RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 MSX1P28360 303 aa10.6□□□□□ -0.71
SMC6-209ENST00000489535 PGBD3Q8N328 593 aa10.6□□□□□ -0.71
SMC6-209ENST00000489535 ZSCAN10Q96SZ4 725 aaPredicted RBP10.6□□□□□ -0.71
SMC6-209ENST00000489535 ADGRB2O60241 1585 aa10.6□□□□□ -0.71
SMC6-209ENST00000489535 TOPAZ1Q8N9V7 1692 aa10.6□□□□□ -0.71
SMC6-209ENST00000489535 TECPR2O15040 1411 aa10.59□□□□□ -0.71
SMC6-209ENST00000489535 NALCNQ8IZF0 1738 aa10.59□□□□□ -0.71
SMC6-209ENST00000489535 SAFB2Q14151 953 aaKnown RBP eCLIP10.59□□□□□ -0.71
SMC6-209ENST00000489535 C4orf17Q53FE4 359 aa10.59□□□□□ -0.71
SMC6-209ENST00000489535 FHDC1Q9C0D6 1143 aaPredicted RBP10.59□□□□□ -0.71
SMC6-209ENST00000489535 POGKQ9P215 609 aa10.59□□□□□ -0.71
SMC6-209ENST00000489535 ABCC11Q96J66 1382 aa10.59□□□□□ -0.71
SMC6-209ENST00000489535 EVC2Q86UK5 1308 aa10.58□□□□□ -0.71
SMC6-209ENST00000489535 MON2Q7Z3U7 1717 aa10.58□□□□□ -0.72
SMC6-209ENST00000489535 NEURL1BA8MQ27 555 aa10.58□□□□□ -0.72
SMC6-209ENST00000489535 GATA4P43694 442 aa10.58□□□□□ -0.72
SMC6-209ENST00000489535 RSPO4Q2I0M5 234 aaPredicted RBP10.58□□□□□ -0.72
SMC6-209ENST00000489535 EFHC2Q5JST6 749 aa10.58□□□□□ -0.72
SMC6-209ENST00000489535 CHSY3Q70JA7 882 aa10.58□□□□□ -0.72
SMC6-209ENST00000489535 PRAM1Q96QH2 718 aa10.58□□□□□ -0.72
SMC6-209ENST00000489535 STRCQ7RTU9 1775 aa10.57□□□□□ -0.72
SMC6-209ENST00000489535 CCER2I3L3R5 266 aa10.57□□□□□ -0.72
SMC6-209ENST00000489535 RFC5P40937 340 aa10.57□□□□□ -0.72
SMC6-209ENST00000489535 SLC26A8Q96RN1 970 aa10.57□□□□□ -0.72
SMC6-209ENST00000489535 FMN2Q9NZ56 1722 aa10.57□□□□□ -0.72
SMC6-209ENST00000489535 FAM135BQ49AJ0 1406 aa10.57□□□□□ -0.72
SMC6-209ENST00000489535 PTPRUQ92729 1446 aa10.57□□□□□ -0.72
SMC6-209ENST00000489535 STRCP1A6NGW2 1772 aa10.57□□□□□ -0.72
SMC6-209ENST00000489535 PLEKHH1Q9ULM0 1364 aa10.56□□□□□ -0.72
SMC6-209ENST00000489535 GNASQ5JWF2 1037 aa10.56□□□□□ -0.72
SMC6-209ENST00000489535 XAGE2Q96GT9 111 aa10.56□□□□□ -0.72
SMC6-209ENST00000489535 CRISPLD1Q9H336 500 aa10.56□□□□□ -0.72
SMC6-209ENST00000489535 PRKRIP1Q9H875 184 aaPredicted RBP10.56□□□□□ -0.72
SMC6-209ENST00000489535 PANK3Q9H999 370 aa10.56□□□□□ -0.72
SMC6-209ENST00000489535 CNGB1Q14028 1251 aaPredicted RBP10.55□□□□□ -0.72
SMC6-209ENST00000489535 WAPLQ7Z5K2 1190 aa10.55□□□□□ -0.72
SMC6-209ENST00000489535 ANKLE2Q86XL3 938 aa10.55□□□□□ -0.72
SMC6-209ENST00000489535 TRIM11Q96F44 468 aa10.55□□□□□ -0.72
SMC6-209ENST00000489535 TBX22Q9Y458 520 aa10.55□□□□□ -0.72
SMC6-209ENST00000489535 MAP2P11137 1827 aaKnown RBP10.54□□□□□ -0.72
SMC6-209ENST00000489535 SCO2A0A1W2PP80 73 aa10.54□□□□□ -0.72
SMC6-209ENST00000489535 NPHP4O75161 1426 aaPredicted RBP10.54□□□□□ -0.72
SMC6-209ENST00000489535 NWD1Q149M9 1564 aa10.54□□□□□ -0.72
SMC6-209ENST00000489535 NKAPLQ5M9Q1 402 aa10.54□□□□□ -0.72
SMC6-209ENST00000489535 YTHDC1Q96MU7 727 aaKnown RBP10.54□□□□□ -0.72
SMC6-209ENST00000489535 FAM117AQ9C073 453 aa10.54□□□□□ -0.72
SMC6-209ENST00000489535 DNAAF2Q9NVR5 837 aaKnown RBP10.54□□□□□ -0.72
SMC6-209ENST00000489535 KLF15Q9UIH9 416 aa10.54□□□□□ -0.72
SMC6-209ENST00000489535 XIRP1Q702N8 1843 aaKnown RBP10.54□□□□□ -0.72
SMC6-209ENST00000489535 KTN1Q86UP2 1357 aaKnown RBP10.53□□□□□ -0.72
SMC6-209ENST00000489535 PTCH1Q13635 1447 aa10.53□□□□□ -0.72
SMC6-209ENST00000489535 MCCD1P59942 119 aaPredicted RBP10.53□□□□□ -0.72
SMC6-209ENST00000489535 SRPK2P78362 688 aaKnown RBP10.53□□□□□ -0.72
SMC6-209ENST00000489535 TMEM214Q6NUQ4 689 aaKnown RBP10.53□□□□□ -0.72
SMC6-209ENST00000489535 SIRT1Q96EB6 747 aa10.53□□□□□ -0.72
SMC6-209ENST00000489535 GJD4Q96KN9 370 aaPredicted RBP10.53□□□□□ -0.72
SMC6-209ENST00000489535 PUS7Q96PZ0 661 aaKnown RBP10.53□□□□□ -0.72
SMC6-209ENST00000489535 PIK3R4Q99570 1358 aa10.52□□□□□ -0.72
SMC6-209ENST00000489535 ROBO2Q9HCK4 1378 aa10.52□□□□□ -0.72
SMC6-209ENST00000489535 TMC1Q8TDI8 760 aa10.52□□□□□ -0.73
SMC6-209ENST00000489535 DDRGK1Q96HY6 314 aa10.52□□□□□ -0.73
SMC6-209ENST00000489535 HCN2Q9UL51 889 aa10.52□□□□□ -0.73
SMC6-209ENST00000489535 ATAD2Q6PL18 1390 aa10.52□□□□□ -0.73
SMC6-209ENST00000489535 SPATA31C1P0DKV0 1188 aa10.51□□□□□ -0.73
SMC6-209ENST00000489535 ARTNQ5T4W7 220 aa10.51□□□□□ -0.73
SMC6-209ENST00000489535 FCHSD1Q86WN1 690 aa10.51□□□□□ -0.73
SMC6-209ENST00000489535 CDK19Q9BWU1 502 aa10.51□□□□□ -0.73
SMC6-209ENST00000489535 AMOTL2Q9Y2J4 779 aa10.51□□□□□ -0.73
SMC6-209ENST00000489535 CDC42BPGQ6DT37 1551 aa10.51□□□□□ -0.73
SMC6-209ENST00000489535 NRKQ7Z2Y5 1582 aa10.51□□□□□ -0.73
SMC6-209ENST00000489535 PARD3Q8TEW0 1356 aa10.51□□□□□ -0.73
SMC6-209ENST00000489535 NINLQ9Y2I6 1382 aa10.51□□□□□ -0.73
SMC6-209ENST00000489535 NSD3Q9BZ95 1437 aa10.5□□□□□ -0.73
SMC6-209ENST00000489535 GTF2E1P29083 439 aaPredicted RBP10.5□□□□□ -0.73
SMC6-209ENST00000489535 RALBP1Q15311 655 aa10.5□□□□□ -0.73
SMC6-209ENST00000489535 CC2D1BQ5T0F9 858 aaKnown RBP10.5□□□□□ -0.73
SMC6-209ENST00000489535 PLVAPQ9BX97 442 aa10.5□□□□□ -0.73
SMC6-209ENST00000489535 SLC12A5Q9H2X9 1139 aa10.5□□□□□ -0.73
SMC6-209ENST00000489535 KNSTRNQ9Y448 316 aa10.5□□□□□ -0.73
SMC6-209ENST00000489535 ATP7BP35670 1465 aa10.49□□□□□ -0.73
SMC6-209ENST00000489535 LMTK3Q96Q04 1460 aa10.49□□□□□ -0.73
SMC6-209ENST00000489535 ADH6P28332 368 aa10.49□□□□□ -0.73
SMC6-209ENST00000489535 NR1H3Q13133 447 aa10.49□□□□□ -0.73
SMC6-209ENST00000489535 FIGNL1Q6PIW4 674 aa10.49□□□□□ -0.73
SMC6-209ENST00000489535 KRTAP19-1Q8IUB9 90 aa10.49□□□□□ -0.73
SMC6-209ENST00000489535 RHBDD1Q8TEB9 315 aa10.49□□□□□ -0.73
SMC6-209ENST00000489535 ZCCHC2Q9C0B9 1178 aaKnown RBP10.49□□□□□ -0.73
SMC6-209ENST00000489535 ZFP64Q9NPA5 681 aa10.49□□□□□ -0.73
SMC6-209ENST00000489535 TPSG1Q9NRR2 321 aa10.49□□□□□ -0.73
SMC6-209ENST00000489535 PCDHGC4Q9Y5F7 938 aa10.49□□□□□ -0.73
SMC6-209ENST00000489535 MYBBP1AQ9BQG0 1328 aaKnown RBP10.49□□□□□ -0.73
SMC6-209ENST00000489535 ANKRD36BQ8N2N9 1353 aa10.49□□□□□ -0.73
SMC6-209ENST00000489535 CD163L1Q9NR16 1453 aa10.49□□□□□ -0.73
SMC6-209ENST00000489535 KDM4CQ9H3R0 1056 aa10.48□□□□□ -0.73
SMC6-209ENST00000489535 DYRK3O43781 588 aa10.47□□□□□ -0.73
SMC6-209ENST00000489535 CCDC184Q52MB2 194 aa10.47□□□□□ -0.73
SMC6-209ENST00000489535 CDCA7Q9BWT1 371 aaPredicted RBP10.47□□□□□ -0.73
SMC6-209ENST00000489535 GPBP1L1Q9HC44 474 aaPredicted RBP10.47□□□□□ -0.73
SMC6-209ENST00000489535 MRS2Q9HD23 443 aa10.47□□□□□ -0.73
SMC6-209ENST00000489535 AVENQ9NQS1 362 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms