RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 PSME1Q06323 249 aa5.82□□□□□ -1.48
CDC42BPA-213ENST00000488131 KIAA2012Q0VF49 1180 aa5.82□□□□□ -1.48
CDC42BPA-213ENST00000488131 GALNT6Q8NCL4 622 aa5.82□□□□□ -1.48
CDC42BPA-213ENST00000488131 SIRT1Q96EB6 747 aa5.82□□□□□ -1.48
CDC42BPA-213ENST00000488131 CFAP74Q9C0B2 1584 aa5.82□□□□□ -1.48
CDC42BPA-213ENST00000488131 CCDC125Q86Z20 511 aa5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 CCDC116Q8IYX3 515 aa5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 ANKRD7Q92527 254 aa5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 FEZ1Q99689 392 aa5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 ZNF358Q9NW07 568 aa5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 DNMT3LQ9UJW3 386 aa5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 PTPRGP23470 1445 aa5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 PBRM1Q86U86 1689 aa5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 DNMBPQ6XZF7 1577 aa5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 CDK11BP21127 795 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 SERPINB4P48594 390 aa5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 CBX1P83916 185 aa5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 ZSCAN23Q3MJ62 389 aa5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 PPP1R26Q5T8A7 1209 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 CC2D2BQ6DHV5 1058 aa5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 CAPN12Q6ZSI9 719 aa5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 SV2AQ7L0J3 742 aa5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 TAS1R3Q7RTX0 852 aa5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 DNAJC2Q99543 621 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 KRTAP4-12Q9BQ66 201 aa5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 COL25A1Q9BXS0 654 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 RBSNQ9H1K0 784 aa5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 MTMR7Q9Y216 660 aa5.81□□□□□ -1.48
CDC42BPA-213ENST00000488131 WDR7Q9Y4E6 1490 aa5.8□□□□□ -1.48
CDC42BPA-213ENST00000488131 PHF20L1A8MW92 1017 aa5.8□□□□□ -1.48
CDC42BPA-213ENST00000488131 BCAR3O75815 825 aa5.8□□□□□ -1.48
CDC42BPA-213ENST00000488131 MYCP01106 439 aaPredicted RBP5.8□□□□□ -1.48
CDC42BPA-213ENST00000488131 FAM193AP78312 1265 aa5.8□□□□□ -1.48
CDC42BPA-213ENST00000488131 PTSQ03393 145 aa5.8□□□□□ -1.48
CDC42BPA-213ENST00000488131 SND1Q7KZF4 910 aaKnown RBP eCLIP5.8□□□□□ -1.48
CDC42BPA-213ENST00000488131 GPR161Q8N6U8 529 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-213ENST00000488131 PIBF1Q8WXW3 757 aa5.8□□□□□ -1.48
CDC42BPA-213ENST00000488131 SPTLC3Q9NUV7 552 aa5.8□□□□□ -1.48
CDC42BPA-213ENST00000488131 CXXC1Q9P0U4 656 aaPredicted RBP5.8□□□□□ -1.48
CDC42BPA-213ENST00000488131 KIF3AQ9Y496 699 aa5.8□□□□□ -1.48
CDC42BPA-213ENST00000488131 DDX49Q9Y6V7 483 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-213ENST00000488131 NUP160Q12769 1436 aa5.8□□□□□ -1.48
CDC42BPA-213ENST00000488131 ERBINQ96RT1 1412 aa5.8□□□□□ -1.48
CDC42BPA-213ENST00000488131 SCAF11Q99590 1463 aaKnown RBP5.8□□□□□ -1.48
CDC42BPA-213ENST00000488131 DISP3Q9P2K9 1392 aa5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 VGLL3A8MV65 326 aa5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 TULP2O00295 520 aa5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 BAG4O95429 457 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 CYP2E1P05181 493 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 ARID4AP29374 1257 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 WEE1P30291 646 aa5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 DHX9Q08211 1270 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 CREBRFQ8IUR6 639 aa5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 C1orf216Q8TAB5 229 aa5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 HINFPQ9BQA5 517 aa5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 TSPYL1Q9H0U9 437 aa5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 RWDD1Q9H446 243 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 ETNK1Q9HBU6 452 aa5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 CGNQ9P2M7 1197 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 ASXL1Q8IXJ9 1541 aa5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 MYOM1P52179 1685 aa5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 SHANK2Q9UPX8 1470 aa5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 KANK1Q14678 1352 aa5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 CCDC66A2RUB6 948 aa5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 FIGNL2A6NMB9 653 aa5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 M0R2N6 131 aa5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 FKBP5Q13451 457 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 WDR43Q15061 677 aaKnown RBP eCLIP5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 SYCP1Q15431 976 aa5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 DNTTIP2Q5QJE6 756 aaKnown RBP5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 PDCL2Q8N4E4 241 aa5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 CCDC155Q8N6L0 562 aa5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 KDF1Q8NAX2 398 aaPredicted RBP5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 TESK2Q96S53 571 aa5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 OGFRQ9NZT2 677 aa5.79□□□□□ -1.48
CDC42BPA-213ENST00000488131 IQSEC2Q5JU85 1478 aa5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 MAGI2Q86UL8 1455 aa5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 CDK13Q14004 1512 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 CTIFO43310 598 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 PROCP04070 461 aa5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 PPP2R1AP30153 589 aa5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 EPHA4P54764 986 aa5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 GDF10P55107 478 aa5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 IRX3P78415 501 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 FOXD4L5Q5VV16 416 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 LRSAM1Q6UWE0 723 aa5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 TNS4Q8IZW8 715 aa5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 PANK1Q8TE04 598 aa5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 FOXD4L4Q8WXT5 416 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 DCAF5Q96JK2 942 aa5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 KIF2CQ99661 725 aa5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 YY1AP1Q9H869 796 aa5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 LMBRD1Q9NUN5 540 aa5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 CLTCL1P53675 1640 aa5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 ADCY10Q96PN6 1610 aa5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 CCDC141Q6ZP82 1450 aa5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 KIF16BQ96L93 1317 aa5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 IQGAP1P46940 1657 aa5.78□□□□□ -1.48
CDC42BPA-213ENST00000488131 LAMC3Q9Y6N6 1575 aa5.77□□□□□ -1.49
CDC42BPA-213ENST00000488131 SPINT1O43278 529 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms