RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 GDF10P55107 478 aa7.64□□□□□ -1.19
R3HDM1-218ENST00000487294 FOXR1Q6PIV2 292 aa7.64□□□□□ -1.19
R3HDM1-218ENST00000487294 ZNF837Q96EG3 531 aaPredicted RBP7.64□□□□□ -1.19
R3HDM1-218ENST00000487294 NOD1Q9Y239 953 aa7.64□□□□□ -1.19
R3HDM1-218ENST00000487294 FMN2Q9NZ56 1722 aa7.64□□□□□ -1.19
R3HDM1-218ENST00000487294 IFT172Q9UG01 1749 aa7.64□□□□□ -1.19
R3HDM1-218ENST00000487294 USP32Q8NFA0 1604 aa7.63□□□□□ -1.19
R3HDM1-218ENST00000487294 ADGRF5Q8IZF2 1346 aa7.63□□□□□ -1.19
R3HDM1-218ENST00000487294 TMEM229AB2RXF0 380 aa7.63□□□□□ -1.19
R3HDM1-218ENST00000487294 INHAP05111 366 aa7.63□□□□□ -1.19
R3HDM1-218ENST00000487294 NBPF10Q6P3W6 841 aaKnown RBP7.63□□□□□ -1.19
R3HDM1-218ENST00000487294 PLEKHM2Q8IWE5 1019 aa7.63□□□□□ -1.19
R3HDM1-218ENST00000487294 NBPF15Q8N660 670 aa7.63□□□□□ -1.19
R3HDM1-218ENST00000487294 CALR3Q96L12 384 aaKnown RBP7.63□□□□□ -1.19
R3HDM1-218ENST00000487294 NWD2Q9ULI1 1742 aa7.63□□□□□ -1.19
R3HDM1-218ENST00000487294 SBNO1A3KN83 1393 aa7.62□□□□□ -1.19
R3HDM1-218ENST00000487294 USP17L3A6NCW0 530 aa7.62□□□□□ -1.19
R3HDM1-218ENST00000487294 USP17L4A6NCW7 530 aa7.62□□□□□ -1.19
R3HDM1-218ENST00000487294 PHF20L1A8MW92 1017 aa7.62□□□□□ -1.19
R3HDM1-218ENST00000487294 GTF2IP78347 998 aa7.62□□□□□ -1.19
R3HDM1-218ENST00000487294 VPS72Q15906 364 aa7.62□□□□□ -1.19
R3HDM1-218ENST00000487294 USP17L2Q6R6M4 530 aa7.62□□□□□ -1.19
R3HDM1-218ENST00000487294 USP17L1Q7RTZ2 530 aa7.62□□□□□ -1.19
R3HDM1-218ENST00000487294 ZSCAN10Q96SZ4 725 aaPredicted RBP7.62□□□□□ -1.19
R3HDM1-218ENST00000487294 TFIP11Q9UBB9 837 aaKnown RBP7.62□□□□□ -1.19
R3HDM1-218ENST00000487294 LRP5O75197 1615 aa7.62□□□□□ -1.19
R3HDM1-218ENST00000487294 NRXN1Q9ULB1 1477 aa7.62□□□□□ -1.19
R3HDM1-218ENST00000487294 TNS3Q68CZ2 1445 aa7.61□□□□□ -1.19
R3HDM1-218ENST00000487294 YTHDC2Q9H6S0 1430 aaKnown RBP7.61□□□□□ -1.19
R3HDM1-218ENST00000487294 PLEKHH1Q9ULM0 1364 aa7.61□□□□□ -1.19
R3HDM1-218ENST00000487294 ACIN1Q9UKV3 1341 aaKnown RBP7.61□□□□□ -1.19
R3HDM1-218ENST00000487294 WASLO00401 505 aaPredicted RBP7.61□□□□□ -1.19
R3HDM1-218ENST00000487294 WDR44Q5JSH3 913 aa7.61□□□□□ -1.19
R3HDM1-218ENST00000487294 TAS1R3Q7RTX0 852 aa7.61□□□□□ -1.19
R3HDM1-218ENST00000487294 WAPLQ7Z5K2 1190 aa7.61□□□□□ -1.19
R3HDM1-218ENST00000487294 C14orf93Q9H972 538 aaKnown RBP7.61□□□□□ -1.19
R3HDM1-218ENST00000487294 DYRK1BQ9Y463 629 aa7.61□□□□□ -1.19
R3HDM1-218ENST00000487294 ARHGEF10O15013 1369 aa7.6□□□□□ -1.19
R3HDM1-218ENST00000487294 BRWD3Q6RI45 1802 aa7.6□□□□□ -1.19
R3HDM1-218ENST00000487294 PALM3A6NDB9 673 aaPredicted RBP7.6□□□□□ -1.19
R3HDM1-218ENST00000487294 H7C1W4 665 aa7.6□□□□□ -1.19
R3HDM1-218ENST00000487294 ZBTB7BO15156 539 aaPredicted RBP7.6□□□□□ -1.19
R3HDM1-218ENST00000487294 XPCQ01831 940 aaPredicted RBP7.6□□□□□ -1.19
R3HDM1-218ENST00000487294 TLR1Q15399 786 aa7.6□□□□□ -1.19
R3HDM1-218ENST00000487294 KRT28Q7Z3Y7 464 aa7.6□□□□□ -1.19
R3HDM1-218ENST00000487294 ZMYND15Q9H091 742 aa7.6□□□□□ -1.19
R3HDM1-218ENST00000487294 SERTAD1Q9UHV2 236 aa7.6□□□□□ -1.19
R3HDM1-218ENST00000487294 PHKA2P46019 1235 aa7.59□□□□□ -1.19
R3HDM1-218ENST00000487294 SMTNP53814 917 aa7.59□□□□□ -1.19
R3HDM1-218ENST00000487294 PSME1Q06323 249 aa7.59□□□□□ -1.19
R3HDM1-218ENST00000487294 C4orf17Q53FE4 359 aa7.59□□□□□ -1.19
R3HDM1-218ENST00000487294 TMEM214Q6NUQ4 689 aaKnown RBP7.59□□□□□ -1.19
R3HDM1-218ENST00000487294 PODNQ7Z5L7 613 aa7.59□□□□□ -1.19
R3HDM1-218ENST00000487294 PPARGC1BQ86YN6 1023 aaKnown RBP7.59□□□□□ -1.19
R3HDM1-218ENST00000487294 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.59□□□□□ -1.19
R3HDM1-218ENST00000487294 SLC4A9Q96Q91 983 aa7.59□□□□□ -1.19
R3HDM1-218ENST00000487294 PPP1R12CQ9BZL4 782 aa7.59□□□□□ -1.19
R3HDM1-218ENST00000487294 TIMMDC1Q9NPL8 285 aa7.59□□□□□ -1.19
R3HDM1-218ENST00000487294 LRRC4BQ9NT99 713 aa7.59□□□□□ -1.19
R3HDM1-218ENST00000487294 MKRN1Q9UHC7 482 aaKnown RBP7.59□□□□□ -1.19
R3HDM1-218ENST00000487294 KIAA1024Q9UPX6 916 aa7.59□□□□□ -1.19
R3HDM1-218ENST00000487294 ANKARQ7Z5J8 1434 aa7.59□□□□□ -1.19
R3HDM1-218ENST00000487294 ABCA3Q99758 1704 aa7.58□□□□□ -1.2
R3HDM1-218ENST00000487294 DLC1Q96QB1 1528 aa7.58□□□□□ -1.2
R3HDM1-218ENST00000487294 PLCH1Q4KWH8 1693 aa7.58□□□□□ -1.2
R3HDM1-218ENST00000487294 BCRP11274 1271 aa7.58□□□□□ -1.2
R3HDM1-218ENST00000487294 CLDN10P78369 228 aa7.58□□□□□ -1.2
R3HDM1-218ENST00000487294 TMEM132EQ6IEE7 984 aa7.58□□□□□ -1.2
R3HDM1-218ENST00000487294 RIPOR1Q6ZS17 1223 aa7.58□□□□□ -1.2
R3HDM1-218ENST00000487294 KRT27Q7Z3Y8 459 aa7.58□□□□□ -1.2
R3HDM1-218ENST00000487294 DEFB132Q7Z7B7 95 aa7.58□□□□□ -1.2
R3HDM1-218ENST00000487294 TRIM50Q86XT4 487 aa7.58□□□□□ -1.2
R3HDM1-218ENST00000487294 RHBDD1Q8TEB9 315 aa7.58□□□□□ -1.2
R3HDM1-218ENST00000487294 TRERF1Q96PN7 1200 aa7.58□□□□□ -1.2
R3HDM1-218ENST00000487294 GAS2L1Q99501 681 aaPredicted RBP7.58□□□□□ -1.2
R3HDM1-218ENST00000487294 STK26Q9P289 416 aa7.58□□□□□ -1.2
R3HDM1-218ENST00000487294 MAFBQ9Y5Q3 323 aaPredicted RBP7.58□□□□□ -1.2
R3HDM1-218ENST00000487294 DISP2A7MBM2 1401 aa7.58□□□□□ -1.2
R3HDM1-218ENST00000487294 ADGRB2O60241 1585 aa7.58□□□□□ -1.2
R3HDM1-218ENST00000487294 GPR25O00155 361 aa7.57□□□□□ -1.2
R3HDM1-218ENST00000487294 SF3B2Q13435 895 aaKnown RBP7.57□□□□□ -1.2
R3HDM1-218ENST00000487294 MTFR1Q15390 333 aa7.57□□□□□ -1.2
R3HDM1-218ENST00000487294 DBN1Q16643 649 aa7.57□□□□□ -1.2
R3HDM1-218ENST00000487294 GNASQ5JWF2 1037 aa7.57□□□□□ -1.2
R3HDM1-218ENST00000487294 MPHOSPH9Q99550 1183 aa7.57□□□□□ -1.2
R3HDM1-218ENST00000487294 ZNF358Q9NW07 568 aa7.57□□□□□ -1.2
R3HDM1-218ENST00000487294 NSFL1CQ9UNZ2 370 aaKnown RBP7.57□□□□□ -1.2
R3HDM1-218ENST00000487294 NRAPQ86VF7 1730 aa7.57□□□□□ -1.2
R3HDM1-218ENST00000487294 DHX57Q6P158 1386 aaKnown RBP7.57□□□□□ -1.2
R3HDM1-218ENST00000487294 RGPD8O14715 1765 aaPredicted RBP7.56□□□□□ -1.2
R3HDM1-218ENST00000487294 TRPM3Q9HCF6 1732 aaPredicted RBP7.56□□□□□ -1.2
R3HDM1-218ENST00000487294 FAM83GA6ND36 823 aa7.56□□□□□ -1.2
R3HDM1-218ENST00000487294 A6NJY4 79 aa7.56□□□□□ -1.2
R3HDM1-218ENST00000487294 GTF2E1P29083 439 aaPredicted RBP7.56□□□□□ -1.2
R3HDM1-218ENST00000487294 ATP1A2P50993 1020 aa7.56□□□□□ -1.2
R3HDM1-218ENST00000487294 RGL3Q3MIN7 710 aa7.56□□□□□ -1.2
R3HDM1-218ENST00000487294 OGFOD1Q8N543 542 aa7.56□□□□□ -1.2
R3HDM1-218ENST00000487294 BEND7Q8N7W2 519 aaPredicted RBP7.56□□□□□ -1.2
R3HDM1-218ENST00000487294 NEDD1Q8NHV4 660 aa7.56□□□□□ -1.2
R3HDM1-218ENST00000487294 GTPBP3Q969Y2 492 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms