RNA–Protein interactions for RNA: ENST00000492314.3

PBX3-210, Transcript of PBX homeobox 3, human

Gene PBX3, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PBX3-210	ENST00000492314	RPS12	P25398	132 aa	Known RBP	12.05	□□□□□ -0.48
PBX3-210	ENST00000492314	KIF23	Q02241	960 aa	Predicted RBP	12.05	□□□□□ -0.48
PBX3-210	ENST00000492314	TCIRG1	Q13488	830 aa		12.05	□□□□□ -0.48
PBX3-210	ENST00000492314	RALBP1	Q15311	655 aa		12.05	□□□□□ -0.48
PBX3-210	ENST00000492314	HSP90AB3P	Q58FF7	597 aa		12.05	□□□□□ -0.48
PBX3-210	ENST00000492314	DDX46	Q7L014	1031 aa	Known RBP	12.05	□□□□□ -0.48
PBX3-210	ENST00000492314	KRT26	Q7Z3Y9	468 aa		12.05	□□□□□ -0.48
PBX3-210	ENST00000492314	GBA2	Q9HCG7	927 aa	Predicted RBP	12.05	□□□□□ -0.48
PBX3-210	ENST00000492314	RNF186	Q9NXI6	227 aa		12.05	□□□□□ -0.48
PBX3-210	ENST00000492314	FBXO3	Q9UK99	471 aa		12.05	□□□□□ -0.48
PBX3-210	ENST00000492314	SH3TC1	Q8TE82	1336 aa		12.05	□□□□□ -0.48
PBX3-210	ENST00000492314	RTL9	Q8NET4	1388 aa		12.05	□□□□□ -0.48
PBX3-210	ENST00000492314	COL4A1	P02462	1669 aa		12.04	□□□□□ -0.48
PBX3-210	ENST00000492314	DDX60	Q8IY21	1712 aa	Known RBP	12.04	□□□□□ -0.48
PBX3-210	ENST00000492314	SLC10A3	P09131	477 aa		12.04	□□□□□ -0.48
PBX3-210	ENST00000492314	SF3B3	Q15393	1217 aa	Known RBP	12.04	□□□□□ -0.48
PBX3-210	ENST00000492314	COPS6	Q7L5N1	327 aa		12.04	□□□□□ -0.48
PBX3-210	ENST00000492314	CFAP44	Q96MT7	982 aa		12.04	□□□□□ -0.48
PBX3-210	ENST00000492314	CSRNP1	Q96S65	589 aa		12.04	□□□□□ -0.48
PBX3-210	ENST00000492314	ANXA1	P04083	346 aa		12.03	□□□□□ -0.48
PBX3-210	ENST00000492314	WASHC4	Q2M389	1173 aa		12.03	□□□□□ -0.48
PBX3-210	ENST00000492314	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12.03	□□□□□ -0.48
PBX3-210	ENST00000492314	C2orf69	Q8N8R5	385 aa		12.03	□□□□□ -0.48
PBX3-210	ENST00000492314	XAGE3	Q8WTP9	111 aa		12.03	□□□□□ -0.48
PBX3-210	ENST00000492314	POLL	Q9UGP5	575 aa		12.03	□□□□□ -0.48
PBX3-210	ENST00000492314	TRMT112	Q9UI30	125 aa	Known RBP	12.03	□□□□□ -0.48
PBX3-210	ENST00000492314	MAPK8IP3	Q9UPT6	1336 aa		12.03	□□□□□ -0.48
PBX3-210	ENST00000492314	AKAP11	Q9UKA4	1901 aa		12.03	□□□□□ -0.48
PBX3-210	ENST00000492314	SCN9A	Q15858	1988 aa		12.03	□□□□□ -0.48
PBX3-210	ENST00000492314	ADM5	C9JUS6	153 aa		12.02	□□□□□ -0.49
PBX3-210	ENST00000492314	TRPA1	O75762	1119 aa		12.02	□□□□□ -0.49
PBX3-210	ENST00000492314	NEFM	P07197	916 aa		12.02	□□□□□ -0.49
PBX3-210	ENST00000492314	VIL1	P09327	827 aa	Known RBP	12.02	□□□□□ -0.49
PBX3-210	ENST00000492314	DBNDD1	Q9H9R9	158 aa		12.02	□□□□□ -0.49
PBX3-210	ENST00000492314	KCNQ5	Q9NR82	932 aa		12.02	□□□□□ -0.49
PBX3-210	ENST00000492314	TSPYL4	Q9UJ04	414 aa		12.02	□□□□□ -0.49
PBX3-210	ENST00000492314	EIF2S2	P20042	333 aa	Known RBP	12.01	□□□□□ -0.49
PBX3-210	ENST00000492314	ZNF157	P51786	506 aa	Predicted RBP	12.01	□□□□□ -0.49
PBX3-210	ENST00000492314	SOX10	P56693	466 aa		12.01	□□□□□ -0.49
PBX3-210	ENST00000492314	PRPF38B	Q5VTL8	546 aa	Known RBP	12.01	□□□□□ -0.49
PBX3-210	ENST00000492314	CTU1	Q7Z7A3	348 aa	Known RBP	12.01	□□□□□ -0.49
PBX3-210	ENST00000492314	CELF1	Q92879	486 aa	Known RBP	12.01	□□□□□ -0.49
PBX3-210	ENST00000492314	DCPS	Q96C86	337 aa	Known RBP	12.01	□□□□□ -0.49
PBX3-210	ENST00000492314	ISCA1	Q9BUE6	129 aa		12.01	□□□□□ -0.49
PBX3-210	ENST00000492314	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.01	□□□□□ -0.49
PBX3-210	ENST00000492314	ECE2	O60344	883 aa		12	□□□□□ -0.49
PBX3-210	ENST00000492314	TMPO	P42166	694 aa	Known RBP	12	□□□□□ -0.49
PBX3-210	ENST00000492314	RIPK4	P57078	832 aa		12	□□□□□ -0.49
PBX3-210	ENST00000492314	ZNF280A	P59817	542 aa	Predicted RBP	12	□□□□□ -0.49
PBX3-210	ENST00000492314	GPSM2	P81274	684 aa		12	□□□□□ -0.49
PBX3-210	ENST00000492314	NEUROD2	Q15784	382 aa		12	□□□□□ -0.49
PBX3-210	ENST00000492314	CCDC184	Q52MB2	194 aa		12	□□□□□ -0.49
PBX3-210	ENST00000492314	ZNF579	Q8NAF0	562 aa	Known RBP	12	□□□□□ -0.49
PBX3-210	ENST00000492314	TBC1D16	Q8TBP0	767 aa		12	□□□□□ -0.49
PBX3-210	ENST00000492314	PODXL2	Q9NZ53	605 aa		12	□□□□□ -0.49
PBX3-210	ENST00000492314	NSFL1C	Q9UNZ2	370 aa	Known RBP	12	□□□□□ -0.49
PBX3-210	ENST00000492314	FKBP1B	P68106	108 aa		11.99	□□□□□ -0.49
PBX3-210	ENST00000492314	TRIM28	Q13263	835 aa	Known RBP	11.99	□□□□□ -0.49
PBX3-210	ENST00000492314	KRT24	Q2M2I5	525 aa		11.99	□□□□□ -0.49
PBX3-210	ENST00000492314	KIF4B	Q2VIQ3	1234 aa		11.99	□□□□□ -0.49
PBX3-210	ENST00000492314	NOM1	Q5C9Z4	860 aa	Known RBP	11.99	□□□□□ -0.49
PBX3-210	ENST00000492314	RASAL3	Q86YV0	1011 aa		11.99	□□□□□ -0.49
PBX3-210	ENST00000492314	PLBD2	Q8NHP8	589 aa		11.99	□□□□□ -0.49
PBX3-210	ENST00000492314	CDCA5	Q96FF9	252 aa		11.99	□□□□□ -0.49
PBX3-210	ENST00000492314	GML	Q99445	158 aa		11.99	□□□□□ -0.49
PBX3-210	ENST00000492314	PNN	Q9H307	717 aa	Known RBP	11.99	□□□□□ -0.49
PBX3-210	ENST00000492314	GGA3	Q9NZ52	723 aa		11.99	□□□□□ -0.49
PBX3-210	ENST00000492314	ADAMTS8	Q9UP79	889 aa		11.99	□□□□□ -0.49
PBX3-210	ENST00000492314	ASTN2	O75129	1339 aa	Predicted RBP	11.99	□□□□□ -0.49
PBX3-210	ENST00000492314	PSME4	Q14997	1843 aa		11.98	□□□□□ -0.49
PBX3-210	ENST00000492314	PAPPA2	Q9BXP8	1791 aa		11.98	□□□□□ -0.49
PBX3-210	ENST00000492314	CHL1	O00533	1208 aa		11.98	□□□□□ -0.49
PBX3-210	ENST00000492314	AIMP1	Q12904	312 aa	Known RBP	11.98	□□□□□ -0.49
PBX3-210	ENST00000492314	SULF1	Q8IWU6	871 aa		11.98	□□□□□ -0.49
PBX3-210	ENST00000492314	NECTIN2	Q92692	538 aa		11.98	□□□□□ -0.49
PBX3-210	ENST00000492314	EYA3	Q99504	573 aa		11.98	□□□□□ -0.49
PBX3-210	ENST00000492314	TRIM35	Q9UPQ4	493 aa		11.98	□□□□□ -0.49
PBX3-210	ENST00000492314	PITPNM2	Q9BZ72	1349 aa		11.97	□□□□□ -0.49
PBX3-210	ENST00000492314	C6orf229	H3BNL8	230 aa		11.97	□□□□□ -0.49
PBX3-210	ENST00000492314	RIMBP2	O15034	1052 aa		11.97	□□□□□ -0.49
PBX3-210	ENST00000492314	CLCN6	P51797	869 aa		11.97	□□□□□ -0.49
PBX3-210	ENST00000492314	RPS8	P62241	208 aa	Known RBP	11.97	□□□□□ -0.49
PBX3-210	ENST00000492314	PKN2	Q16513	984 aa	Known RBP	11.97	□□□□□ -0.49
PBX3-210	ENST00000492314	DOK7	Q18PE1	504 aa		11.97	□□□□□ -0.49
PBX3-210	ENST00000492314	RBM26	Q5T8P6	1007 aa	Known RBP	11.97	□□□□□ -0.49
PBX3-210	ENST00000492314	AGBL3	Q8NEM8	1001 aa		11.97	□□□□□ -0.49
PBX3-210	ENST00000492314	FAM89A	Q96GI7	184 aa		11.97	□□□□□ -0.49
PBX3-210	ENST00000492314	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.97	□□□□□ -0.49
PBX3-210	ENST00000492314	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.97	□□□□□ -0.49
PBX3-210	ENST00000492314	HPS5	Q9UPZ3	1129 aa		11.97	□□□□□ -0.49
PBX3-210	ENST00000492314	HOXB7	P09629	217 aa		11.96	□□□□□ -0.49
PBX3-210	ENST00000492314	ANKRD13D	Q6ZTN6	518 aa		11.96	□□□□□ -0.49
PBX3-210	ENST00000492314	CHPF2	Q9P2E5	772 aa		11.96	□□□□□ -0.49
PBX3-210	ENST00000492314	SCARF1	Q14162	830 aa		11.95	□□□□□ -0.5
PBX3-210	ENST00000492314	WDR43	Q15061	677 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
PBX3-210	ENST00000492314	ANGEL2	Q5VTE6	544 aa	Known RBP	11.95	□□□□□ -0.5
PBX3-210	ENST00000492314	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.95	□□□□□ -0.5
PBX3-210	ENST00000492314	RUNDC1	Q96C34	613 aa		11.95	□□□□□ -0.5
PBX3-210	ENST00000492314	CFHR5	Q9BXR6	569 aa		11.95	□□□□□ -0.5
PBX3-210	ENST00000492314	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms