RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 KNSTRNQ9Y448 316 aa19.58■□□□□ 0.72
SDHAF3-204ENST00000489852 ZNF609O15014 1411 aa19.58■□□□□ 0.72
SDHAF3-204ENST00000489852 C6orf229H3BNL8 230 aa19.57■□□□□ 0.72
SDHAF3-204ENST00000489852 INHBEP58166 350 aa19.57■□□□□ 0.72
SDHAF3-204ENST00000489852 IFNL1Q8IU54 200 aa19.57■□□□□ 0.72
SDHAF3-204ENST00000489852 U2SURPO15042 1029 aaKnown RBP19.56■□□□□ 0.72
SDHAF3-204ENST00000489852 NF2P35240 595 aa19.56■□□□□ 0.72
SDHAF3-204ENST00000489852 PTPN12Q05209 780 aaKnown RBP19.56■□□□□ 0.72
SDHAF3-204ENST00000489852 SPRYD7Q5W111 196 aa19.56■□□□□ 0.72
SDHAF3-204ENST00000489852 GIGYF2Q6Y7W6 1299 aaKnown RBP19.56■□□□□ 0.72
SDHAF3-204ENST00000489852 ANKRD36CQ5JPF3 1778 aa19.55■□□□□ 0.72
SDHAF3-204ENST00000489852 MANSC4A6NHS7 340 aaPredicted RBP19.55■□□□□ 0.72
SDHAF3-204ENST00000489852 MYL6BP14649 208 aa19.55■□□□□ 0.72
SDHAF3-204ENST00000489852 SLC9C1Q4G0N8 1177 aa19.55■□□□□ 0.72
SDHAF3-204ENST00000489852 DDX60Q8IY21 1712 aaKnown RBP19.55■□□□□ 0.72
SDHAF3-204ENST00000489852 COL25A1Q9BXS0 654 aaPredicted RBP19.55■□□□□ 0.72
SDHAF3-204ENST00000489852 PRO3102Q9H379 93 aa19.55■□□□□ 0.72
SDHAF3-204ENST00000489852 POLLQ9UGP5 575 aa19.55■□□□□ 0.72
SDHAF3-204ENST00000489852 LAMB4A4D0S4 1761 aa19.55■□□□□ 0.72
SDHAF3-204ENST00000489852 LAMB2P55268 1798 aa19.55■□□□□ 0.72
SDHAF3-204ENST00000489852 HCLS1P14317 486 aaPredicted RBP19.54■□□□□ 0.72
SDHAF3-204ENST00000489852 EYA3Q99504 573 aa19.54■□□□□ 0.72
SDHAF3-204ENST00000489852 MYOZ2Q9NPC6 264 aa19.54■□□□□ 0.72
SDHAF3-204ENST00000489852 MYCP01106 439 aaPredicted RBP19.53■□□□□ 0.72
SDHAF3-204ENST00000489852 MCM10Q7L590 875 aa19.53■□□□□ 0.72
SDHAF3-204ENST00000489852 ARMC9Q7Z3E5 817 aa19.53■□□□□ 0.72
SDHAF3-204ENST00000489852 AGBL3Q8NEM8 1001 aa19.53■□□□□ 0.72
SDHAF3-204ENST00000489852 RTF1Q92541 710 aaKnown RBP19.53■□□□□ 0.72
SDHAF3-204ENST00000489852 NECTIN2Q92692 538 aa19.53■□□□□ 0.72
SDHAF3-204ENST00000489852 PHACTR3Q96KR7 559 aa19.53■□□□□ 0.72
SDHAF3-204ENST00000489852 TAF1P21675 1872 aa19.53■□□□□ 0.72
SDHAF3-204ENST00000489852 LRRC37AA6NMS7 1700 aa19.53■□□□□ 0.72
SDHAF3-204ENST00000489852 SOX1O00570 391 aaPredicted RBP19.52■□□□□ 0.72
SDHAF3-204ENST00000489852 SP3Q02447 781 aa19.52■□□□□ 0.72
SDHAF3-204ENST00000489852 LRCH3Q96II8 777 aa19.52■□□□□ 0.72
SDHAF3-204ENST00000489852 SCN9AQ15858 1988 aa19.52■□□□□ 0.71
SDHAF3-204ENST00000489852 WTIPA6NIX2 430 aaPredicted RBP19.51■□□□□ 0.71
SDHAF3-204ENST00000489852 G3V3G9 751 aa19.51■□□□□ 0.71
SDHAF3-204ENST00000489852 IGF2BP3O00425 579 aaKnown RBP eCLIP19.51■□□□□ 0.71
SDHAF3-204ENST00000489852 USP17L8P0C7I0 530 aa19.51■□□□□ 0.71
SDHAF3-204ENST00000489852 PRKG1Q13976 671 aa19.51■□□□□ 0.71
SDHAF3-204ENST00000489852 DCAF8Q5TAQ9 597 aa19.51■□□□□ 0.71
SDHAF3-204ENST00000489852 RSBN1LQ6PCB5 846 aaPredicted RBP19.51■□□□□ 0.71
SDHAF3-204ENST00000489852 UNC80Q8N2C7 3258 aa19.51■□□□□ 0.71
SDHAF3-204ENST00000489852 GPSM2P81274 684 aa19.5■□□□□ 0.71
SDHAF3-204ENST00000489852 CAP1Q01518 475 aa19.5■□□□□ 0.71
SDHAF3-204ENST00000489852 CRHR2Q13324 411 aa19.5■□□□□ 0.71
SDHAF3-204ENST00000489852 ZC3H12CQ9C0D7 883 aaKnown RBP19.5■□□□□ 0.71
SDHAF3-204ENST00000489852 PTCH2Q9Y6C5 1203 aa19.5■□□□□ 0.71
SDHAF3-204ENST00000489852 KDM3BQ7LBC6 1761 aa19.49■□□□□ 0.71
SDHAF3-204ENST00000489852 A0A1W2PPC1 479 aa19.49■□□□□ 0.71
SDHAF3-204ENST00000489852 LDLRAD1Q5T700 205 aa19.49■□□□□ 0.71
SDHAF3-204ENST00000489852 NBPF9Q3BBW0 867 aa19.48■□□□□ 0.71
SDHAF3-204ENST00000489852 AMER1Q5JTC6 1135 aaPredicted RBP19.48■□□□□ 0.71
SDHAF3-204ENST00000489852 TBC1D16Q8TBP0 767 aa19.48■□□□□ 0.71
SDHAF3-204ENST00000489852 SLC10A4Q96EP9 437 aa19.48■□□□□ 0.71
SDHAF3-204ENST00000489852 MIS18AQ9NYP9 233 aa19.48■□□□□ 0.71
SDHAF3-204ENST00000489852 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.48■□□□□ 0.71
SDHAF3-204ENST00000489852 LAMA3Q16787 3333 aa19.48■□□□□ 0.71
SDHAF3-204ENST00000489852 PRKAR2BP31323 418 aa19.47■□□□□ 0.71
SDHAF3-204ENST00000489852 DCTN1Q14203 1278 aa19.47■□□□□ 0.71
SDHAF3-204ENST00000489852 ARHGEF6Q15052 776 aa19.47■□□□□ 0.71
SDHAF3-204ENST00000489852 TAF7Q15545 349 aaPredicted RBP19.47■□□□□ 0.71
SDHAF3-204ENST00000489852 OTUD7BQ6GQQ9 843 aa19.47■□□□□ 0.71
SDHAF3-204ENST00000489852 ANGEL1Q9UNK9 670 aaKnown RBP19.47■□□□□ 0.71
SDHAF3-204ENST00000489852 ZBTB48P10074 688 aaPredicted RBP19.46■□□□□ 0.71
SDHAF3-204ENST00000489852 CELF1Q92879 486 aaKnown RBP19.46■□□□□ 0.71
SDHAF3-204ENST00000489852 GMLQ99445 158 aa19.46■□□□□ 0.71
SDHAF3-204ENST00000489852 NR2E3Q9Y5X4 410 aa19.46■□□□□ 0.71
SDHAF3-204ENST00000489852 ANKRD13DQ6ZTN6 518 aa19.45■□□□□ 0.7
SDHAF3-204ENST00000489852 HTATIP2Q9BUP3 242 aa19.45■□□□□ 0.7
SDHAF3-204ENST00000489852 TRMT112Q9UI30 125 aaKnown RBP19.45■□□□□ 0.7
SDHAF3-204ENST00000489852 STXBP5LQ9Y2K9 1186 aa19.45■□□□□ 0.7
SDHAF3-204ENST00000489852 SH3TC1Q8TE82 1336 aa19.44■□□□□ 0.7
SDHAF3-204ENST00000489852 COL3A1P02461 1466 aaPredicted RBP19.43■□□□□ 0.7
SDHAF3-204ENST00000489852 NLRP10Q86W26 655 aa19.43■□□□□ 0.7
SDHAF3-204ENST00000489852 SH3TC2Q8TF17 1288 aa19.43■□□□□ 0.7
SDHAF3-204ENST00000489852 WNK4Q96J92 1243 aa19.43■□□□□ 0.7
SDHAF3-204ENST00000489852 DEFB123Q8N688 67 aa19.42■□□□□ 0.7
SDHAF3-204ENST00000489852 FZD1Q9UP38 647 aa19.42■□□□□ 0.7
SDHAF3-204ENST00000489852 WNT10BO00744 389 aa19.41■□□□□ 0.7
SDHAF3-204ENST00000489852 ZBTB7BO15156 539 aaPredicted RBP19.41■□□□□ 0.7
SDHAF3-204ENST00000489852 SHISA4Q96DD7 197 aa19.41■□□□□ 0.7
SDHAF3-204ENST00000489852 RSPH6AQ9H0K4 717 aa19.41■□□□□ 0.7
SDHAF3-204ENST00000489852 HSP90AB3PQ58FF7 597 aa19.4■□□□□ 0.7
SDHAF3-204ENST00000489852 GPR153Q6NV75 609 aa19.4■□□□□ 0.7
SDHAF3-204ENST00000489852 CLMNQ96JQ2 1002 aa19.4■□□□□ 0.7
SDHAF3-204ENST00000489852 THUMPD2Q9BTF0 503 aaKnown RBP19.4■□□□□ 0.7
SDHAF3-204ENST00000489852 PSME4Q14997 1843 aa19.39■□□□□ 0.7
SDHAF3-204ENST00000489852 USP17L3A6NCW0 530 aa19.39■□□□□ 0.69
SDHAF3-204ENST00000489852 USP17L4A6NCW7 530 aa19.39■□□□□ 0.69
SDHAF3-204ENST00000489852 HTATSF1O43719 755 aaKnown RBP19.39■□□□□ 0.69
SDHAF3-204ENST00000489852 UFL1O94874 794 aa19.39■□□□□ 0.69
SDHAF3-204ENST00000489852 USP17L1Q7RTZ2 530 aa19.39■□□□□ 0.69
SDHAF3-204ENST00000489852 LAMB1P07942 1786 aa19.39■□□□□ 0.69
SDHAF3-204ENST00000489852 EIF4A1P60842 406 aaKnown RBP19.38■□□□□ 0.69
SDHAF3-204ENST00000489852 ERBB4Q15303 1308 aa19.38■□□□□ 0.69
SDHAF3-204ENST00000489852 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.38■□□□□ 0.69
SDHAF3-204ENST00000489852 OGFOD1Q8N543 542 aa19.38■□□□□ 0.69
SDHAF3-204ENST00000489852 PTPN18Q99952 460 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms