RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 THUMPD2Q9BTF0 503 aaKnown RBP10.33□□□□□ -0.76
NECTIN3-209ENST00000488016 SLC52A2Q9HAB3 445 aa10.33□□□□□ -0.76
NECTIN3-209ENST00000488016 TOR4AQ9NXH8 423 aa10.33□□□□□ -0.76
NECTIN3-209ENST00000488016 STK32BQ9NY57 414 aa10.33□□□□□ -0.76
NECTIN3-209ENST00000488016 LOC102724428A0A0B4J2F2 783 aa10.32□□□□□ -0.76
NECTIN3-209ENST00000488016 GNAT3A8MTJ3 354 aa10.32□□□□□ -0.76
NECTIN3-209ENST00000488016 KCNQ3O43525 872 aa10.32□□□□□ -0.76
NECTIN3-209ENST00000488016 ZBTB7AO95365 584 aa10.32□□□□□ -0.76
NECTIN3-209ENST00000488016 WNT7BP56706 349 aa10.32□□□□□ -0.76
NECTIN3-209ENST00000488016 SIK1P57059 783 aa10.32□□□□□ -0.76
NECTIN3-209ENST00000488016 RIC3Q7Z5B4 369 aa10.32□□□□□ -0.76
NECTIN3-209ENST00000488016 ADAMTS8Q9UP79 889 aa10.32□□□□□ -0.76
NECTIN3-209ENST00000488016 SIPA1L3O60292 1781 aaPredicted RBP10.31□□□□□ -0.76
NECTIN3-209ENST00000488016 C4BP0C0L5 1744 aa10.31□□□□□ -0.76
NECTIN3-209ENST00000488016 TJP1Q07157 1748 aa10.31□□□□□ -0.76
NECTIN3-209ENST00000488016 ANP32CO43423 234 aa10.31□□□□□ -0.76
NECTIN3-209ENST00000488016 SLC27A3Q5K4L6 730 aa10.31□□□□□ -0.76
NECTIN3-209ENST00000488016 ZNF787Q6DD87 383 aa10.31□□□□□ -0.76
NECTIN3-209ENST00000488016 SMARCC1Q92922 1105 aaPredicted RBP10.31□□□□□ -0.76
NECTIN3-209ENST00000488016 ZBTB3Q9H5J0 574 aa10.31□□□□□ -0.76
NECTIN3-209ENST00000488016 MIS18AQ9NYP9 233 aa10.31□□□□□ -0.76
NECTIN3-209ENST00000488016 KCPQ6ZWJ8 1503 aa10.31□□□□□ -0.76
NECTIN3-209ENST00000488016 PNPLA7Q6ZV29 1317 aa10.31□□□□□ -0.76
NECTIN3-209ENST00000488016 WDR43Q15061 677 aaKnown RBP eCLIP10.3□□□□□ -0.76
NECTIN3-209ENST00000488016 NEUROD2Q15784 382 aa10.3□□□□□ -0.76
NECTIN3-209ENST00000488016 NFE2L2Q16236 605 aa10.3□□□□□ -0.76
NECTIN3-209ENST00000488016 DESI1Q6ICB0 168 aa10.3□□□□□ -0.76
NECTIN3-209ENST00000488016 SNIP1Q8TAD8 396 aaKnown RBP10.3□□□□□ -0.76
NECTIN3-209ENST00000488016 MRGPRX2Q96LB1 330 aa10.3□□□□□ -0.76
NECTIN3-209ENST00000488016 SYT17Q9BSW7 474 aa10.3□□□□□ -0.76
NECTIN3-209ENST00000488016 PCDHB15Q9Y5E8 787 aa10.3□□□□□ -0.76
NECTIN3-209ENST00000488016 MAPK8IP3Q9UPT6 1336 aa10.3□□□□□ -0.76
NECTIN3-209ENST00000488016 CEMIPQ8WUJ3 1361 aa10.29□□□□□ -0.76
NECTIN3-209ENST00000488016 GIGYF1O75420 1035 aaPredicted RBP10.29□□□□□ -0.76
NECTIN3-209ENST00000488016 CSPP1Q1MSJ5 1256 aa10.29□□□□□ -0.76
NECTIN3-209ENST00000488016 FHDC1Q9C0D6 1143 aaPredicted RBP10.29□□□□□ -0.76
NECTIN3-209ENST00000488016 TFCP2L1Q9NZI6 479 aa10.29□□□□□ -0.76
NECTIN3-209ENST00000488016 COL5A3P25940 1745 aaPredicted RBP10.29□□□□□ -0.76
NECTIN3-209ENST00000488016 PRAMEF22A3QJZ6 481 aa10.28□□□□□ -0.76
NECTIN3-209ENST00000488016 SKOR1P84550 965 aa10.28□□□□□ -0.76
NECTIN3-209ENST00000488016 TEFQ10587 303 aa10.28□□□□□ -0.76
NECTIN3-209ENST00000488016 RC3H1Q5TC82 1133 aaKnown RBP10.28□□□□□ -0.76
NECTIN3-209ENST00000488016 PRPF38BQ5VTL8 546 aaKnown RBP10.28□□□□□ -0.76
NECTIN3-209ENST00000488016 MYSM1Q5VVJ2 828 aa10.28□□□□□ -0.76
NECTIN3-209ENST00000488016 MSL1Q68DK7 614 aa10.28□□□□□ -0.76
NECTIN3-209ENST00000488016 COL23A1Q86Y22 540 aaPredicted RBP10.28□□□□□ -0.76
NECTIN3-209ENST00000488016 DNAJC10Q8IXB1 793 aa10.28□□□□□ -0.76
NECTIN3-209ENST00000488016 MRS2Q9HD23 443 aa10.28□□□□□ -0.76
NECTIN3-209ENST00000488016 UBR2Q8IWV8 1755 aa10.28□□□□□ -0.76
NECTIN3-209ENST00000488016 MYH14Q7Z406 1995 aaKnown RBP10.28□□□□□ -0.76
NECTIN3-209ENST00000488016 UBR3Q6ZT12 1888 aa10.27□□□□□ -0.76
NECTIN3-209ENST00000488016 CHD4Q14839 1912 aa10.27□□□□□ -0.76
NECTIN3-209ENST00000488016 TMPOP42166 694 aaKnown RBP10.27□□□□□ -0.77
NECTIN3-209ENST00000488016 RIPK4P57078 832 aa10.27□□□□□ -0.77
NECTIN3-209ENST00000488016 PTCRAQ6ISU1 281 aaPredicted RBP10.27□□□□□ -0.77
NECTIN3-209ENST00000488016 RTF1Q92541 710 aaKnown RBP10.27□□□□□ -0.77
NECTIN3-209ENST00000488016 ZNF496Q96IT1 587 aaPredicted RBP10.27□□□□□ -0.77
NECTIN3-209ENST00000488016 EVA1BQ9NVM1 165 aa10.27□□□□□ -0.77
NECTIN3-209ENST00000488016 BTBD11A6QL63 1104 aa10.26□□□□□ -0.77
NECTIN3-209ENST00000488016 ST8SIA5O15466 376 aa10.26□□□□□ -0.77
NECTIN3-209ENST00000488016 KCNH2Q12809 1159 aa10.26□□□□□ -0.77
NECTIN3-209ENST00000488016 UNC93B1Q9H1C4 597 aa10.26□□□□□ -0.77
NECTIN3-209ENST00000488016 QSER1Q2KHR3 1735 aa10.26□□□□□ -0.77
NECTIN3-209ENST00000488016 GOLGB1Q14789 3259 aaKnown RBP10.25□□□□□ -0.77
NECTIN3-209ENST00000488016 CFAP99D6REC4 459 aa10.25□□□□□ -0.77
NECTIN3-209ENST00000488016 APAF1O14727 1248 aa10.25□□□□□ -0.77
NECTIN3-209ENST00000488016 AVPP01185 164 aa10.25□□□□□ -0.77
NECTIN3-209ENST00000488016 NEFMP07197 916 aa10.25□□□□□ -0.77
NECTIN3-209ENST00000488016 PIP4K2AP48426 406 aaPredicted RBP10.25□□□□□ -0.77
NECTIN3-209ENST00000488016 ZNF790Q6PG37 636 aa10.25□□□□□ -0.77
NECTIN3-209ENST00000488016 PNISRQ8TF01 805 aaKnown RBP10.25□□□□□ -0.77
NECTIN3-209ENST00000488016 RUNDC1Q96C34 613 aa10.25□□□□□ -0.77
NECTIN3-209ENST00000488016 AAASQ9NRG9 546 aa10.25□□□□□ -0.77
NECTIN3-209ENST00000488016 AXIN1O15169 862 aa10.24□□□□□ -0.77
NECTIN3-209ENST00000488016 CTHP32929 405 aa10.24□□□□□ -0.77
NECTIN3-209ENST00000488016 CRKLP46109 303 aaKnown RBP10.24□□□□□ -0.77
NECTIN3-209ENST00000488016 CTC1Q2NKJ3 1217 aa10.24□□□□□ -0.77
NECTIN3-209ENST00000488016 TTC5Q8N0Z6 440 aa10.24□□□□□ -0.77
NECTIN3-209ENST00000488016 EHBP1Q8NDI1 1231 aa10.24□□□□□ -0.77
NECTIN3-209ENST00000488016 LIMD1Q9UGP4 676 aa10.24□□□□□ -0.77
NECTIN3-209ENST00000488016 ZBTB1Q9Y2K1 713 aa10.24□□□□□ -0.77
NECTIN3-209ENST00000488016 KDM3BQ7LBC6 1761 aa10.24□□□□□ -0.77
NECTIN3-209ENST00000488016 CICQ96RK0 1608 aaPredicted RBP10.23□□□□□ -0.77
NECTIN3-209ENST00000488016 ZNF831Q5JPB2 1677 aa10.23□□□□□ -0.77
NECTIN3-209ENST00000488016 TUSC1Q2TAM9 212 aa10.23□□□□□ -0.77
NECTIN3-209ENST00000488016 INTS5Q6P9B9 1019 aaKnown RBP10.23□□□□□ -0.77
NECTIN3-209ENST00000488016 LYPD8Q6UX82 237 aa10.23□□□□□ -0.77
NECTIN3-209ENST00000488016 FAM9BQ8IZU0 186 aa10.23□□□□□ -0.77
NECTIN3-209ENST00000488016 CRIPAKQ8N1N5 446 aa10.23□□□□□ -0.77
NECTIN3-209ENST00000488016 SRP68Q9UHB9 627 aaKnown RBP10.23□□□□□ -0.77
NECTIN3-209ENST00000488016 C4AP0C0L4 1744 aa10.23□□□□□ -0.77
NECTIN3-209ENST00000488016 HEG1Q9ULI3 1381 aa10.23□□□□□ -0.77
NECTIN3-209ENST00000488016 J3QL48 77 aa10.22□□□□□ -0.77
NECTIN3-209ENST00000488016 HTATSF1O43719 755 aaKnown RBP10.22□□□□□ -0.77
NECTIN3-209ENST00000488016 CYP19A1P11511 503 aaPredicted RBP10.22□□□□□ -0.77
NECTIN3-209ENST00000488016 SMPD1P17405 629 aa10.22□□□□□ -0.77
NECTIN3-209ENST00000488016 CLK2P49760 499 aaKnown RBP10.22□□□□□ -0.77
NECTIN3-209ENST00000488016 TAF7Q15545 349 aaPredicted RBP10.22□□□□□ -0.77
NECTIN3-209ENST00000488016 KRT24Q2M2I5 525 aa10.22□□□□□ -0.77
NECTIN3-209ENST00000488016 TSC1Q92574 1164 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms