RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 FAM229AH3BQW9 127 aa9.39□□□□□ -0.91
CUL3-211ENST00000487558 APBA3O96018 575 aa9.39□□□□□ -0.91
CUL3-211ENST00000487558 P4HBP07237 508 aaKnown RBP9.39□□□□□ -0.91
CUL3-211ENST00000487558 VAMP1P23763 118 aa9.39□□□□□ -0.91
CUL3-211ENST00000487558 ZAP70P43403 619 aa9.39□□□□□ -0.91
CUL3-211ENST00000487558 DNM1Q05193 864 aaKnown RBP9.39□□□□□ -0.91
CUL3-211ENST00000487558 ATCAYQ86WG3 371 aa9.39□□□□□ -0.91
CUL3-211ENST00000487558 FAM129BQ96TA1 746 aa9.39□□□□□ -0.91
CUL3-211ENST00000487558 POLIQ9UNA4 740 aa9.39□□□□□ -0.91
CUL3-211ENST00000487558 FMR1Q06787 632 aaKnown RBP eCLIP9.38□□□□□ -0.91
CUL3-211ENST00000487558 TRIM28Q13263 835 aaKnown RBP9.38□□□□□ -0.91
CUL3-211ENST00000487558 DSC3Q14574 896 aa9.38□□□□□ -0.91
CUL3-211ENST00000487558 FAM26DQ5JW98 314 aa9.38□□□□□ -0.91
CUL3-211ENST00000487558 TREML1Q86YW5 311 aa9.38□□□□□ -0.91
CUL3-211ENST00000487558 TTC16Q8NEE8 873 aa9.38□□□□□ -0.91
CUL3-211ENST00000487558 EDEM1Q92611 657 aa9.38□□□□□ -0.91
CUL3-211ENST00000487558 TPSG1Q9NRR2 321 aa9.38□□□□□ -0.91
CUL3-211ENST00000487558 ITGAEP38570 1179 aa9.37□□□□□ -0.91
CUL3-211ENST00000487558 TAGLNQ01995 201 aaKnown RBP9.37□□□□□ -0.91
CUL3-211ENST00000487558 EHHADHQ08426 723 aa9.37□□□□□ -0.91
CUL3-211ENST00000487558 ALKBH8Q96BT7 664 aaKnown RBP9.37□□□□□ -0.91
CUL3-211ENST00000487558 PDGFAP04085 211 aa9.36□□□□□ -0.91
CUL3-211ENST00000487558 RPLP1P05386 114 aaKnown RBP9.36□□□□□ -0.91
CUL3-211ENST00000487558 MAPK8P45983 427 aa9.36□□□□□ -0.91
CUL3-211ENST00000487558 BTLAQ7Z6A9 289 aa9.36□□□□□ -0.91
CUL3-211ENST00000487558 GJD3Q8N144 294 aa9.36□□□□□ -0.91
CUL3-211ENST00000487558 GRIK4Q16099 956 aa9.35□□□□□ -0.91
CUL3-211ENST00000487558 BHMTQ93088 406 aa9.35□□□□□ -0.91
CUL3-211ENST00000487558 NACC1Q96RE7 527 aa9.35□□□□□ -0.91
CUL3-211ENST00000487558 IGSF5Q9NSI5 407 aa9.35□□□□□ -0.91
CUL3-211ENST00000487558 TGFBR3LH3BV60 316 aa9.34□□□□□ -0.91
CUL3-211ENST00000487558 MICAL2O94851 1124 aa9.34□□□□□ -0.91
CUL3-211ENST00000487558 IGHA2P01877 340 aa9.34□□□□□ -0.91
CUL3-211ENST00000487558 LDHBP07195 334 aaKnown RBP9.34□□□□□ -0.91
CUL3-211ENST00000487558 NEFLP07196 543 aa9.34□□□□□ -0.91
CUL3-211ENST00000487558 ATP2B2Q01814 1243 aa9.34□□□□□ -0.91
CUL3-211ENST00000487558 ZMYM1Q5SVZ6 1142 aa9.34□□□□□ -0.91
CUL3-211ENST00000487558 PIK3R5Q8WYR1 880 aa9.34□□□□□ -0.91
CUL3-211ENST00000487558 NIF3L1Q9GZT8 377 aa9.34□□□□□ -0.91
CUL3-211ENST00000487558 GPR182O15218 404 aa9.33□□□□□ -0.92
CUL3-211ENST00000487558 LILRB5O75023 590 aa9.33□□□□□ -0.92
CUL3-211ENST00000487558 PRPF40AO75400 957 aaKnown RBP9.33□□□□□ -0.92
CUL3-211ENST00000487558 XPCQ01831 940 aaPredicted RBP9.33□□□□□ -0.92
CUL3-211ENST00000487558 GPR152Q8TDT2 470 aa9.33□□□□□ -0.92
CUL3-211ENST00000487558 KRTAP4-8Q9BYQ9 185 aa9.33□□□□□ -0.92
CUL3-211ENST00000487558 EFCC1Q9HA90 598 aa9.33□□□□□ -0.92
CUL3-211ENST00000487558 BCS1LQ9Y276 419 aa9.33□□□□□ -0.92
CUL3-211ENST00000487558 DYRK3O43781 588 aa9.32□□□□□ -0.92
CUL3-211ENST00000487558 FOXD4L6Q3SYB3 417 aaPredicted RBP9.32□□□□□ -0.92
CUL3-211ENST00000487558 IER5Q5VY09 327 aa9.32□□□□□ -0.92
CUL3-211ENST00000487558 FOXD4L3Q6VB84 417 aaPredicted RBP9.32□□□□□ -0.92
CUL3-211ENST00000487558 NUDT16Q96DE0 195 aaKnown RBP9.32□□□□□ -0.92
CUL3-211ENST00000487558 SLC6A14Q9UN76 642 aa9.32□□□□□ -0.92
CUL3-211ENST00000487558 TCF3P15923 654 aa9.31□□□□□ -0.92
CUL3-211ENST00000487558 C8orf34Q49A92 452 aa9.31□□□□□ -0.92
CUL3-211ENST00000487558 TRAPPC3LQ5T215 181 aa9.31□□□□□ -0.92
CUL3-211ENST00000487558 ILDR2Q71H61 639 aa9.31□□□□□ -0.92
CUL3-211ENST00000487558 GSX2Q9BZM3 304 aa9.31□□□□□ -0.92
CUL3-211ENST00000487558 A0A0A0MRY4 1105 aa9.3□□□□□ -0.92
CUL3-211ENST00000487558 SELPP16109 830 aa9.3□□□□□ -0.92
CUL3-211ENST00000487558 ALG1LQ6GMV1 187 aa9.3□□□□□ -0.92
CUL3-211ENST00000487558 UBE2OQ9C0C9 1292 aaKnown RBP9.3□□□□□ -0.92
CUL3-211ENST00000487558 DMGDHQ9UI17 866 aaKnown RBP9.3□□□□□ -0.92
CUL3-211ENST00000487558 FNDC3AQ9Y2H6 1198 aaKnown RBP9.3□□□□□ -0.92
CUL3-211ENST00000487558 C9orf172C9J069 976 aa9.29□□□□□ -0.92
CUL3-211ENST00000487558 IDH3AP50213 366 aa9.29□□□□□ -0.92
CUL3-211ENST00000487558 ADGRE1Q14246 886 aa9.29□□□□□ -0.92
CUL3-211ENST00000487558 ENOX2Q16206 610 aaKnown RBP9.29□□□□□ -0.92
CUL3-211ENST00000487558 MRS2Q9HD23 443 aa9.29□□□□□ -0.92
CUL3-211ENST00000487558 PARP2Q9UGN5 583 aa9.29□□□□□ -0.92
CUL3-211ENST00000487558 PNMA6FA0A0J9YX94 578 aa9.28□□□□□ -0.92
CUL3-211ENST00000487558 OPLAHO14841 1288 aa9.28□□□□□ -0.92
CUL3-211ENST00000487558 ELNP15502 786 aa9.28□□□□□ -0.92
CUL3-211ENST00000487558 ARSDP51689 593 aa9.28□□□□□ -0.92
CUL3-211ENST00000487558 TBC1D8BQ0IIM8 1120 aa9.28□□□□□ -0.92
CUL3-211ENST00000487558 TSNAXIP1Q2TAA8 658 aa9.28□□□□□ -0.92
CUL3-211ENST00000487558 DUSP9Q99956 384 aaKnown RBP9.28□□□□□ -0.92
CUL3-211ENST00000487558 GGNBP2Q9H3C7 697 aa9.28□□□□□ -0.92
CUL3-211ENST00000487558 IGFLR1Q9H665 355 aa9.28□□□□□ -0.92
CUL3-211ENST00000487558 DNAJB12Q9NXW2 375 aaKnown RBP9.28□□□□□ -0.92
CUL3-211ENST00000487558 GRNP28799 593 aaKnown RBP9.27□□□□□ -0.93
CUL3-211ENST00000487558 AFF1P51825 1210 aaKnown RBP9.27□□□□□ -0.93
CUL3-211ENST00000487558 CCINQ13939 588 aa9.27□□□□□ -0.93
CUL3-211ENST00000487558 MBTPS1Q14703 1052 aa9.27□□□□□ -0.93
CUL3-211ENST00000487558 LENG1Q96BZ8 264 aaPredicted RBP9.27□□□□□ -0.93
CUL3-211ENST00000487558 CSRNP1Q96S65 589 aa9.27□□□□□ -0.93
CUL3-211ENST00000487558 DNAJC25Q9H1X3 360 aa9.27□□□□□ -0.93
CUL3-211ENST00000487558 JPH1Q9HDC5 661 aaPredicted RBP9.27□□□□□ -0.93
CUL3-211ENST00000487558 NAGPAQ9UK23 515 aa9.27□□□□□ -0.93
CUL3-211ENST00000487558 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.27□□□□□ -0.93
CUL3-211ENST00000487558 SORBS3O60504 671 aa9.26□□□□□ -0.93
CUL3-211ENST00000487558 RECKO95980 971 aa9.26□□□□□ -0.93
CUL3-211ENST00000487558 INPP5BP32019 993 aa9.26□□□□□ -0.93
CUL3-211ENST00000487558 PSMD2Q13200 908 aa9.26□□□□□ -0.93
CUL3-211ENST00000487558 MRPL58Q14197 206 aaKnown RBP9.26□□□□□ -0.93
CUL3-211ENST00000487558 TMC4Q7Z404 712 aa9.26□□□□□ -0.93
CUL3-211ENST00000487558 FBF1Q8TES7 1133 aa9.26□□□□□ -0.93
CUL3-211ENST00000487558 NUDT8Q8WV74 236 aa9.26□□□□□ -0.93
CUL3-211ENST00000487558 WWC3Q9ULE0 1092 aa9.26□□□□□ -0.93
CUL3-211ENST00000487558 EPB42P16452 691 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms