17.34■□□□□ 0.37
CCM2-217ENST00000492883 SBF1O95248 1867 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms