RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 FAM208AQ9UK61 1670 aaKnown RBP5.82□□□□□ -1.48
RTN1-207ENST00000490111 MOXD2PA6NHM9 499 aa5.82□□□□□ -1.48
RTN1-207ENST00000490111 CENPBP07199 599 aaPredicted RBP5.82□□□□□ -1.48
RTN1-207ENST00000490111 ATP2B1P20020 1258 aa5.82□□□□□ -1.48
RTN1-207ENST00000490111 ATP2B4P23634 1241 aa5.82□□□□□ -1.48
RTN1-207ENST00000490111 ATP6V1AP38606 617 aa5.82□□□□□ -1.48
RTN1-207ENST00000490111 ANAPC15P60006 121 aa5.82□□□□□ -1.48
RTN1-207ENST00000490111 SEMA3FQ13275 785 aa5.82□□□□□ -1.48
RTN1-207ENST00000490111 APBB1IPQ7Z5R6 666 aaPredicted RBP5.82□□□□□ -1.48
RTN1-207ENST00000490111 TTLL6Q8N841 843 aa5.82□□□□□ -1.48
RTN1-207ENST00000490111 PIGBQ92521 554 aa5.82□□□□□ -1.48
RTN1-207ENST00000490111 KIF12Q96FN5 646 aa5.82□□□□□ -1.48
RTN1-207ENST00000490111 DDX21Q9NR30 783 aaKnown RBP eCLIP5.82□□□□□ -1.48
RTN1-207ENST00000490111 CHPF2Q9P2E5 772 aa5.82□□□□□ -1.48
RTN1-207ENST00000490111 EGFL7Q9UHF1 273 aa5.82□□□□□ -1.48
RTN1-207ENST00000490111 IQSEC3Q9UPP2 1182 aaPredicted RBP5.82□□□□□ -1.48
RTN1-207ENST00000490111 PCDHB15Q9Y5E8 787 aa5.82□□□□□ -1.48
RTN1-207ENST00000490111 MAP2P11137 1827 aaKnown RBP5.82□□□□□ -1.48
RTN1-207ENST00000490111 ADAMTSL1Q8N6G6 1762 aa5.82□□□□□ -1.48
RTN1-207ENST00000490111 DICER1Q9UPY3 1922 aaKnown RBP5.82□□□□□ -1.48
RTN1-207ENST00000490111 MEGF6O75095 1541 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 A0A0U1RQG5 324 aaPredicted RBP5.81□□□□□ -1.48
RTN1-207ENST00000490111 FAM196BA6NMK8 535 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 PPP1R3GB7ZBB8 358 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 USP17L15C9J2P7 530 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 USP17L10C9JJH3 530 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 USP17L13C9JLJ4 530 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 USP17L12C9JPN9 530 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 USP17L11C9JVI0 530 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 USP17L21D6R901 530 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 USP17L18D6R9N7 530 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 USP17L22D6RA61 530 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 USP17L17D6RBQ6 530 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 USP17L19D6RCP7 530 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 USP17L20D6RJB6 530 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 EIF3JO75822 258 aaKnown RBP5.81□□□□□ -1.48
RTN1-207ENST00000490111 IBSPP21815 317 aaPredicted RBP5.81□□□□□ -1.48
RTN1-207ENST00000490111 EPHX2P34913 555 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 GTF2F1P35269 517 aaKnown RBP eCLIP5.81□□□□□ -1.48
RTN1-207ENST00000490111 SCNN1AP37088 669 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 DDR1Q08345 913 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 USP17L24Q0WX57 530 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 HSP90AB2PQ58FF8 381 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 PNMA8AQ86V59 439 aaPredicted RBP5.81□□□□□ -1.48
RTN1-207ENST00000490111 NT5DC4Q86YG4 428 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 IP6K1Q92551 441 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 SGSM3Q96HU1 749 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 SIN3AQ96ST3 1273 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 HACL1Q9UJ83 578 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 ADGRG1Q9Y653 693 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 ITGB4P16144 1822 aa5.81□□□□□ -1.48
RTN1-207ENST00000490111 USP31Q70CQ4 1352 aa5.8□□□□□ -1.48
RTN1-207ENST00000490111 CGNL1Q0VF96 1302 aa5.8□□□□□ -1.48
RTN1-207ENST00000490111 CENPJQ9HC77 1338 aaPredicted RBP5.8□□□□□ -1.48
RTN1-207ENST00000490111 FGD1P98174 961 aa5.8□□□□□ -1.48
RTN1-207ENST00000490111 GOLGA2Q08379 1002 aa5.8□□□□□ -1.48
RTN1-207ENST00000490111 RALBP1Q15311 655 aa5.8□□□□□ -1.48
RTN1-207ENST00000490111 CIAPIN1Q6FI81 312 aa5.8□□□□□ -1.48
RTN1-207ENST00000490111 ZNF746Q6NUN9 644 aaPredicted RBP5.8□□□□□ -1.48
RTN1-207ENST00000490111 JAZF1Q86VZ6 243 aa5.8□□□□□ -1.48
RTN1-207ENST00000490111 C1orf216Q8TAB5 229 aa5.8□□□□□ -1.48
RTN1-207ENST00000490111 GMLQ99445 158 aa5.8□□□□□ -1.48
RTN1-207ENST00000490111 TGIF2Q9GZN2 237 aa5.8□□□□□ -1.48
RTN1-207ENST00000490111 UBA5Q9GZZ9 404 aa5.8□□□□□ -1.48
RTN1-207ENST00000490111 HPS5Q9UPZ3 1129 aa5.8□□□□□ -1.48
RTN1-207ENST00000490111 TLL2Q9Y6L7 1015 aa5.8□□□□□ -1.48
RTN1-207ENST00000490111 PCDH11XQ9BZA7 1347 aa5.79□□□□□ -1.48
RTN1-207ENST00000490111 PCDH11YQ9BZA8 1340 aa5.79□□□□□ -1.48
RTN1-207ENST00000490111 USP17L3A6NCW0 530 aa5.79□□□□□ -1.48
RTN1-207ENST00000490111 USP17L4A6NCW7 530 aa5.79□□□□□ -1.48
RTN1-207ENST00000490111 POLRMTO00411 1230 aaKnown RBP5.79□□□□□ -1.48
RTN1-207ENST00000490111 PPFIA4O75335 1185 aa5.79□□□□□ -1.48
RTN1-207ENST00000490111 RPS6KA4O75676 772 aa5.79□□□□□ -1.48
RTN1-207ENST00000490111 CD46P15529 392 aa5.79□□□□□ -1.48
RTN1-207ENST00000490111 NDUFV2P19404 249 aa5.79□□□□□ -1.48
RTN1-207ENST00000490111 MAPK1P28482 360 aa5.79□□□□□ -1.48
RTN1-207ENST00000490111 TM4SF1P30408 202 aa5.79□□□□□ -1.48
RTN1-207ENST00000490111 RBL2Q08999 1139 aa5.79□□□□□ -1.48
RTN1-207ENST00000490111 CRTC2Q53ET0 693 aaPredicted RBP5.79□□□□□ -1.48
RTN1-207ENST00000490111 RC3H1Q5TC82 1133 aaKnown RBP5.79□□□□□ -1.48
RTN1-207ENST00000490111 CST9Q5W186 159 aa5.79□□□□□ -1.48
RTN1-207ENST00000490111 USP17L2Q6R6M4 530 aa5.79□□□□□ -1.48
RTN1-207ENST00000490111 USP17L1Q7RTZ2 530 aa5.79□□□□□ -1.48
RTN1-207ENST00000490111 PLEKHM2Q8IWE5 1019 aa5.79□□□□□ -1.48
RTN1-207ENST00000490111 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.79□□□□□ -1.48
RTN1-207ENST00000490111 PMM1Q92871 262 aa5.79□□□□□ -1.48
RTN1-207ENST00000490111 EVI5LQ96CN4 794 aa5.79□□□□□ -1.48
RTN1-207ENST00000490111 STAC3Q96MF2 364 aa5.79□□□□□ -1.48
RTN1-207ENST00000490111 PLCD4Q9BRC7 762 aa5.79□□□□□ -1.48
RTN1-207ENST00000490111 ZSWIM4Q9H7M6 989 aa5.79□□□□□ -1.48
RTN1-207ENST00000490111 TERF2IPQ9NYB0 399 aa5.79□□□□□ -1.48
RTN1-207ENST00000490111 COLQQ9Y215 455 aaPredicted RBP5.79□□□□□ -1.48
RTN1-207ENST00000490111 DLEC1Q9Y238 1755 aa5.79□□□□□ -1.48
RTN1-207ENST00000490111 KTN1Q86UP2 1357 aaKnown RBP5.79□□□□□ -1.48
RTN1-207ENST00000490111 LTBP3Q9NS15 1303 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 CD163L1Q9NR16 1453 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 C2orf72A6NCS6 295 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 H3BRB1 525 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 PIK3CDO00329 1044 aa5.78□□□□□ -1.48
RTN1-207ENST00000490111 U2SURPO15042 1029 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms