RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 GRAPQ13588 217 aa12.99□□□□□ -0.33
HLA-DMB-261ENST00000487996 ATG9AQ7Z3C6 839 aa12.99□□□□□ -0.33
HLA-DMB-261ENST00000487996 TMC4Q7Z404 712 aa12.99□□□□□ -0.33
HLA-DMB-261ENST00000487996 GRAPLQ8TC17 118 aaPredicted RBP12.99□□□□□ -0.33
HLA-DMB-261ENST00000487996 CRAMP1Q96RY5 1269 aa12.99□□□□□ -0.33
HLA-DMB-261ENST00000487996 BSDC1Q9NW68 430 aaPredicted RBP12.99□□□□□ -0.33
HLA-DMB-261ENST00000487996 ANKRD31Q8N7Z5 1873 aa12.99□□□□□ -0.33
HLA-DMB-261ENST00000487996 SASH1O94885 1247 aa12.99□□□□□ -0.33
HLA-DMB-261ENST00000487996 NPR1P16066 1061 aa12.99□□□□□ -0.33
HLA-DMB-261ENST00000487996 METTL24Q5JXM2 366 aa12.99□□□□□ -0.33
HLA-DMB-261ENST00000487996 GPATCH3Q96I76 525 aa12.99□□□□□ -0.33
HLA-DMB-261ENST00000487996 RIPOR2Q9Y4F9 1068 aa12.99□□□□□ -0.33
HLA-DMB-261ENST00000487996 C10orf71Q711Q0 1435 aa12.98□□□□□ -0.33
HLA-DMB-261ENST00000487996 H0YIN7 160 aa12.98□□□□□ -0.33
HLA-DMB-261ENST00000487996 BBOX1O75936 387 aa12.98□□□□□ -0.33
HLA-DMB-261ENST00000487996 IFIT2P09913 472 aaKnown RBP12.98□□□□□ -0.33
HLA-DMB-261ENST00000487996 SRGNP10124 158 aa12.98□□□□□ -0.33
HLA-DMB-261ENST00000487996 ALDH1B1P30837 517 aa12.98□□□□□ -0.33
HLA-DMB-261ENST00000487996 LRRC24Q50LG9 513 aa12.98□□□□□ -0.33
HLA-DMB-261ENST00000487996 MASTLQ96GX5 879 aa12.98□□□□□ -0.33
HLA-DMB-261ENST00000487996 IL1RAPL2Q9NP60 686 aa12.98□□□□□ -0.33
HLA-DMB-261ENST00000487996 SMARCA5O60264 1052 aaPredicted RBP12.97□□□□□ -0.33
HLA-DMB-261ENST00000487996 RGS3P49796 1198 aa12.97□□□□□ -0.33
HLA-DMB-261ENST00000487996 TFCP2Q12800 502 aa12.97□□□□□ -0.33
HLA-DMB-261ENST00000487996 PUS3Q9BZE2 481 aaKnown RBP12.97□□□□□ -0.33
HLA-DMB-261ENST00000487996 SPEF2Q9C093 1822 aa12.97□□□□□ -0.33
HLA-DMB-261ENST00000487996 TNNI3KQ59H18 835 aa12.96□□□□□ -0.33
HLA-DMB-261ENST00000487996 STYK1Q6J9G0 422 aa12.96□□□□□ -0.33
HLA-DMB-261ENST00000487996 AACSQ86V21 672 aa12.96□□□□□ -0.33
HLA-DMB-261ENST00000487996 CELF1Q92879 486 aaKnown RBP12.96□□□□□ -0.33
HLA-DMB-261ENST00000487996 ANKRD2Q9GZV1 360 aa12.96□□□□□ -0.33
HLA-DMB-261ENST00000487996 TMX4Q9H1E5 349 aaPredicted RBP12.96□□□□□ -0.33
HLA-DMB-261ENST00000487996 FPGT-TNNI3KV9GXZ4 949 aa12.96□□□□□ -0.33
HLA-DMB-261ENST00000487996 AOX1Q06278 1338 aa12.96□□□□□ -0.33
HLA-DMB-261ENST00000487996 PDE8BO95263 885 aa12.96□□□□□ -0.34
HLA-DMB-261ENST00000487996 MX1P20591 662 aa12.96□□□□□ -0.34
HLA-DMB-261ENST00000487996 PUM3Q15397 648 aaKnown RBP12.96□□□□□ -0.34
HLA-DMB-261ENST00000487996 C2CD5Q86YS7 1000 aa12.96□□□□□ -0.34
HLA-DMB-261ENST00000487996 BCL11AQ9H165 835 aa12.96□□□□□ -0.34
HLA-DMB-261ENST00000487996 KIF13BQ9NQT8 1826 aa12.96□□□□□ -0.34
HLA-DMB-261ENST00000487996 PDE4AP27815 886 aa12.95□□□□□ -0.34
HLA-DMB-261ENST00000487996 CHRNDQ07001 517 aa12.95□□□□□ -0.34
HLA-DMB-261ENST00000487996 CNKSR1Q969H4 720 aa12.95□□□□□ -0.34
HLA-DMB-261ENST00000487996 SPON1Q9HCB6 807 aa12.95□□□□□ -0.34
HLA-DMB-261ENST00000487996 ZNF609O15014 1411 aa12.95□□□□□ -0.34
HLA-DMB-261ENST00000487996 TTC41PQ6P2S7 1318 aa12.94□□□□□ -0.34
HLA-DMB-261ENST00000487996 ERC2O15083 957 aa12.94□□□□□ -0.34
HLA-DMB-261ENST00000487996 TAF1P21675 1872 aa12.94□□□□□ -0.34
HLA-DMB-261ENST00000487996 TGFB2P61812 414 aa12.94□□□□□ -0.34
HLA-DMB-261ENST00000487996 ATP2B3Q16720 1220 aa12.94□□□□□ -0.34
HLA-DMB-261ENST00000487996 PLEKHM2Q8IWE5 1019 aa12.94□□□□□ -0.34
HLA-DMB-261ENST00000487996 VGLL2Q8N8G2 317 aa12.94□□□□□ -0.34
HLA-DMB-261ENST00000487996 EAF2Q96CJ1 260 aaPredicted RBP12.94□□□□□ -0.34
HLA-DMB-261ENST00000487996 OSBPL3Q9H4L5 887 aa12.94□□□□□ -0.34
HLA-DMB-261ENST00000487996 PPP1R1BQ9UD71 204 aaPredicted RBP12.94□□□□□ -0.34
HLA-DMB-261ENST00000487996 STAP2Q9UGK3 403 aa12.94□□□□□ -0.34
HLA-DMB-261ENST00000487996 MINPP1Q9UNW1 487 aa12.94□□□□□ -0.34
HLA-DMB-261ENST00000487996 COL11A2P13942 1736 aaPredicted RBP12.94□□□□□ -0.34
HLA-DMB-261ENST00000487996 A0A1B0GUL7 405 aa12.93□□□□□ -0.34
HLA-DMB-261ENST00000487996 SLC5A1P13866 664 aa12.93□□□□□ -0.34
HLA-DMB-261ENST00000487996 LPIN2Q92539 896 aa12.93□□□□□ -0.34
HLA-DMB-261ENST00000487996 ZNF622Q969S3 477 aaKnown RBP eCLIP12.93□□□□□ -0.34
HLA-DMB-261ENST00000487996 SGIP1Q9BQI5 828 aa12.93□□□□□ -0.34
HLA-DMB-261ENST00000487996 PPEF1O14829 653 aaPredicted RBP12.93□□□□□ -0.34
HLA-DMB-261ENST00000487996 IFIT1P09914 478 aaKnown RBP12.93□□□□□ -0.34
HLA-DMB-261ENST00000487996 PDE1AP54750 535 aa12.93□□□□□ -0.34
HLA-DMB-261ENST00000487996 UBE4AQ14139 1066 aa12.93□□□□□ -0.34
HLA-DMB-261ENST00000487996 C16orf71Q8IYS4 520 aaPredicted RBP12.93□□□□□ -0.34
HLA-DMB-261ENST00000487996 NEUROD6Q96NK8 337 aa12.93□□□□□ -0.34
HLA-DMB-261ENST00000487996 ECHDC1Q9NTX5 307 aa12.93□□□□□ -0.34
HLA-DMB-261ENST00000487996 CD2APQ9Y5K6 639 aa12.93□□□□□ -0.34
HLA-DMB-261ENST00000487996 XDHP47989 1333 aa12.92□□□□□ -0.34
HLA-DMB-261ENST00000487996 SALL3Q9BXA9 1300 aa12.92□□□□□ -0.34
HLA-DMB-261ENST00000487996 DLEC1Q9Y238 1755 aa12.92□□□□□ -0.34
HLA-DMB-261ENST00000487996 GLRX3O76003 335 aaKnown RBP12.92□□□□□ -0.34
HLA-DMB-261ENST00000487996 KCNJ4P48050 445 aa12.92□□□□□ -0.34
HLA-DMB-261ENST00000487996 GORABQ5T7V8 394 aa12.92□□□□□ -0.34
HLA-DMB-261ENST00000487996 PTGER2P43116 358 aa12.91□□□□□ -0.34
HLA-DMB-261ENST00000487996 GRIPAP1Q4V328 841 aa12.91□□□□□ -0.34
HLA-DMB-261ENST00000487996 BMP2KLQ5H9B9 411 aa12.91□□□□□ -0.34
HLA-DMB-261ENST00000487996 CCDC158Q5M9N0 1113 aa12.91□□□□□ -0.34
HLA-DMB-261ENST00000487996 SP8Q8IXZ3 490 aa12.91□□□□□ -0.34
HLA-DMB-261ENST00000487996 CCDC8Q9H0W5 538 aaPredicted RBP12.91□□□□□ -0.34
HLA-DMB-261ENST00000487996 ANKIB1Q9P2G1 1089 aa12.91□□□□□ -0.34
HLA-DMB-261ENST00000487996 DBNLQ9UJU6 430 aaKnown RBP12.91□□□□□ -0.34
HLA-DMB-261ENST00000487996 LEMD3Q9Y2U8 911 aa12.91□□□□□ -0.34
HLA-DMB-261ENST00000487996 ATP6V0A2Q9Y487 856 aa12.91□□□□□ -0.34
HLA-DMB-261ENST00000487996 A0A1B0GUL6 1792 aa12.91□□□□□ -0.34
HLA-DMB-261ENST00000487996 LRRC37AA6NMS7 1700 aa12.91□□□□□ -0.34
HLA-DMB-261ENST00000487996 FGFR2P21802 821 aa12.91□□□□□ -0.34
HLA-DMB-261ENST00000487996 TIMM10P62072 90 aa12.91□□□□□ -0.34
HLA-DMB-261ENST00000487996 CC2D2BQ6DHV5 1058 aa12.91□□□□□ -0.34
HLA-DMB-261ENST00000487996 SKAP1Q86WV1 359 aa12.91□□□□□ -0.34
HLA-DMB-261ENST00000487996 OTUD7AQ8TE49 926 aaPredicted RBP12.91□□□□□ -0.34
HLA-DMB-261ENST00000487996 ARAP2Q8WZ64 1704 aa12.9□□□□□ -0.34
HLA-DMB-261ENST00000487996 COL4A1P02462 1669 aa12.9□□□□□ -0.34
HLA-DMB-261ENST00000487996 CHRNA5P30532 468 aa12.9□□□□□ -0.34
HLA-DMB-261ENST00000487996 TTC22Q5TAA0 569 aa12.9□□□□□ -0.34
HLA-DMB-261ENST00000487996 PRPF40BQ6NWY9 871 aaKnown RBP12.9□□□□□ -0.34
HLA-DMB-261ENST00000487996 TTLL6Q8N841 843 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms