RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 MYL6BP14649 208 aa20.19■□□□□ 0.82
UFD1-209ENST00000489406 ZNF280AP59817 542 aaPredicted RBP20.19■□□□□ 0.82
UFD1-209ENST00000489406 PARP10Q53GL7 1025 aa20.19■□□□□ 0.82
UFD1-209ENST00000489406 ZNF609O15014 1411 aa20.19■□□□□ 0.82
UFD1-209ENST00000489406 HCLS1P14317 486 aaPredicted RBP20.18■□□□□ 0.82
UFD1-209ENST00000489406 SPRYD7Q5W111 196 aa20.18■□□□□ 0.82
UFD1-209ENST00000489406 GIGYF2Q6Y7W6 1299 aaKnown RBP20.18■□□□□ 0.82
UFD1-209ENST00000489406 IFNL1Q8IU54 200 aa20.18■□□□□ 0.82
UFD1-209ENST00000489406 COL25A1Q9BXS0 654 aaPredicted RBP20.18■□□□□ 0.82
UFD1-209ENST00000489406 PRO3102Q9H379 93 aa20.18■□□□□ 0.82
UFD1-209ENST00000489406 KNSTRNQ9Y448 316 aa20.18■□□□□ 0.82
UFD1-209ENST00000489406 WTIPA6NIX2 430 aaPredicted RBP20.17■□□□□ 0.82
UFD1-209ENST00000489406 SOX1O00570 391 aaPredicted RBP20.17■□□□□ 0.82
UFD1-209ENST00000489406 CAP1Q01518 475 aa20.17■□□□□ 0.82
UFD1-209ENST00000489406 PRKG1Q13976 671 aa20.17■□□□□ 0.82
UFD1-209ENST00000489406 MCM10Q7L590 875 aa20.17■□□□□ 0.82
UFD1-209ENST00000489406 PHACTR3Q96KR7 559 aa20.17■□□□□ 0.82
UFD1-209ENST00000489406 POLLQ9UGP5 575 aa20.17■□□□□ 0.82
UFD1-209ENST00000489406 TAF1P21675 1872 aa20.16■□□□□ 0.82
UFD1-209ENST00000489406 SLC9C1Q4G0N8 1177 aa20.16■□□□□ 0.82
UFD1-209ENST00000489406 NBPF11Q86T75 865 aa20.16■□□□□ 0.82
UFD1-209ENST00000489406 LRCH3Q96II8 777 aa20.16■□□□□ 0.82
UFD1-209ENST00000489406 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.16■□□□□ 0.82
UFD1-209ENST00000489406 NF2P35240 595 aa20.15■□□□□ 0.82
UFD1-209ENST00000489406 INHBEP58166 350 aa20.15■□□□□ 0.82
UFD1-209ENST00000489406 TMC4Q7Z404 712 aa20.15■□□□□ 0.82
UFD1-209ENST00000489406 MYOZ2Q9NPC6 264 aa20.15■□□□□ 0.82
UFD1-209ENST00000489406 LAMB2P55268 1798 aa20.15■□□□□ 0.82
UFD1-209ENST00000489406 MANSC4A6NHS7 340 aaPredicted RBP20.14■□□□□ 0.81
UFD1-209ENST00000489406 IGF2BP3O00425 579 aaKnown RBP eCLIP20.14■□□□□ 0.81
UFD1-209ENST00000489406 GPSM2P81274 684 aa20.13■□□□□ 0.81
UFD1-209ENST00000489406 SP3Q02447 781 aa20.13■□□□□ 0.81
UFD1-209ENST00000489406 RSBN1LQ6PCB5 846 aaPredicted RBP20.13■□□□□ 0.81
UFD1-209ENST00000489406 ARMC9Q7Z3E5 817 aa20.13■□□□□ 0.81
UFD1-209ENST00000489406 EYA3Q99504 573 aa20.13■□□□□ 0.81
UFD1-209ENST00000489406 MIS18AQ9NYP9 233 aa20.13■□□□□ 0.81
UFD1-209ENST00000489406 PTCH2Q9Y6C5 1203 aa20.13■□□□□ 0.81
UFD1-209ENST00000489406 SCN9AQ15858 1988 aa20.13■□□□□ 0.81
UFD1-209ENST00000489406 ANKRD36CQ5JPF3 1778 aa20.13■□□□□ 0.81
UFD1-209ENST00000489406 CRHR2Q13324 411 aa20.12■□□□□ 0.81
UFD1-209ENST00000489406 DCTN1Q14203 1278 aa20.12■□□□□ 0.81
UFD1-209ENST00000489406 AGBL3Q8NEM8 1001 aa20.12■□□□□ 0.81
UFD1-209ENST00000489406 RTF1Q92541 710 aaKnown RBP20.12■□□□□ 0.81
UFD1-209ENST00000489406 LAMB4A4D0S4 1761 aa20.12■□□□□ 0.81
UFD1-209ENST00000489406 LRRC37AA6NMS7 1700 aa20.12■□□□□ 0.81
UFD1-209ENST00000489406 DDX60Q8IY21 1712 aaKnown RBP20.11■□□□□ 0.81
UFD1-209ENST00000489406 G3V3G9 751 aa20.11■□□□□ 0.81
UFD1-209ENST00000489406 USP17L8P0C7I0 530 aa20.11■□□□□ 0.81
UFD1-209ENST00000489406 NBPF9Q3BBW0 867 aa20.11■□□□□ 0.81
UFD1-209ENST00000489406 DCAF8Q5TAQ9 597 aa20.11■□□□□ 0.81
UFD1-209ENST00000489406 ZC3H12CQ9C0D7 883 aaKnown RBP20.11■□□□□ 0.81
UFD1-209ENST00000489406 AMER1Q5JTC6 1135 aaPredicted RBP20.1■□□□□ 0.81
UFD1-209ENST00000489406 LDLRAD1Q5T700 205 aa20.1■□□□□ 0.81
UFD1-209ENST00000489406 PRKAR2BP31323 418 aa20.09■□□□□ 0.81
UFD1-209ENST00000489406 TBC1D16Q8TBP0 767 aa20.09■□□□□ 0.81
UFD1-209ENST00000489406 CELF1Q92879 486 aaKnown RBP20.09■□□□□ 0.81
UFD1-209ENST00000489406 ANGEL1Q9UNK9 670 aaKnown RBP20.09■□□□□ 0.81
UFD1-209ENST00000489406 FZD1Q9UP38 647 aa20.09■□□□□ 0.81
UFD1-209ENST00000489406 UNC80Q8N2C7 3258 aa20.09■□□□□ 0.81
UFD1-209ENST00000489406 NECTIN2Q92692 538 aa20.08■□□□□ 0.81
UFD1-209ENST00000489406 SLC10A4Q96EP9 437 aa20.08■□□□□ 0.81
UFD1-209ENST00000489406 KDM3BQ7LBC6 1761 aa20.08■□□□□ 0.8
UFD1-209ENST00000489406 LAMA3Q16787 3333 aa20.07■□□□□ 0.8
UFD1-209ENST00000489406 TAF7Q15545 349 aaPredicted RBP20.07■□□□□ 0.8
UFD1-209ENST00000489406 SH3TC2Q8TF17 1288 aa20.07■□□□□ 0.8
UFD1-209ENST00000489406 GMLQ99445 158 aa20.07■□□□□ 0.8
UFD1-209ENST00000489406 A0A1W2PPC1 479 aa20.06■□□□□ 0.8
UFD1-209ENST00000489406 TRMT112Q9UI30 125 aaKnown RBP20.06■□□□□ 0.8
UFD1-209ENST00000489406 ZBTB48P10074 688 aaPredicted RBP20.05■□□□□ 0.8
UFD1-209ENST00000489406 OTUD7BQ6GQQ9 843 aa20.05■□□□□ 0.8
UFD1-209ENST00000489406 NLRP10Q86W26 655 aa20.05■□□□□ 0.8
UFD1-209ENST00000489406 DEFB123Q8N688 67 aa20.05■□□□□ 0.8
UFD1-209ENST00000489406 WNK4Q96J92 1243 aa20.05■□□□□ 0.8
UFD1-209ENST00000489406 THUMPD2Q9BTF0 503 aaKnown RBP20.05■□□□□ 0.8
UFD1-209ENST00000489406 NR2E3Q9Y5X4 410 aa20.05■□□□□ 0.8
UFD1-209ENST00000489406 COL3A1P02461 1466 aaPredicted RBP20.05■□□□□ 0.8
UFD1-209ENST00000489406 ZNF428Q96B54 188 aa20.04■□□□□ 0.8
UFD1-209ENST00000489406 SHISA4Q96DD7 197 aa20.04■□□□□ 0.8
UFD1-209ENST00000489406 CLMNQ96JQ2 1002 aa20.04■□□□□ 0.8
UFD1-209ENST00000489406 HTATIP2Q9BUP3 242 aa20.04■□□□□ 0.8
UFD1-209ENST00000489406 STXBP5LQ9Y2K9 1186 aa20.04■□□□□ 0.8
UFD1-209ENST00000489406 SH3TC1Q8TE82 1336 aa20.03■□□□□ 0.8
UFD1-209ENST00000489406 ZBTB7BO15156 539 aaPredicted RBP20.03■□□□□ 0.8
UFD1-209ENST00000489406 ARHGEF6Q15052 776 aa20.03■□□□□ 0.8
UFD1-209ENST00000489406 RSPH6AQ9H0K4 717 aa20.03■□□□□ 0.8
UFD1-209ENST00000489406 WNT10BO00744 389 aa20.02■□□□□ 0.8
UFD1-209ENST00000489406 ANKRD13DQ6ZTN6 518 aa20.02■□□□□ 0.8
UFD1-209ENST00000489406 Q7L0L9 218 aa20.02■□□□□ 0.8
UFD1-209ENST00000489406 UFL1O94874 794 aa20.01■□□□□ 0.79
UFD1-209ENST00000489406 PTPN18Q99952 460 aa20.01■□□□□ 0.79
UFD1-209ENST00000489406 COL4A1P02462 1669 aa20■□□□□ 0.79
UFD1-209ENST00000489406 PHF6Q8IWS0 365 aaKnown RBP eCLIP20■□□□□ 0.79
UFD1-209ENST00000489406 STAP2Q9UGK3 403 aa20■□□□□ 0.79
UFD1-209ENST00000489406 USP17L3A6NCW0 530 aa19.99■□□□□ 0.79
UFD1-209ENST00000489406 USP17L4A6NCW7 530 aa19.99■□□□□ 0.79
UFD1-209ENST00000489406 SASH1O94885 1247 aa19.99■□□□□ 0.79
UFD1-209ENST00000489406 EIF4A1P60842 406 aaKnown RBP19.99■□□□□ 0.79
UFD1-209ENST00000489406 MTFR1Q15390 333 aa19.99■□□□□ 0.79
UFD1-209ENST00000489406 USP17L1Q7RTZ2 530 aa19.99■□□□□ 0.79
UFD1-209ENST00000489406 PRDM6Q9NQX0 595 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms