RNA–Protein interactions for RNA: ENST00000487507.1

SGIP1-212, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-212ENST00000487507 PTPN22Q9Y2R2 807 aa16.55■□□□□ 0.24
SGIP1-212ENST00000487507 UTP14AQ9BVJ6 771 aaKnown RBP16.54■□□□□ 0.24
SGIP1-212ENST00000487507 NSFL1CQ9UNZ2 370 aaKnown RBP16.54■□□□□ 0.24
SGIP1-212ENST00000487507 GRAPQ13588 217 aa16.53■□□□□ 0.24
SGIP1-212ENST00000487507 GRAPLQ8TC17 118 aaPredicted RBP16.53■□□□□ 0.24
SGIP1-212ENST00000487507 RTF1Q92541 710 aaKnown RBP16.53■□□□□ 0.24
SGIP1-212ENST00000487507 DLG5Q8TDM6 1919 aa16.53■□□□□ 0.24
SGIP1-212ENST00000487507 PRKAR2BP31323 418 aa16.52■□□□□ 0.24
SGIP1-212ENST00000487507 COL3A1P02461 1466 aaPredicted RBP16.52■□□□□ 0.23
SGIP1-212ENST00000487507 COL4A1P02462 1669 aa16.52■□□□□ 0.23
SGIP1-212ENST00000487507 TCIRG1Q13488 830 aa16.51■□□□□ 0.23
SGIP1-212ENST00000487507 SLC4A8Q2Y0W8 1093 aa16.51■□□□□ 0.23
SGIP1-212ENST00000487507 PARP10Q53GL7 1025 aa16.51■□□□□ 0.23
SGIP1-212ENST00000487507 GIGYF2Q6Y7W6 1299 aaKnown RBP16.51■□□□□ 0.23
SGIP1-212ENST00000487507 ARMC5Q96C12 935 aa16.51■□□□□ 0.23
SGIP1-212ENST00000487507 CFHR5Q9BXR6 569 aa16.51■□□□□ 0.23
SGIP1-212ENST00000487507 POLLQ9UGP5 575 aa16.51■□□□□ 0.23
SGIP1-212ENST00000487507 G3V3G9 751 aa16.5■□□□□ 0.23
SGIP1-212ENST00000487507 PTPN12Q05209 780 aaKnown RBP16.5■□□□□ 0.23
SGIP1-212ENST00000487507 AMER1Q5JTC6 1135 aaPredicted RBP16.5■□□□□ 0.23
SGIP1-212ENST00000487507 SLC10A5Q5PT55 438 aa16.5■□□□□ 0.23
SGIP1-212ENST00000487507 DCAF8Q5TAQ9 597 aa16.5■□□□□ 0.23
SGIP1-212ENST00000487507 ZNF609O15014 1411 aa16.5■□□□□ 0.23
SGIP1-212ENST00000487507 ZSWIM8A7E2V4 1837 aa16.49■□□□□ 0.23
SGIP1-212ENST00000487507 LAMB1P07942 1786 aa16.49■□□□□ 0.23
SGIP1-212ENST00000487507 VIL1P09327 827 aaKnown RBP16.49■□□□□ 0.23
SGIP1-212ENST00000487507 GPSM2P81274 684 aa16.49■□□□□ 0.23
SGIP1-212ENST00000487507 CC2D1BQ5T0F9 858 aaKnown RBP16.49■□□□□ 0.23
SGIP1-212ENST00000487507 ERO1AQ96HE7 468 aa16.49■□□□□ 0.23
SGIP1-212ENST00000487507 THUMPD2Q9BTF0 503 aaKnown RBP16.49■□□□□ 0.23
SGIP1-212ENST00000487507 EFCC1Q9HA90 598 aa16.49■□□□□ 0.23
SGIP1-212ENST00000487507 ALDH1A1P00352 501 aa16.48■□□□□ 0.23
SGIP1-212ENST00000487507 MNX1P50219 401 aaPredicted RBP16.48■□□□□ 0.23
SGIP1-212ENST00000487507 DPF3Q92784 378 aa16.48■□□□□ 0.23
SGIP1-212ENST00000487507 MYOZ2Q9NPC6 264 aa16.48■□□□□ 0.23
SGIP1-212ENST00000487507 FZD1Q9UP38 647 aa16.48■□□□□ 0.23
SGIP1-212ENST00000487507 RANBP2P49792 3224 aaKnown RBP16.47■□□□□ 0.23
SGIP1-212ENST00000487507 NF2P35240 595 aa16.47■□□□□ 0.23
SGIP1-212ENST00000487507 CAP1Q01518 475 aa16.47■□□□□ 0.23
SGIP1-212ENST00000487507 SPRYD7Q5W111 196 aa16.47■□□□□ 0.23
SGIP1-212ENST00000487507 IFNL1Q8IU54 200 aa16.47■□□□□ 0.23
SGIP1-212ENST00000487507 ZNF333Q96JL9 665 aa16.47■□□□□ 0.23
SGIP1-212ENST00000487507 EYA3Q99504 573 aa16.47■□□□□ 0.23
SGIP1-212ENST00000487507 PITPNM2Q9BZ72 1349 aa16.46■□□□□ 0.23
SGIP1-212ENST00000487507 ZNF280AP59817 542 aaPredicted RBP16.46■□□□□ 0.23
SGIP1-212ENST00000487507 SLC9C1Q4G0N8 1177 aa16.46■□□□□ 0.23
SGIP1-212ENST00000487507 CELF1Q92879 486 aaKnown RBP16.46■□□□□ 0.23
SGIP1-212ENST00000487507 WTIPA6NIX2 430 aaPredicted RBP16.45■□□□□ 0.22
SGIP1-212ENST00000487507 IGF2BP3O00425 579 aaKnown RBP eCLIP16.45■□□□□ 0.22
SGIP1-212ENST00000487507 TAF7Q15545 349 aaPredicted RBP16.45■□□□□ 0.22
SGIP1-212ENST00000487507 NBPF9Q3BBW0 867 aa16.45■□□□□ 0.22
SGIP1-212ENST00000487507 RSBN1LQ6PCB5 846 aaPredicted RBP16.45■□□□□ 0.22
SGIP1-212ENST00000487507 TRMT112Q9UI30 125 aaKnown RBP16.45■□□□□ 0.22
SGIP1-212ENST00000487507 USP17L8P0C7I0 530 aa16.44■□□□□ 0.22
SGIP1-212ENST00000487507 HSPA5P11021 654 aaKnown RBP16.44■□□□□ 0.22
SGIP1-212ENST00000487507 ARMC9Q7Z3E5 817 aa16.44■□□□□ 0.22
SGIP1-212ENST00000487507 TMC4Q7Z404 712 aa16.44■□□□□ 0.22
SGIP1-212ENST00000487507 TBC1D16Q8TBP0 767 aa16.44■□□□□ 0.22
SGIP1-212ENST00000487507 LRCH3Q96II8 777 aa16.44■□□□□ 0.22
SGIP1-212ENST00000487507 ZC3H12CQ9C0D7 883 aaKnown RBP16.44■□□□□ 0.22
SGIP1-212ENST00000487507 RSPH6AQ9H0K4 717 aa16.44■□□□□ 0.22
SGIP1-212ENST00000487507 ANGEL1Q9UNK9 670 aaKnown RBP16.44■□□□□ 0.22
SGIP1-212ENST00000487507 PTCH2Q9Y6C5 1203 aa16.44■□□□□ 0.22
SGIP1-212ENST00000487507 MANSC4A6NHS7 340 aaPredicted RBP16.43■□□□□ 0.22
SGIP1-212ENST00000487507 SOX1O00570 391 aaPredicted RBP16.43■□□□□ 0.22
SGIP1-212ENST00000487507 ANXA1P04083 346 aa16.43■□□□□ 0.22
SGIP1-212ENST00000487507 CRHR2Q13324 411 aa16.43■□□□□ 0.22
SGIP1-212ENST00000487507 ZNF646O15015 1829 aaPredicted RBP16.42■□□□□ 0.22
SGIP1-212ENST00000487507 NBPF11Q86T75 865 aa16.42■□□□□ 0.22
SGIP1-212ENST00000487507 NLRP10Q86W26 655 aa16.42■□□□□ 0.22
SGIP1-212ENST00000487507 AGBL3Q8NEM8 1001 aa16.42■□□□□ 0.22
SGIP1-212ENST00000487507 SPEF2Q9C093 1822 aa16.42■□□□□ 0.22
SGIP1-212ENST00000487507 SP3Q02447 781 aa16.41■□□□□ 0.22
SGIP1-212ENST00000487507 SH3TC2Q8TF17 1288 aa16.41■□□□□ 0.22
SGIP1-212ENST00000487507 SH3TC1Q8TE82 1336 aa16.41■□□□□ 0.22
SGIP1-212ENST00000487507 UFL1O94874 794 aa16.4■□□□□ 0.22
SGIP1-212ENST00000487507 AIMP1Q12904 312 aaKnown RBP16.4■□□□□ 0.22
SGIP1-212ENST00000487507 SLC10A4Q96EP9 437 aa16.4■□□□□ 0.22
SGIP1-212ENST00000487507 CLMNQ96JQ2 1002 aa16.4■□□□□ 0.22
SGIP1-212ENST00000487507 COL25A1Q9BXS0 654 aaPredicted RBP16.4■□□□□ 0.22
SGIP1-212ENST00000487507 SASH1O94885 1247 aa16.39■□□□□ 0.21
SGIP1-212ENST00000487507 EIF2S2P20042 333 aaKnown RBP16.39■□□□□ 0.21
SGIP1-212ENST00000487507 INHBEP58166 350 aa16.39■□□□□ 0.21
SGIP1-212ENST00000487507 EIF4G2P78344 907 aaKnown RBP eCLIP16.39■□□□□ 0.21
SGIP1-212ENST00000487507 FBXW7Q969H0 707 aa16.39■□□□□ 0.21
SGIP1-212ENST00000487507 MXD3Q9BW11 206 aa16.39■□□□□ 0.21
SGIP1-212ENST00000487507 ANKIB1Q9P2G1 1089 aa16.39■□□□□ 0.21
SGIP1-212ENST00000487507 OTOFQ9HC10 1997 aa16.38■□□□□ 0.21
SGIP1-212ENST00000487507 ECM29Q5VYK3 1845 aa16.38■□□□□ 0.21
SGIP1-212ENST00000487507 UNC80Q8N2C7 3258 aa16.38■□□□□ 0.21
SGIP1-212ENST00000487507 EIF4A1P60842 406 aaKnown RBP16.38■□□□□ 0.21
SGIP1-212ENST00000487507 PROSER3Q2NL68 480 aa16.38■□□□□ 0.21
SGIP1-212ENST00000487507 RTL5Q5HYW3 569 aaPredicted RBP16.38■□□□□ 0.21
SGIP1-212ENST00000487507 LDLRAD1Q5T700 205 aa16.38■□□□□ 0.21
SGIP1-212ENST00000487507 WNK4Q96J92 1243 aa16.38■□□□□ 0.21
SGIP1-212ENST00000487507 GMLQ99445 158 aa16.38■□□□□ 0.21
SGIP1-212ENST00000487507 ECM2O94769 699 aaPredicted RBP16.37■□□□□ 0.21
SGIP1-212ENST00000487507 WNT10BO00744 389 aa16.36■□□□□ 0.21
SGIP1-212ENST00000487507 NECTIN2Q92692 538 aa16.36■□□□□ 0.21
SGIP1-212ENST00000487507 PRO3102Q9H379 93 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms