RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 CENPJQ9HC77 1338 aaPredicted RBP6.09□□□□□ -1.43
CLIP4-211ENST00000491701 USP17L5A8MUK1 530 aa6.08□□□□□ -1.44
CLIP4-211ENST00000491701 ARHGEF15O94989 841 aa6.08□□□□□ -1.44
CLIP4-211ENST00000491701 PSME1Q06323 249 aa6.08□□□□□ -1.44
CLIP4-211ENST00000491701 SF3A1Q15459 793 aaKnown RBP6.08□□□□□ -1.44
CLIP4-211ENST00000491701 EML3Q32P44 896 aa6.08□□□□□ -1.44
CLIP4-211ENST00000491701 FAM135BQ49AJ0 1406 aa6.08□□□□□ -1.44
CLIP4-211ENST00000491701 CC2D2BQ6DHV5 1058 aa6.08□□□□□ -1.44
CLIP4-211ENST00000491701 PHTF2Q8N3S3 785 aa6.08□□□□□ -1.44
CLIP4-211ENST00000491701 PRAM1Q96QH2 718 aa6.08□□□□□ -1.44
CLIP4-211ENST00000491701 SLC12A5Q9H2X9 1139 aa6.08□□□□□ -1.44
CLIP4-211ENST00000491701 ZNF395Q9H8N7 513 aaPredicted RBP6.08□□□□□ -1.44
CLIP4-211ENST00000491701 PANK3Q9H999 370 aa6.08□□□□□ -1.44
CLIP4-211ENST00000491701 DNMT3AQ9Y6K1 912 aaPredicted RBP6.08□□□□□ -1.44
CLIP4-211ENST00000491701 SLC35F4A4IF30 521 aa6.08□□□□□ -1.44
CLIP4-211ENST00000491701 ANKRD33BA6NCL7 494 aa6.08□□□□□ -1.44
CLIP4-211ENST00000491701 ATP9BO43861 1147 aa6.08□□□□□ -1.44
CLIP4-211ENST00000491701 SLURP2P0DP57 97 aa6.08□□□□□ -1.44
CLIP4-211ENST00000491701 SSFA2P28290 1259 aa6.08□□□□□ -1.44
CLIP4-211ENST00000491701 ADD1P35611 737 aaKnown RBP6.08□□□□□ -1.44
CLIP4-211ENST00000491701 USP4Q13107 963 aa6.08□□□□□ -1.44
CLIP4-211ENST00000491701 NCOA4Q13772 614 aa6.08□□□□□ -1.44
CLIP4-211ENST00000491701 NAALADL2Q58DX5 795 aa6.08□□□□□ -1.44
CLIP4-211ENST00000491701 PRKRIP1Q9H875 184 aaPredicted RBP6.08□□□□□ -1.44
CLIP4-211ENST00000491701 ZMIZ1Q9ULJ6 1067 aa6.08□□□□□ -1.44
CLIP4-211ENST00000491701 USP17L3A6NCW0 530 aa6.07□□□□□ -1.44
CLIP4-211ENST00000491701 USP17L4A6NCW7 530 aa6.07□□□□□ -1.44
CLIP4-211ENST00000491701 UBAP1LF5GYI3 381 aa6.07□□□□□ -1.44
CLIP4-211ENST00000491701 MEN1O00255 615 aa6.07□□□□□ -1.44
CLIP4-211ENST00000491701 KCNA6P17658 529 aa6.07□□□□□ -1.44
CLIP4-211ENST00000491701 MAP7D1Q3KQU3 841 aa6.07□□□□□ -1.44
CLIP4-211ENST00000491701 USP17L2Q6R6M4 530 aa6.07□□□□□ -1.44
CLIP4-211ENST00000491701 USP17L1Q7RTZ2 530 aa6.07□□□□□ -1.44
CLIP4-211ENST00000491701 ANKLE2Q86XL3 938 aa6.07□□□□□ -1.44
CLIP4-211ENST00000491701 NPAS4Q8IUM7 802 aa6.07□□□□□ -1.44
CLIP4-211ENST00000491701 STK32AQ8WU08 396 aa6.07□□□□□ -1.44
CLIP4-211ENST00000491701 CDK19Q9BWU1 502 aa6.07□□□□□ -1.44
CLIP4-211ENST00000491701 NOD1Q9Y239 953 aa6.07□□□□□ -1.44
CLIP4-211ENST00000491701 NPHP4O75161 1426 aaPredicted RBP6.06□□□□□ -1.44
CLIP4-211ENST00000491701 ANKRD62A6NC57 917 aa6.06□□□□□ -1.44
CLIP4-211ENST00000491701 SPINT1O43278 529 aa6.06□□□□□ -1.44
CLIP4-211ENST00000491701 LILRA1O75019 489 aa6.06□□□□□ -1.44
CLIP4-211ENST00000491701 TMF1P82094 1093 aa6.06□□□□□ -1.44
CLIP4-211ENST00000491701 SAFB2Q14151 953 aaKnown RBP eCLIP6.06□□□□□ -1.44
CLIP4-211ENST00000491701 Q6ZVU0 165 aa6.06□□□□□ -1.44
CLIP4-211ENST00000491701 VWA5B2Q8N398 1253 aa6.06□□□□□ -1.44
CLIP4-211ENST00000491701 RAB6BQ9NRW1 208 aa6.06□□□□□ -1.44
CLIP4-211ENST00000491701 NOVA2Q9UNW9 492 aaKnown RBP6.06□□□□□ -1.44
CLIP4-211ENST00000491701 PIK3R4Q99570 1358 aa6.06□□□□□ -1.44
CLIP4-211ENST00000491701 ADGRB2O60241 1585 aa6.06□□□□□ -1.44
CLIP4-211ENST00000491701 DIP2AQ14689 1571 aa6.06□□□□□ -1.44
CLIP4-211ENST00000491701 NWD1Q149M9 1564 aa6.06□□□□□ -1.44
CLIP4-211ENST00000491701 AKAP12Q02952 1782 aa6.05□□□□□ -1.44
CLIP4-211ENST00000491701 ZNF335Q9H4Z2 1342 aaPredicted RBP6.05□□□□□ -1.44
CLIP4-211ENST00000491701 SSH2Q76I76 1423 aa6.05□□□□□ -1.44
CLIP4-211ENST00000491701 ATP5J2-PTCD1G3V325 749 aa6.05□□□□□ -1.44
CLIP4-211ENST00000491701 WASLO00401 505 aaPredicted RBP6.05□□□□□ -1.44
CLIP4-211ENST00000491701 STAU1O95793 577 aaKnown RBP6.05□□□□□ -1.44
CLIP4-211ENST00000491701 IGHA1P01876 353 aa6.05□□□□□ -1.44
CLIP4-211ENST00000491701 ITGA6P23229 1130 aa6.05□□□□□ -1.44
CLIP4-211ENST00000491701 ERVK-9P63128 1117 aa6.05□□□□□ -1.44
CLIP4-211ENST00000491701 NFATC2IPQ8NCF5 419 aa6.05□□□□□ -1.44
CLIP4-211ENST00000491701 POLMQ9NP87 494 aaPredicted RBP6.05□□□□□ -1.44
CLIP4-211ENST00000491701 MKRN1Q9UHC7 482 aaKnown RBP6.05□□□□□ -1.44
CLIP4-211ENST00000491701 TOPAZ1Q8N9V7 1692 aa6.05□□□□□ -1.44
CLIP4-211ENST00000491701 MARF1Q9Y4F3 1742 aaKnown RBP6.04□□□□□ -1.44
CLIP4-211ENST00000491701 CPSF1Q10570 1443 aaKnown RBP6.04□□□□□ -1.44
CLIP4-211ENST00000491701 PARD3Q8TEW0 1356 aa6.04□□□□□ -1.44
CLIP4-211ENST00000491701 CDC14CA4D256 554 aa6.04□□□□□ -1.44
CLIP4-211ENST00000491701 TOM1O60784 492 aa6.04□□□□□ -1.44
CLIP4-211ENST00000491701 ADH1AP07327 375 aa6.04□□□□□ -1.44
CLIP4-211ENST00000491701 RASA1P20936 1047 aa6.04□□□□□ -1.44
CLIP4-211ENST00000491701 GTF2IP78347 998 aa6.04□□□□□ -1.44
CLIP4-211ENST00000491701 CYP2U1Q7Z449 544 aa6.04□□□□□ -1.44
CLIP4-211ENST00000491701 ZNF594Q96JF6 807 aaPredicted RBP6.04□□□□□ -1.44
CLIP4-211ENST00000491701 ARHGEF10LQ9HCE6 1279 aa6.04□□□□□ -1.44
CLIP4-211ENST00000491701 BIN2Q9UBW5 565 aaPredicted RBP6.04□□□□□ -1.44
CLIP4-211ENST00000491701 RBM19Q9Y4C8 960 aaKnown RBP6.04□□□□□ -1.44
CLIP4-211ENST00000491701 EID1Q9Y6B2 187 aa6.04□□□□□ -1.44
CLIP4-211ENST00000491701 NALCNQ8IZF0 1738 aa6.04□□□□□ -1.44
CLIP4-211ENST00000491701 NPC1L1Q9UHC9 1359 aa6.03□□□□□ -1.44
CLIP4-211ENST00000491701 FMN2Q9NZ56 1722 aa6.03□□□□□ -1.44
CLIP4-211ENST00000491701 CCER2I3L3R5 266 aa6.03□□□□□ -1.44
CLIP4-211ENST00000491701 RECKO95980 971 aa6.03□□□□□ -1.44
CLIP4-211ENST00000491701 SERPINB4P48594 390 aa6.03□□□□□ -1.44
CLIP4-211ENST00000491701 KANK3Q6NY19 840 aa6.03□□□□□ -1.44
CLIP4-211ENST00000491701 GIMAP6Q6P9H5 292 aa6.03□□□□□ -1.44
CLIP4-211ENST00000491701 SV2AQ7L0J3 742 aa6.03□□□□□ -1.44
CLIP4-211ENST00000491701 NUDT16Q96DE0 195 aaKnown RBP6.03□□□□□ -1.44
CLIP4-211ENST00000491701 NLRP3Q96P20 1036 aa6.03□□□□□ -1.44
CLIP4-211ENST00000491701 INSM2Q96T92 566 aaPredicted RBP6.03□□□□□ -1.44
CLIP4-211ENST00000491701 OSBPL3Q9H4L5 887 aa6.03□□□□□ -1.44
CLIP4-211ENST00000491701 PTCH1Q13635 1447 aa6.03□□□□□ -1.44
CLIP4-211ENST00000491701 MED1Q15648 1581 aaPredicted RBP6.03□□□□□ -1.44
CLIP4-211ENST00000491701 NKTRP30414 1462 aaKnown RBP6.02□□□□□ -1.44
CLIP4-211ENST00000491701 ATP7BP35670 1465 aa6.02□□□□□ -1.44
CLIP4-211ENST00000491701 PTGIRP43119 386 aa6.02□□□□□ -1.45
CLIP4-211ENST00000491701 CTSOP43234 321 aaPredicted RBP6.02□□□□□ -1.45
CLIP4-211ENST00000491701 LARP1Q6PKG0 1096 aaKnown RBP6.02□□□□□ -1.45
CLIP4-211ENST00000491701 LYPD4Q6UWN0 246 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms