RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 ZNF496Q96IT1 587 aaPredicted RBP14.62□□□□□ -0.07
SRGAP3-210ENST00000491467 MKI67P46013 3256 aaKnown RBP14.62□□□□□ -0.07
SRGAP3-210ENST00000491467 CNTNAP4Q9C0A0 1308 aa14.62□□□□□ -0.07
SRGAP3-210ENST00000491467 ZNF541Q9H0D2 1346 aa14.62□□□□□ -0.07
SRGAP3-210ENST00000491467 USP42Q9H9J4 1324 aaKnown RBP14.62□□□□□ -0.07
SRGAP3-210ENST00000491467 SMARCA5O60264 1052 aaPredicted RBP14.61□□□□□ -0.07
SRGAP3-210ENST00000491467 TRPA1O75762 1119 aa14.61□□□□□ -0.07
SRGAP3-210ENST00000491467 REC8O95072 547 aa14.61□□□□□ -0.07
SRGAP3-210ENST00000491467 NOGQ13253 232 aa14.61□□□□□ -0.07
SRGAP3-210ENST00000491467 SLC39A6Q13433 755 aa14.61□□□□□ -0.07
SRGAP3-210ENST00000491467 RIC3Q7Z5B4 369 aa14.61□□□□□ -0.07
SRGAP3-210ENST00000491467 ATG3Q9NT62 314 aa14.61□□□□□ -0.07
SRGAP3-210ENST00000491467 EXOC6BQ9Y2D4 811 aa14.61□□□□□ -0.07
SRGAP3-210ENST00000491467 NRXN2Q9P2S2 1712 aa14.61□□□□□ -0.07
SRGAP3-210ENST00000491467 COL15A1P39059 1388 aa14.6□□□□□ -0.07
SRGAP3-210ENST00000491467 SRGAP3O43295 1099 aa14.6□□□□□ -0.07
SRGAP3-210ENST00000491467 NBPF7P0C2Y1 421 aaPredicted RBP14.6□□□□□ -0.07
SRGAP3-210ENST00000491467 SDSP20132 328 aa14.6□□□□□ -0.07
SRGAP3-210ENST00000491467 MX1P20591 662 aa14.6□□□□□ -0.07
SRGAP3-210ENST00000491467 PKN2Q16513 984 aaKnown RBP14.6□□□□□ -0.07
SRGAP3-210ENST00000491467 HHIPL1Q96JK4 782 aa14.6□□□□□ -0.07
SRGAP3-210ENST00000491467 METTL22Q9BUU2 404 aaPredicted RBP14.6□□□□□ -0.07
SRGAP3-210ENST00000491467 TBC1D2Q9BYX2 928 aa14.6□□□□□ -0.07
SRGAP3-210ENST00000491467 SAGE1Q9NXZ1 904 aa14.6□□□□□ -0.07
SRGAP3-210ENST00000491467 ZNF831Q5JPB2 1677 aa14.6□□□□□ -0.07
SRGAP3-210ENST00000491467 TRIOBPQ9H2D6 2365 aa14.59□□□□□ -0.07
SRGAP3-210ENST00000491467 GRM8O00222 908 aa14.59□□□□□ -0.07
SRGAP3-210ENST00000491467 SURF6O75683 361 aaKnown RBP14.59□□□□□ -0.07
SRGAP3-210ENST00000491467 CELF2O95319 508 aaKnown RBP14.59□□□□□ -0.07
SRGAP3-210ENST00000491467 SLC4A3P48751 1232 aa14.59□□□□□ -0.07
SRGAP3-210ENST00000491467 PROSER3Q2NL68 480 aa14.59□□□□□ -0.07
SRGAP3-210ENST00000491467 ANKRD13DQ6ZTN6 518 aa14.59□□□□□ -0.07
SRGAP3-210ENST00000491467 HSCBQ8IWL3 235 aa14.59□□□□□ -0.07
SRGAP3-210ENST00000491467 TEX13AQ9BXU3 409 aaPredicted RBP14.59□□□□□ -0.07
SRGAP3-210ENST00000491467 SLX4Q8IY92 1834 aa14.59□□□□□ -0.07
SRGAP3-210ENST00000491467 APBB1O00213 710 aa14.58□□□□□ -0.08
SRGAP3-210ENST00000491467 ANXA1P04083 346 aa14.58□□□□□ -0.08
SRGAP3-210ENST00000491467 RHPN1Q8TCX5 695 aa14.58□□□□□ -0.08
SRGAP3-210ENST00000491467 PRAMEF22A3QJZ6 481 aa14.57□□□□□ -0.08
SRGAP3-210ENST00000491467 ERC2O15083 957 aa14.57□□□□□ -0.08
SRGAP3-210ENST00000491467 ZPR1O75312 459 aa14.57□□□□□ -0.08
SRGAP3-210ENST00000491467 SERPINB2P05120 415 aa14.57□□□□□ -0.08
SRGAP3-210ENST00000491467 COPS6Q7L5N1 327 aa14.57□□□□□ -0.08
SRGAP3-210ENST00000491467 SYNE4Q8N205 404 aa14.57□□□□□ -0.08
SRGAP3-210ENST00000491467 PLBD2Q8NHP8 589 aa14.57□□□□□ -0.08
SRGAP3-210ENST00000491467 SLC4A9Q96Q91 983 aa14.57□□□□□ -0.08
SRGAP3-210ENST00000491467 USP26Q9BXU7 913 aa14.57□□□□□ -0.08
SRGAP3-210ENST00000491467 RNF186Q9NXI6 227 aa14.57□□□□□ -0.08
SRGAP3-210ENST00000491467 HDAC9Q9UKV0 1011 aa14.57□□□□□ -0.08
SRGAP3-210ENST00000491467 USP16Q9Y5T5 823 aa14.57□□□□□ -0.08
SRGAP3-210ENST00000491467 TTC41PQ6P2S7 1318 aa14.57□□□□□ -0.08
SRGAP3-210ENST00000491467 ANKRD31Q8N7Z5 1873 aa14.57□□□□□ -0.08
SRGAP3-210ENST00000491467 LRP10Q7Z4F1 713 aa14.56□□□□□ -0.08
SRGAP3-210ENST00000491467 OTUD7AQ8TE49 926 aaPredicted RBP14.56□□□□□ -0.08
SRGAP3-210ENST00000491467 XAGE3Q8WTP9 111 aa14.56□□□□□ -0.08
SRGAP3-210ENST00000491467 COL25A1Q9BXS0 654 aaPredicted RBP14.56□□□□□ -0.08
SRGAP3-210ENST00000491467 ZNF408Q9H9D4 720 aa14.56□□□□□ -0.08
SRGAP3-210ENST00000491467 PAPPA2Q9BXP8 1791 aa14.55□□□□□ -0.08
SRGAP3-210ENST00000491467 NEURL1BA8MQ27 555 aa14.55□□□□□ -0.08
SRGAP3-210ENST00000491467 LMOD1P29536 600 aaPredicted RBP14.55□□□□□ -0.08
SRGAP3-210ENST00000491467 AIMP1Q12904 312 aaKnown RBP14.55□□□□□ -0.08
SRGAP3-210ENST00000491467 GCKRQ14397 625 aa14.55□□□□□ -0.08
SRGAP3-210ENST00000491467 NBR1Q14596 966 aa14.55□□□□□ -0.08
SRGAP3-210ENST00000491467 RABEP1Q15276 862 aa14.55□□□□□ -0.08
SRGAP3-210ENST00000491467 USPL1Q5W0Q7 1092 aa14.55□□□□□ -0.08
SRGAP3-210ENST00000491467 VSIG10Q8N0Z9 540 aa14.55□□□□□ -0.08
SRGAP3-210ENST00000491467 CLASRPQ8N2M8 674 aaKnown RBP14.54□□□□□ -0.08
SRGAP3-210ENST00000491467 GPATCH3Q96I76 525 aa14.54□□□□□ -0.08
SRGAP3-210ENST00000491467 ANTXR1Q9H6X2 564 aa14.54□□□□□ -0.08
SRGAP3-210ENST00000491467 COL11A2P13942 1736 aaPredicted RBP14.54□□□□□ -0.08
SRGAP3-210ENST00000491467 CARMIL3Q8ND23 1372 aa14.53□□□□□ -0.08
SRGAP3-210ENST00000491467 IGKV5-2P06315 115 aa14.53□□□□□ -0.08
SRGAP3-210ENST00000491467 MYL6BP14649 208 aa14.53□□□□□ -0.08
SRGAP3-210ENST00000491467 NFIXQ14938 502 aa14.53□□□□□ -0.08
SRGAP3-210ENST00000491467 NFKBIBQ15653 356 aa14.53□□□□□ -0.08
SRGAP3-210ENST00000491467 CWF19L2Q2TBE0 894 aaKnown RBP14.53□□□□□ -0.08
SRGAP3-210ENST00000491467 GPC2Q8N158 579 aa14.53□□□□□ -0.08
SRGAP3-210ENST00000491467 KIF2CQ99661 725 aa14.53□□□□□ -0.08
SRGAP3-210ENST00000491467 CHMP5Q9NZZ3 219 aa14.53□□□□□ -0.08
SRGAP3-210ENST00000491467 CIZ1Q9ULV3 898 aaPredicted RBP14.53□□□□□ -0.08
SRGAP3-210ENST00000491467 GLRX3O76003 335 aaKnown RBP14.52□□□□□ -0.09
SRGAP3-210ENST00000491467 MCCP23508 829 aa14.52□□□□□ -0.09
SRGAP3-210ENST00000491467 CRKLP46109 303 aaKnown RBP14.52□□□□□ -0.09
SRGAP3-210ENST00000491467 KIF23Q02241 960 aaPredicted RBP14.52□□□□□ -0.09
SRGAP3-210ENST00000491467 G3BP1Q13283 466 aaKnown RBP eCLIP14.52□□□□□ -0.09
SRGAP3-210ENST00000491467 OS9Q13438 667 aaPredicted RBP14.52□□□□□ -0.09
SRGAP3-210ENST00000491467 SOGA3Q5TF21 947 aa14.52□□□□□ -0.09
SRGAP3-210ENST00000491467 MYD88Q99836 296 aa14.52□□□□□ -0.09
SRGAP3-210ENST00000491467 GJA3Q9Y6H8 435 aa14.52□□□□□ -0.09
SRGAP3-210ENST00000491467 ANAPC15P60006 121 aa14.51□□□□□ -0.09
SRGAP3-210ENST00000491467 SUCLG2Q96I99 432 aa14.51□□□□□ -0.09
SRGAP3-210ENST00000491467 POTEFA5A3E0 1075 aa14.5□□□□□ -0.09
SRGAP3-210ENST00000491467 TRIM6-TRIM34B2RNG4 842 aa14.5□□□□□ -0.09
SRGAP3-210ENST00000491467 CHMLP26374 656 aa14.5□□□□□ -0.09
SRGAP3-210ENST00000491467 FBXO46Q6PJ61 603 aaPredicted RBP14.5□□□□□ -0.09
SRGAP3-210ENST00000491467 IL17RAQ96F46 866 aa14.5□□□□□ -0.09
SRGAP3-210ENST00000491467 OTUD5Q96G74 571 aa14.5□□□□□ -0.09
SRGAP3-210ENST00000491467 ESYT1Q9BSJ8 1104 aa14.5□□□□□ -0.09
SRGAP3-210ENST00000491467 ZNF277Q9NRM2 450 aaPredicted RBP14.5□□□□□ -0.09
SRGAP3-210ENST00000491467 ANKRD36CQ5JPF3 1778 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms