RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 MANSC4A6NHS7 340 aaPredicted RBP15.46■□□□□ 0.07
HDAC6-233ENST00000489352 PARP10Q53GL7 1025 aa15.46■□□□□ 0.07
HDAC6-233ENST00000489352 PRAMEF18Q5VWM3 479 aa15.46■□□□□ 0.07
HDAC6-233ENST00000489352 OTUD7BQ6GQQ9 843 aa15.46■□□□□ 0.07
HDAC6-233ENST00000489352 IFNL1Q8IU54 200 aa15.46■□□□□ 0.07
HDAC6-233ENST00000489352 EYA3Q99504 573 aa15.46■□□□□ 0.07
HDAC6-233ENST00000489352 KCNQ5Q9NR82 932 aa15.46■□□□□ 0.07
HDAC6-233ENST00000489352 NR2E3Q9Y5X4 410 aa15.46■□□□□ 0.07
HDAC6-233ENST00000489352 LAMB2P55268 1798 aa15.46■□□□□ 0.07
HDAC6-233ENST00000489352 SP3Q02447 781 aa15.45■□□□□ 0.06
HDAC6-233ENST00000489352 GRAPQ13588 217 aa15.45■□□□□ 0.06
HDAC6-233ENST00000489352 GRAPLQ8TC17 118 aaPredicted RBP15.45■□□□□ 0.06
HDAC6-233ENST00000489352 HTATIP2Q9BUP3 242 aa15.45■□□□□ 0.06
HDAC6-233ENST00000489352 UTP14AQ9BVJ6 771 aaKnown RBP15.45■□□□□ 0.06
HDAC6-233ENST00000489352 RRP7AQ9Y3A4 280 aaKnown RBP15.45■□□□□ 0.06
HDAC6-233ENST00000489352 A0A1W2PPC1 479 aa15.44■□□□□ 0.06
HDAC6-233ENST00000489352 VIL1P09327 827 aaKnown RBP15.44■□□□□ 0.06
HDAC6-233ENST00000489352 PTPN12Q05209 780 aaKnown RBP15.44■□□□□ 0.06
HDAC6-233ENST00000489352 PRKG1Q13976 671 aa15.44■□□□□ 0.06
HDAC6-233ENST00000489352 SPRYD7Q5W111 196 aa15.44■□□□□ 0.06
HDAC6-233ENST00000489352 ZNF34Q8IZ26 560 aa15.44■□□□□ 0.06
HDAC6-233ENST00000489352 RTF1Q92541 710 aaKnown RBP15.44■□□□□ 0.06
HDAC6-233ENST00000489352 SCAF8Q9UPN6 1271 aaKnown RBP15.44■□□□□ 0.06
HDAC6-233ENST00000489352 CEMIPQ8WUJ3 1361 aa15.44■□□□□ 0.06
HDAC6-233ENST00000489352 KDM3BQ7LBC6 1761 aa15.44■□□□□ 0.06
HDAC6-233ENST00000489352 ZNF609O15014 1411 aa15.43■□□□□ 0.06
HDAC6-233ENST00000489352 U2SURPO15042 1029 aaKnown RBP15.43■□□□□ 0.06
HDAC6-233ENST00000489352 MYL6BP14649 208 aa15.43■□□□□ 0.06
HDAC6-233ENST00000489352 SLC10A5Q5PT55 438 aa15.43■□□□□ 0.06
HDAC6-233ENST00000489352 SLC10A4Q96EP9 437 aa15.43■□□□□ 0.06
HDAC6-233ENST00000489352 LRCH3Q96II8 777 aa15.43■□□□□ 0.06
HDAC6-233ENST00000489352 MYOZ2Q9NPC6 264 aa15.43■□□□□ 0.06
HDAC6-233ENST00000489352 KNSTRNQ9Y448 316 aa15.43■□□□□ 0.06
HDAC6-233ENST00000489352 LAMB4A4D0S4 1761 aa15.43■□□□□ 0.06
HDAC6-233ENST00000489352 RTL9Q8NET4 1388 aa15.42■□□□□ 0.06
HDAC6-233ENST00000489352 WTIPA6NIX2 430 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-233ENST00000489352 TTLL7Q6ZT98 887 aa15.42■□□□□ 0.06
HDAC6-233ENST00000489352 DEFB123Q8N688 67 aa15.42■□□□□ 0.06
HDAC6-233ENST00000489352 AGBL3Q8NEM8 1001 aa15.42■□□□□ 0.06
HDAC6-233ENST00000489352 NECTIN2Q92692 538 aa15.42■□□□□ 0.06
HDAC6-233ENST00000489352 ZC3H12CQ9C0D7 883 aaKnown RBP15.42■□□□□ 0.06
HDAC6-233ENST00000489352 USP17L8P0C7I0 530 aa15.41■□□□□ 0.06
HDAC6-233ENST00000489352 ZNF280AP59817 542 aaPredicted RBP15.41■□□□□ 0.06
HDAC6-233ENST00000489352 GIGYF2Q6Y7W6 1299 aaKnown RBP15.41■□□□□ 0.06
HDAC6-233ENST00000489352 DUOX1Q9NRD9 1551 aa15.41■□□□□ 0.06
HDAC6-233ENST00000489352 SCN9AQ15858 1988 aa15.4■□□□□ 0.06
HDAC6-233ENST00000489352 SOX1O00570 391 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-233ENST00000489352 CRHR2Q13324 411 aa15.4■□□□□ 0.06
HDAC6-233ENST00000489352 ANGEL1Q9UNK9 670 aaKnown RBP15.4■□□□□ 0.06
HDAC6-233ENST00000489352 STXBP5LQ9Y2K9 1186 aa15.4■□□□□ 0.06
HDAC6-233ENST00000489352 PTCH2Q9Y6C5 1203 aa15.4■□□□□ 0.06
HDAC6-233ENST00000489352 LAMA3Q16787 3333 aa15.39■□□□□ 0.05
HDAC6-233ENST00000489352 HCLS1P14317 486 aaPredicted RBP15.39■□□□□ 0.05
HDAC6-233ENST00000489352 RSBN1LQ6PCB5 846 aaPredicted RBP15.39■□□□□ 0.05
HDAC6-233ENST00000489352 PRO3102Q9H379 93 aa15.39■□□□□ 0.05
HDAC6-233ENST00000489352 LRRC37AA6NMS7 1700 aa15.39■□□□□ 0.05
HDAC6-233ENST00000489352 IGF2BP3O00425 579 aaKnown RBP eCLIP15.38■□□□□ 0.05
HDAC6-233ENST00000489352 ZBTB48P10074 688 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-233ENST00000489352 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.38■□□□□ 0.05
HDAC6-233ENST00000489352 PRDM6Q9NQX0 595 aa15.38■□□□□ 0.05
HDAC6-233ENST00000489352 POLLQ9UGP5 575 aa15.38■□□□□ 0.05
HDAC6-233ENST00000489352 GPR153Q6NV75 609 aa15.37■□□□□ 0.05
HDAC6-233ENST00000489352 NKX2-3Q8TAU0 364 aa15.37■□□□□ 0.05
HDAC6-233ENST00000489352 GPSM2P81274 684 aa15.36■□□□□ 0.05
HDAC6-233ENST00000489352 MCM10Q7L590 875 aa15.36■□□□□ 0.05
HDAC6-233ENST00000489352 OGFOD1Q8N543 542 aa15.36■□□□□ 0.05
HDAC6-233ENST00000489352 SH3TC2Q8TF17 1288 aa15.36■□□□□ 0.05
HDAC6-233ENST00000489352 PSME4Q14997 1843 aa15.36■□□□□ 0.05
HDAC6-233ENST00000489352 ZBTB7BO15156 539 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-233ENST00000489352 NBPF9Q3BBW0 867 aa15.35■□□□□ 0.05
HDAC6-233ENST00000489352 LDLRAD1Q5T700 205 aa15.35■□□□□ 0.05
HDAC6-233ENST00000489352 TRMT112Q9UI30 125 aaKnown RBP15.35■□□□□ 0.05
HDAC6-233ENST00000489352 KIF22Q14807 665 aa15.34■□□□□ 0.05
HDAC6-233ENST00000489352 TBC1D16Q8TBP0 767 aa15.34■□□□□ 0.05
HDAC6-233ENST00000489352 WNK4Q96J92 1243 aa15.34■□□□□ 0.05
HDAC6-233ENST00000489352 LAMB1P07942 1786 aa15.34■□□□□ 0.05
HDAC6-233ENST00000489352 PPP1R12BO60237 982 aaPredicted RBP15.33■□□□□ 0.04
HDAC6-233ENST00000489352 EVI5O60447 810 aa15.33■□□□□ 0.04
HDAC6-233ENST00000489352 TAF7Q15545 349 aaPredicted RBP15.33■□□□□ 0.04
HDAC6-233ENST00000489352 Q7L0L9 218 aa15.33■□□□□ 0.04
HDAC6-233ENST00000489352 ANKIB1Q9P2G1 1089 aa15.33■□□□□ 0.04
HDAC6-233ENST00000489352 STAP2Q9UGK3 403 aa15.33■□□□□ 0.04
HDAC6-233ENST00000489352 ZNF646O15015 1829 aaPredicted RBP15.32■□□□□ 0.04
HDAC6-233ENST00000489352 WDHD1O75717 1129 aaPredicted RBP15.32■□□□□ 0.04
HDAC6-233ENST00000489352 SH3TC1Q8TE82 1336 aa15.32■□□□□ 0.04
HDAC6-233ENST00000489352 VCANP13611 3396 aa15.32■□□□□ 0.04
HDAC6-233ENST00000489352 USP17L3A6NCW0 530 aa15.31■□□□□ 0.04
HDAC6-233ENST00000489352 USP17L4A6NCW7 530 aa15.31■□□□□ 0.04
HDAC6-233ENST00000489352 HSP90AB3PQ58FF7 597 aa15.31■□□□□ 0.04
HDAC6-233ENST00000489352 USP17L1Q7RTZ2 530 aa15.31■□□□□ 0.04
HDAC6-233ENST00000489352 APOBEC3FQ8IUX4 373 aaKnown RBP15.31■□□□□ 0.04
HDAC6-233ENST00000489352 PHACTR3Q96KR7 559 aa15.31■□□□□ 0.04
HDAC6-233ENST00000489352 ZFYVE28Q9HCC9 887 aa15.31■□□□□ 0.04
HDAC6-233ENST00000489352 MIS18AQ9NYP9 233 aa15.31■□□□□ 0.04
HDAC6-233ENST00000489352 WNT10BO00744 389 aa15.3■□□□□ 0.04
HDAC6-233ENST00000489352 UFL1O94874 794 aa15.3■□□□□ 0.04
HDAC6-233ENST00000489352 COL9A1P20849 921 aa15.3■□□□□ 0.04
HDAC6-233ENST00000489352 PRKAR2BP31323 418 aa15.3■□□□□ 0.04
HDAC6-233ENST00000489352 CELF1Q92879 486 aaKnown RBP15.3■□□□□ 0.04
HDAC6-233ENST00000489352 MTMR10Q9NXD2 777 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms