RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 NPM2Q86SE8 214 aaKnown RBP9.62□□□□□ -0.87
PRPF4B-208ENST00000490653 RUNDC1Q96C34 613 aa9.62□□□□□ -0.87
PRPF4B-208ENST00000490653 LAS1LQ9Y4W2 734 aaKnown RBP9.62□□□□□ -0.87
PRPF4B-208ENST00000490653 ARIH1Q9Y4X5 557 aaPredicted RBP9.62□□□□□ -0.87
PRPF4B-208ENST00000490653 KDM3BQ7LBC6 1761 aa9.62□□□□□ -0.87
PRPF4B-208ENST00000490653 SMAPO00193 183 aa9.61□□□□□ -0.87
PRPF4B-208ENST00000490653 VEGFAP15692 232 aaPredicted RBP9.61□□□□□ -0.87
PRPF4B-208ENST00000490653 LMNB1P20700 586 aa9.61□□□□□ -0.87
PRPF4B-208ENST00000490653 GPTP24298 496 aa9.61□□□□□ -0.87
PRPF4B-208ENST00000490653 OLFM4Q6UX06 510 aa9.61□□□□□ -0.87
PRPF4B-208ENST00000490653 CLEC4GQ6UXB4 293 aa9.61□□□□□ -0.87
PRPF4B-208ENST00000490653 SLC51AQ86UW1 340 aa9.61□□□□□ -0.87
PRPF4B-208ENST00000490653 NUTM1Q86Y26 1132 aa9.61□□□□□ -0.87
PRPF4B-208ENST00000490653 C16orf71Q8IYS4 520 aaPredicted RBP9.61□□□□□ -0.87
PRPF4B-208ENST00000490653 CNBD1Q8NA66 436 aa9.61□□□□□ -0.87
PRPF4B-208ENST00000490653 ZNF428Q96B54 188 aa9.61□□□□□ -0.87
PRPF4B-208ENST00000490653 ZBTB3Q9H5J0 574 aa9.61□□□□□ -0.87
PRPF4B-208ENST00000490653 SCN7AQ01118 1682 aa9.61□□□□□ -0.87
PRPF4B-208ENST00000490653 DLEC1Q9Y238 1755 aa9.6□□□□□ -0.87
PRPF4B-208ENST00000490653 ZC3H4Q9UPT8 1303 aaKnown RBP9.6□□□□□ -0.87
PRPF4B-208ENST00000490653 CCDC88AQ3V6T2 1871 aa9.6□□□□□ -0.87
PRPF4B-208ENST00000490653 COL11A2P13942 1736 aaPredicted RBP9.6□□□□□ -0.87
PRPF4B-208ENST00000490653 CHL1O00533 1208 aa9.6□□□□□ -0.87
PRPF4B-208ENST00000490653 SRGNP10124 158 aa9.6□□□□□ -0.87
PRPF4B-208ENST00000490653 PDE6BP35913 854 aa9.6□□□□□ -0.87
PRPF4B-208ENST00000490653 WDR43Q15061 677 aaKnown RBP eCLIP9.6□□□□□ -0.87
PRPF4B-208ENST00000490653 SUSD4Q5VX71 490 aa9.6□□□□□ -0.87
PRPF4B-208ENST00000490653 NBPF5PQ86XG9 351 aaPredicted RBP9.6□□□□□ -0.87
PRPF4B-208ENST00000490653 SLX4Q8IY92 1834 aa9.6□□□□□ -0.87
PRPF4B-208ENST00000490653 BCORQ6W2J9 1755 aa9.6□□□□□ -0.87
PRPF4B-208ENST00000490653 MAP3K15Q6ZN16 1313 aa9.59□□□□□ -0.87
PRPF4B-208ENST00000490653 C3orf80F5H4A9 247 aa9.59□□□□□ -0.87
PRPF4B-208ENST00000490653 APAF1O14727 1248 aa9.59□□□□□ -0.87
PRPF4B-208ENST00000490653 NPHP1O15259 732 aa9.59□□□□□ -0.87
PRPF4B-208ENST00000490653 ST5P78524 1137 aa9.59□□□□□ -0.87
PRPF4B-208ENST00000490653 ERFEQ4G0M1 354 aa9.59□□□□□ -0.87
PRPF4B-208ENST00000490653 C7orf43Q8WVR3 580 aa9.59□□□□□ -0.87
PRPF4B-208ENST00000490653 TATDN2Q93075 761 aa9.59□□□□□ -0.87
PRPF4B-208ENST00000490653 TIAM2Q8IVF5 1701 aa9.59□□□□□ -0.87
PRPF4B-208ENST00000490653 UBN2Q6ZU65 1347 aa9.58□□□□□ -0.88
PRPF4B-208ENST00000490653 KLRG2A4D1S0 409 aaPredicted RBP9.58□□□□□ -0.88
PRPF4B-208ENST00000490653 ERVV-1B6SEH8 477 aa9.58□□□□□ -0.88
PRPF4B-208ENST00000490653 FOXN1O15353 648 aa9.58□□□□□ -0.88
PRPF4B-208ENST00000490653 DDNO94850 711 aaPredicted RBP9.58□□□□□ -0.88
PRPF4B-208ENST00000490653 AIMP1Q12904 312 aaKnown RBP9.58□□□□□ -0.88
PRPF4B-208ENST00000490653 E2F4Q16254 413 aa9.58□□□□□ -0.88
PRPF4B-208ENST00000490653 STYK1Q6J9G0 422 aa9.58□□□□□ -0.88
PRPF4B-208ENST00000490653 TPTE2Q6XPS3 522 aa9.58□□□□□ -0.88
PRPF4B-208ENST00000490653 ZNF34Q8IZ26 560 aa9.58□□□□□ -0.88
PRPF4B-208ENST00000490653 SYNE4Q8N205 404 aa9.58□□□□□ -0.88
PRPF4B-208ENST00000490653 MASTLQ96GX5 879 aa9.58□□□□□ -0.88
PRPF4B-208ENST00000490653 MKRN1Q9UHC7 482 aaKnown RBP9.58□□□□□ -0.88
PRPF4B-208ENST00000490653 NUP98P52948 1817 aa9.58□□□□□ -0.88
PRPF4B-208ENST00000490653 PASKQ96RG2 1323 aa9.57□□□□□ -0.88
PRPF4B-208ENST00000490653 LCE2BO14633 110 aa9.57□□□□□ -0.88
PRPF4B-208ENST00000490653 PRPF40BQ6NWY9 871 aaKnown RBP9.57□□□□□ -0.88
PRPF4B-208ENST00000490653 COPS6Q7L5N1 327 aa9.57□□□□□ -0.88
PRPF4B-208ENST00000490653 XAGE3Q8WTP9 111 aa9.57□□□□□ -0.88
PRPF4B-208ENST00000490653 MTRQ99707 1265 aa9.57□□□□□ -0.88
PRPF4B-208ENST00000490653 IL21Q9HBE4 155 aa9.57□□□□□ -0.88
PRPF4B-208ENST00000490653 PNMA3Q9UL41 463 aa9.57□□□□□ -0.88
PRPF4B-208ENST00000490653 ZNF652Q9Y2D9 606 aa9.57□□□□□ -0.88
PRPF4B-208ENST00000490653 ABCC12Q96J65 1359 aa9.57□□□□□ -0.88
PRPF4B-208ENST00000490653 CACNA1SQ13698 1873 aa9.57□□□□□ -0.88
PRPF4B-208ENST00000490653 SNED1Q8TER0 1413 aa9.56□□□□□ -0.88
PRPF4B-208ENST00000490653 LAMB4A4D0S4 1761 aa9.56□□□□□ -0.88
PRPF4B-208ENST00000490653 ELL2O00472 640 aaPredicted RBP9.56□□□□□ -0.88
PRPF4B-208ENST00000490653 GTF2E1P29083 439 aaPredicted RBP9.56□□□□□ -0.88
PRPF4B-208ENST00000490653 LMOD3Q0VAK6 560 aa9.56□□□□□ -0.88
PRPF4B-208ENST00000490653 GIGYF2Q6Y7W6 1299 aaKnown RBP9.56□□□□□ -0.88
PRPF4B-208ENST00000490653 KIF6Q6ZMV9 814 aa9.56□□□□□ -0.88
PRPF4B-208ENST00000490653 CNKSR1Q969H4 720 aa9.56□□□□□ -0.88
PRPF4B-208ENST00000490653 MBIPQ9NS73 344 aa9.56□□□□□ -0.88
PRPF4B-208ENST00000490653 BABAM1Q9NWV8 329 aa9.56□□□□□ -0.88
PRPF4B-208ENST00000490653 RBM27Q9P2N5 1060 aaKnown RBP9.56□□□□□ -0.88
PRPF4B-208ENST00000490653 COL4A5P29400 1685 aa9.55□□□□□ -0.88
PRPF4B-208ENST00000490653 CNTNAP1P78357 1384 aa9.55□□□□□ -0.88
PRPF4B-208ENST00000490653 GRXCR2A6NFK2 248 aa9.55□□□□□ -0.88
PRPF4B-208ENST00000490653 TCERG1O14776 1098 aaKnown RBP9.55□□□□□ -0.88
PRPF4B-208ENST00000490653 GFRA3O60609 400 aa9.55□□□□□ -0.88
PRPF4B-208ENST00000490653 NTSR2O95665 410 aa9.55□□□□□ -0.88
PRPF4B-208ENST00000490653 ZNF853P0CG23 659 aa9.55□□□□□ -0.88
PRPF4B-208ENST00000490653 NPR1P16066 1061 aa9.55□□□□□ -0.88
PRPF4B-208ENST00000490653 DUSP27Q5VZP5 1158 aa9.55□□□□□ -0.88
PRPF4B-208ENST00000490653 PRKD2Q9BZL6 878 aa9.55□□□□□ -0.88
PRPF4B-208ENST00000490653 CHPF2Q9P2E5 772 aa9.55□□□□□ -0.88
PRPF4B-208ENST00000490653 PDZRN3Q9UPQ7 1066 aa9.55□□□□□ -0.88
PRPF4B-208ENST00000490653 ZNF541Q9H0D2 1346 aa9.55□□□□□ -0.88
PRPF4B-208ENST00000490653 LTBP3Q9NS15 1303 aa9.55□□□□□ -0.88
PRPF4B-208ENST00000490653 FER1L6Q2WGJ9 1857 aa9.54□□□□□ -0.88
PRPF4B-208ENST00000490653 OSBPP22059 807 aa9.54□□□□□ -0.88
PRPF4B-208ENST00000490653 ZEB1P37275 1124 aaPredicted RBP9.54□□□□□ -0.88
PRPF4B-208ENST00000490653 FMR1Q06787 632 aaKnown RBP eCLIP9.54□□□□□ -0.88
PRPF4B-208ENST00000490653 C8orf58Q8NAV2 365 aa9.54□□□□□ -0.88
PRPF4B-208ENST00000490653 SPRYD3Q8NCJ5 442 aa9.54□□□□□ -0.88
PRPF4B-208ENST00000490653 CFAP44Q96MT7 982 aa9.54□□□□□ -0.88
PRPF4B-208ENST00000490653 CDHR5Q9HBB8 845 aa9.54□□□□□ -0.88
PRPF4B-208ENST00000490653 DDX21Q9NR30 783 aaKnown RBP eCLIP9.54□□□□□ -0.88
PRPF4B-208ENST00000490653 ZNF277Q9NRM2 450 aaPredicted RBP9.54□□□□□ -0.88
PRPF4B-208ENST00000490653 ADAMTSL1Q8N6G6 1762 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms