RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 ALKBH8Q96BT7 664 aaKnown RBP4.42□□□□□ -1.7
SNX13-209ENST00000492626 CRELD1Q96HD1 420 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 UGGT1Q9NYU2 1555 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 PPM1GO15355 546 aaPredicted RBP4.42□□□□□ -1.7
SNX13-209ENST00000492626 FZD6O60353 706 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 CPNE3O75131 537 aaKnown RBP4.42□□□□□ -1.7
SNX13-209ENST00000492626 CLSTN1O94985 981 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 DNAJA1P31689 397 aaKnown RBP4.42□□□□□ -1.7
SNX13-209ENST00000492626 HDLBPQ00341 1268 aaKnown RBP4.42□□□□□ -1.7
SNX13-209ENST00000492626 RELBQ01201 579 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 MAP3K1Q13233 1512 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 NCOA2Q15596 1464 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 SOGA3Q5TF21 947 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 TREML1Q86YW5 311 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 RHBDD1Q8TEB9 315 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 CSRNP1Q96S65 589 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 FYCO1Q9BQS8 1478 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 TGIF2Q9GZN2 237 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 DNAJC25Q9H1X3 360 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 NWD2Q9ULI1 1742 aa4.42□□□□□ -1.7
SNX13-209ENST00000492626 TTC24A2A3L6 582 aaPredicted RBP4.41□□□□□ -1.7
SNX13-209ENST00000492626 GIPC1O14908 333 aa4.41□□□□□ -1.7
SNX13-209ENST00000492626 EPHA4P54764 986 aa4.41□□□□□ -1.7
SNX13-209ENST00000492626 DAB2P98082 770 aa4.41□□□□□ -1.7
SNX13-209ENST00000492626 ENOX2Q16206 610 aaKnown RBP4.41□□□□□ -1.7
SNX13-209ENST00000492626 FAM177A1Q8N128 213 aaPredicted RBP4.41□□□□□ -1.7
SNX13-209ENST00000492626 FAM129BQ96TA1 746 aa4.41□□□□□ -1.7
SNX13-209ENST00000492626 KLK14Q9P0G3 267 aa4.41□□□□□ -1.7
SNX13-209ENST00000492626 CENPCQ03188 943 aa4.41□□□□□ -1.7
SNX13-209ENST00000492626 MRPL58Q14197 206 aaKnown RBP4.41□□□□□ -1.7
SNX13-209ENST00000492626 ATCAYQ86WG3 371 aa4.41□□□□□ -1.7
SNX13-209ENST00000492626 NUDT16Q96DE0 195 aaKnown RBP4.41□□□□□ -1.7
SNX13-209ENST00000492626 INO80Q9ULG1 1556 aaPredicted RBP4.41□□□□□ -1.7
SNX13-209ENST00000492626 ATRNO75882 1429 aa4.41□□□□□ -1.7
SNX13-209ENST00000492626 ZNF335Q9H4Z2 1342 aaPredicted RBP4.41□□□□□ -1.7
SNX13-209ENST00000492626 WNT7AO00755 349 aa4.41□□□□□ -1.7
SNX13-209ENST00000492626 PDGFAP04085 211 aa4.41□□□□□ -1.7
SNX13-209ENST00000492626 PTGIRP43119 386 aa4.41□□□□□ -1.7
SNX13-209ENST00000492626 PLA2G4AP47712 749 aa4.41□□□□□ -1.7
SNX13-209ENST00000492626 FOXK2Q01167 660 aa4.41□□□□□ -1.7
SNX13-209ENST00000492626 ARID5AQ03989 594 aa4.41□□□□□ -1.7
SNX13-209ENST00000492626 HS2ST1Q7LGA3 356 aa4.41□□□□□ -1.7
SNX13-209ENST00000492626 PRKAG2Q9UGJ0 569 aa4.41□□□□□ -1.7
SNX13-209ENST00000492626 PRDM15P57071 1507 aaPredicted RBP4.41□□□□□ -1.7
SNX13-209ENST00000492626 EML1O00423 815 aa4.4□□□□□ -1.7
SNX13-209ENST00000492626 GPR182O15218 404 aa4.4□□□□□ -1.7
SNX13-209ENST00000492626 NNTQ13423 1086 aa4.4□□□□□ -1.7
SNX13-209ENST00000492626 DSC3Q14574 896 aa4.4□□□□□ -1.7
SNX13-209ENST00000492626 C1orf53Q5VUE5 145 aa4.4□□□□□ -1.7
SNX13-209ENST00000492626 QTRT2Q9H974 415 aaKnown RBP4.4□□□□□ -1.7
SNX13-209ENST00000492626 GGT7Q9UJ14 662 aa4.4□□□□□ -1.7
SNX13-209ENST00000492626 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.4□□□□□ -1.7
SNX13-209ENST00000492626 TMA7Q9Y2S6 64 aaKnown RBP4.4□□□□□ -1.7
SNX13-209ENST00000492626 EIF2AK4Q9P2K8 1649 aaKnown RBP4.4□□□□□ -1.7
SNX13-209ENST00000492626 LILRA1O75019 489 aa4.4□□□□□ -1.7
SNX13-209ENST00000492626 GADD45BO75293 160 aaPredicted RBP4.4□□□□□ -1.7
SNX13-209ENST00000492626 WDR4P57081 412 aaKnown RBP4.4□□□□□ -1.7
SNX13-209ENST00000492626 ARSJQ5FYB0 599 aaPredicted RBP4.4□□□□□ -1.7
SNX13-209ENST00000492626 ZNF654Q8IZM8 581 aa4.4□□□□□ -1.7
SNX13-209ENST00000492626 DLC1Q96QB1 1528 aa4.4□□□□□ -1.7
SNX13-209ENST00000492626 KIDINS220Q9ULH0 1771 aa4.4□□□□□ -1.7
SNX13-209ENST00000492626 QSER1Q2KHR3 1735 aa4.4□□□□□ -1.71
SNX13-209ENST00000492626 PREX2Q70Z35 1606 aa4.4□□□□□ -1.71
SNX13-209ENST00000492626 EIF1AYO14602 144 aaKnown RBP4.4□□□□□ -1.71
SNX13-209ENST00000492626 PHACTR2O75167 634 aa4.4□□□□□ -1.71
SNX13-209ENST00000492626 SLC19A1P41440 591 aa4.4□□□□□ -1.71
SNX13-209ENST00000492626 GRM5P41594 1212 aa4.4□□□□□ -1.71
SNX13-209ENST00000492626 FOXC1Q12948 553 aa4.4□□□□□ -1.71
SNX13-209ENST00000492626 HIRIP3Q9BW71 556 aaPredicted RBP4.4□□□□□ -1.71
SNX13-209ENST00000492626 PARP3Q9Y6F1 533 aa4.4□□□□□ -1.71
SNX13-209ENST00000492626 YTHDC2Q9H6S0 1430 aaKnown RBP4.4□□□□□ -1.71
SNX13-209ENST00000492626 USP32Q8NFA0 1604 aa4.4□□□□□ -1.71
SNX13-209ENST00000492626 ABCC1P33527 1531 aa4.4□□□□□ -1.71
SNX13-209ENST00000492626 SYCP2Q9BX26 1530 aa4.4□□□□□ -1.71
SNX13-209ENST00000492626 C11orf95C9JLR9 678 aaPredicted RBP4.39□□□□□ -1.71
SNX13-209ENST00000492626 TNFRSF10BO14763 440 aa4.39□□□□□ -1.71
SNX13-209ENST00000492626 STK10O94804 968 aaKnown RBP4.39□□□□□ -1.71
SNX13-209ENST00000492626 IL2RAP01589 272 aa4.39□□□□□ -1.71
SNX13-209ENST00000492626 ECM1Q16610 540 aa4.39□□□□□ -1.71
SNX13-209ENST00000492626 ZNF438Q7Z4V0 828 aa4.39□□□□□ -1.71
SNX13-209ENST00000492626 WWC3Q9ULE0 1092 aa4.39□□□□□ -1.71
SNX13-209ENST00000492626 PPP1R18Q6NYC8 613 aa4.39□□□□□ -1.71
SNX13-209ENST00000492626 CYP4X1Q8N118 509 aa4.39□□□□□ -1.71
SNX13-209ENST00000492626 CMTR1Q8N1G2 835 aaKnown RBP4.39□□□□□ -1.71
SNX13-209ENST00000492626 ABCC5O15440 1437 aa4.39□□□□□ -1.71
SNX13-209ENST00000492626 PPARGC1BQ86YN6 1023 aaKnown RBP4.39□□□□□ -1.71
SNX13-209ENST00000492626 GJD3Q8N144 294 aa4.39□□□□□ -1.71
SNX13-209ENST00000492626 SNX29Q8TEQ0 813 aa4.39□□□□□ -1.71
SNX13-209ENST00000492626 POLMQ9NP87 494 aaPredicted RBP4.39□□□□□ -1.71
SNX13-209ENST00000492626 AK5Q9Y6K8 562 aa4.39□□□□□ -1.71
SNX13-209ENST00000492626 TGFBR3LH3BV60 316 aa4.38□□□□□ -1.71
SNX13-209ENST00000492626 SMARCA5O60264 1052 aaPredicted RBP4.38□□□□□ -1.71
SNX13-209ENST00000492626 ZIC2O95409 532 aaPredicted RBP4.38□□□□□ -1.71
SNX13-209ENST00000492626 HIRAP54198 1017 aaPredicted RBP4.38□□□□□ -1.71
SNX13-209ENST00000492626 USP48Q86UV5 1035 aa4.38□□□□□ -1.71
SNX13-209ENST00000492626 MRGPRX2Q96LB1 330 aa4.38□□□□□ -1.71
SNX13-209ENST00000492626 MICAL2O94851 1124 aa4.38□□□□□ -1.71
SNX13-209ENST00000492626 ADD1P35611 737 aaKnown RBP4.38□□□□□ -1.71
SNX13-209ENST00000492626 ARSDP51689 593 aa4.38□□□□□ -1.71
SNX13-209ENST00000492626 LRFN2Q9ULH4 789 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms