RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 TSGA10IPQ3SY00 556 aa15.3■□□□□ 0.04
PRAME-213ENST00000492657 TMEM87AQ8NBN3 555 aa15.3■□□□□ 0.04
PRAME-213ENST00000492657 HMG20BQ9P0W2 317 aa15.3■□□□□ 0.04
PRAME-213ENST00000492657 GPTP24298 496 aa15.3■□□□□ 0.04
PRAME-213ENST00000492657 ADORA1P30542 326 aa15.3■□□□□ 0.04
PRAME-213ENST00000492657 NEK1Q96PY6 1258 aa15.3■□□□□ 0.04
PRAME-213ENST00000492657 HLFQ16534 295 aa15.3■□□□□ 0.04
PRAME-213ENST00000492657 STOX1Q6ZVD7 989 aa15.3■□□□□ 0.04
PRAME-213ENST00000492657 CDC37L1Q7L3B6 337 aa15.3■□□□□ 0.04
PRAME-213ENST00000492657 PDCL3Q9H2J4 239 aa15.3■□□□□ 0.04
PRAME-213ENST00000492657 PAPPAQ13219 1627 aa15.29■□□□□ 0.04
PRAME-213ENST00000492657 JAK2O60674 1132 aa15.29■□□□□ 0.04
PRAME-213ENST00000492657 IFIT1P09914 478 aaKnown RBP15.29■□□□□ 0.04
PRAME-213ENST00000492657 Q6ZUG5 572 aa15.29■□□□□ 0.04
PRAME-213ENST00000492657 SLC4A9Q96Q91 983 aa15.29■□□□□ 0.04
PRAME-213ENST00000492657 U3KPZ7 1027 aaPredicted RBP15.29■□□□□ 0.04
PRAME-213ENST00000492657 TPM2P07951 284 aa15.28■□□□□ 0.04
PRAME-213ENST00000492657 CCDC57Q2TAC2 916 aa15.28■□□□□ 0.04
PRAME-213ENST00000492657 TSPY26PQ9H489 355 aa15.28■□□□□ 0.04
PRAME-213ENST00000492657 GPR108Q9NPR9 543 aa15.28■□□□□ 0.04
PRAME-213ENST00000492657 CEP126Q9P2H0 1117 aa15.28■□□□□ 0.04
PRAME-213ENST00000492657 ANKRD1Q15327 319 aa15.28■□□□□ 0.04
PRAME-213ENST00000492657 FKBP4Q02790 459 aaKnown RBP eCLIP15.27■□□□□ 0.04
PRAME-213ENST00000492657 SYAP1Q96A49 352 aaPredicted RBP15.27■□□□□ 0.04
PRAME-213ENST00000492657 SYTL4Q96C24 671 aaPredicted RBP15.27■□□□□ 0.04
PRAME-213ENST00000492657 UBE2HP62256 183 aa15.27■□□□□ 0.03
PRAME-213ENST00000492657 KIF6Q6ZMV9 814 aa15.27■□□□□ 0.03
PRAME-213ENST00000492657 ALDH8A1Q9H2A2 487 aaPredicted RBP15.27■□□□□ 0.03
PRAME-213ENST00000492657 ATP6V1DQ9Y5K8 247 aa15.27■□□□□ 0.03
PRAME-213ENST00000492657 CIAO1O76071 339 aa15.26■□□□□ 0.03
PRAME-213ENST00000492657 SH3TC1Q8TE82 1336 aa15.26■□□□□ 0.03
PRAME-213ENST00000492657 SCARF1Q14162 830 aa15.26■□□□□ 0.03
PRAME-213ENST00000492657 KRT32Q14532 448 aa15.26■□□□□ 0.03
PRAME-213ENST00000492657 ZMYM1Q5SVZ6 1142 aa15.26■□□□□ 0.03
PRAME-213ENST00000492657 TSC1Q92574 1164 aa15.26■□□□□ 0.03
PRAME-213ENST00000492657 BRF1Q92994 677 aa15.26■□□□□ 0.03
PRAME-213ENST00000492657 STARD3NLO95772 234 aa15.25■□□□□ 0.03
PRAME-213ENST00000492657 HSP90B1P14625 803 aaKnown RBP15.25■□□□□ 0.03
PRAME-213ENST00000492657 TTLL5Q6EMB2 1281 aa15.25■□□□□ 0.03
PRAME-213ENST00000492657 PI16Q6UXB8 463 aa15.25■□□□□ 0.03
PRAME-213ENST00000492657 DDX11Q96FC9 970 aa15.25■□□□□ 0.03
PRAME-213ENST00000492657 XAGE2Q96GT9 111 aa15.25■□□□□ 0.03
PRAME-213ENST00000492657 PDLIM2Q96JY6 352 aa15.25■□□□□ 0.03
PRAME-213ENST00000492657 RFX7Q2KHR2 1363 aa15.25■□□□□ 0.03
PRAME-213ENST00000492657 MAST3O60307 1309 aa15.25■□□□□ 0.03
PRAME-213ENST00000492657 M0R2C6 588 aa15.25■□□□□ 0.03
PRAME-213ENST00000492657 PCCAP05165 728 aaPredicted RBP15.25■□□□□ 0.03
PRAME-213ENST00000492657 TAF7LQ5H9L4 462 aa15.25■□□□□ 0.03
PRAME-213ENST00000492657 GORABQ5T7V8 394 aa15.25■□□□□ 0.03
PRAME-213ENST00000492657 TFIP11Q9UBB9 837 aaKnown RBP15.25■□□□□ 0.03
PRAME-213ENST00000492657 PALLDQ8WX93 1383 aa15.25■□□□□ 0.03
PRAME-213ENST00000492657 UQCRHLA0A096LP55 91 aa15.25■□□□□ 0.03
PRAME-213ENST00000492657 RNF113AO15541 343 aaKnown RBP15.25■□□□□ 0.03
PRAME-213ENST00000492657 PPFIA3O75145 1194 aa15.25■□□□□ 0.03
PRAME-213ENST00000492657 OFD1O75665 1012 aa15.25■□□□□ 0.03
PRAME-213ENST00000492657 UQCRHP07919 91 aa15.25■□□□□ 0.03
PRAME-213ENST00000492657 HSPD1P10809 573 aaKnown RBP15.25■□□□□ 0.03
PRAME-213ENST00000492657 TRIM28Q13263 835 aaKnown RBP15.25■□□□□ 0.03
PRAME-213ENST00000492657 HSP90AB3PQ58FF7 597 aa15.25■□□□□ 0.03
PRAME-213ENST00000492657 CCDC183Q5T5S1 534 aa15.25■□□□□ 0.03
PRAME-213ENST00000492657 CHST3Q7LGC8 479 aa15.25■□□□□ 0.03
PRAME-213ENST00000492657 TTC6Q86TZ1 520 aa15.25■□□□□ 0.03
PRAME-213ENST00000492657 OSBP2Q969R2 916 aa15.25■□□□□ 0.03
PRAME-213ENST00000492657 HELLSQ9NRZ9 838 aa15.25■□□□□ 0.03
PRAME-213ENST00000492657 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.25■□□□□ 0.03
PRAME-213ENST00000492657 A0A0U1RQG5 324 aaPredicted RBP15.24■□□□□ 0.03
PRAME-213ENST00000492657 GTF3C6Q969F1 213 aa15.24■□□□□ 0.03
PRAME-213ENST00000492657 ZBTB1Q9Y2K1 713 aa15.24■□□□□ 0.03
PRAME-213ENST00000492657 MAP3K15Q6ZN16 1313 aa15.24■□□□□ 0.03
PRAME-213ENST00000492657 FGD1P98174 961 aa15.24■□□□□ 0.03
PRAME-213ENST00000492657 GIMAP6Q6P9H5 292 aa15.24■□□□□ 0.03
PRAME-213ENST00000492657 GIGYF2Q6Y7W6 1299 aaKnown RBP15.24■□□□□ 0.03
PRAME-213ENST00000492657 ZBTB38Q8NAP3 1195 aaPredicted RBP15.24■□□□□ 0.03
PRAME-213ENST00000492657 ITGB4P16144 1822 aa15.23■□□□□ 0.03
PRAME-213ENST00000492657 FAM177BA6PVY3 158 aa15.23■□□□□ 0.03
PRAME-213ENST00000492657 CSF1RP07333 972 aa15.23■□□□□ 0.03
PRAME-213ENST00000492657 CYP19A1P11511 503 aaPredicted RBP15.23■□□□□ 0.03
PRAME-213ENST00000492657 FOSBP53539 338 aa15.23■□□□□ 0.03
PRAME-213ENST00000492657 IFIT5Q13325 482 aaKnown RBP15.23■□□□□ 0.03
PRAME-213ENST00000492657 TTC39AQ5SRH9 613 aa15.23■□□□□ 0.03
PRAME-213ENST00000492657 TEX13AQ9BXU3 409 aaPredicted RBP15.23■□□□□ 0.03
PRAME-213ENST00000492657 GREM2Q9H772 168 aa15.23■□□□□ 0.03
PRAME-213ENST00000492657 ZHX1Q9UKY1 873 aaPredicted RBP15.23■□□□□ 0.03
PRAME-213ENST00000492657 TBC1D2BQ9UPU7 963 aa15.23■□□□□ 0.03
PRAME-213ENST00000492657 NLRP10Q86W26 655 aa15.23■□□□□ 0.03
PRAME-213ENST00000492657 A0A0G2JS52 829 aa15.22■□□□□ 0.03
PRAME-213ENST00000492657 APOBRQ0VD83 1088 aa15.22■□□□□ 0.03
PRAME-213ENST00000492657 SCRN1Q12765 414 aa15.22■□□□□ 0.03
PRAME-213ENST00000492657 PHF14O94880 888 aa15.22■□□□□ 0.03
PRAME-213ENST00000492657 PDCP20941 246 aa15.22■□□□□ 0.03
PRAME-213ENST00000492657 ZAP70P43403 619 aa15.22■□□□□ 0.03
PRAME-213ENST00000492657 CCDC158Q5M9N0 1113 aa15.22■□□□□ 0.03
PRAME-213ENST00000492657 DSCC1Q9BVC3 393 aa15.22■□□□□ 0.03
PRAME-213ENST00000492657 WASHC4Q2M389 1173 aa15.21■□□□□ 0.03
PRAME-213ENST00000492657 DHX32Q7L7V1 743 aaKnown RBP15.21■□□□□ 0.03
PRAME-213ENST00000492657 TTLL11Q8NHH1 800 aa15.21■□□□□ 0.03
PRAME-213ENST00000492657 PRDM4Q9UKN5 801 aa15.21■□□□□ 0.03
PRAME-213ENST00000492657 LAMA4Q16363 1823 aa15.21■□□□□ 0.03
PRAME-213ENST00000492657 NHSL1Q5SYE7 1610 aa15.21■□□□□ 0.03
PRAME-213ENST00000492657 E7EWF7 191 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms