RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 RIC1Q4ADV7 1423 aa7.47□□□□□ -1.21
VAMP3-203ENST00000487194 PDE8BO95263 885 aa7.47□□□□□ -1.21
VAMP3-203ENST00000487194 GYS1P13807 737 aa7.47□□□□□ -1.21
VAMP3-203ENST00000487194 MCCP23508 829 aa7.47□□□□□ -1.21
VAMP3-203ENST00000487194 TIMM10P62072 90 aa7.47□□□□□ -1.21
VAMP3-203ENST00000487194 NFIXQ14938 502 aa7.47□□□□□ -1.21
VAMP3-203ENST00000487194 PUM3Q15397 648 aaKnown RBP7.47□□□□□ -1.21
VAMP3-203ENST00000487194 ATP2B3Q16720 1220 aa7.47□□□□□ -1.21
VAMP3-203ENST00000487194 LRRFIP1Q32MZ4 808 aaKnown RBP7.47□□□□□ -1.21
VAMP3-203ENST00000487194 SMIM5Q71RC9 77 aa7.47□□□□□ -1.21
VAMP3-203ENST00000487194 AMIGO3Q86WK7 504 aa7.47□□□□□ -1.21
VAMP3-203ENST00000487194 ANKRD18AQ8IVF6 992 aa7.47□□□□□ -1.21
VAMP3-203ENST00000487194 CNBD1Q8NA66 436 aa7.47□□□□□ -1.21
VAMP3-203ENST00000487194 AKT1S1Q96B36 256 aa7.47□□□□□ -1.21
VAMP3-203ENST00000487194 HAUS7Q99871 368 aa7.47□□□□□ -1.21
VAMP3-203ENST00000487194 BOLA2Q9H3K6 86 aa7.47□□□□□ -1.21
VAMP3-203ENST00000487194 DIAPH3Q9NSV4 1193 aa7.47□□□□□ -1.21
VAMP3-203ENST00000487194 LRP5O75197 1615 aa7.47□□□□□ -1.21
VAMP3-203ENST00000487194 RAD50Q92878 1312 aa7.47□□□□□ -1.21
VAMP3-203ENST00000487194 AK9Q5TCS8 1911 aa7.46□□□□□ -1.21
VAMP3-203ENST00000487194 MAP4K4O95819 1239 aaPredicted RBP7.46□□□□□ -1.22
VAMP3-203ENST00000487194 IFIT1P09914 478 aaKnown RBP7.46□□□□□ -1.22
VAMP3-203ENST00000487194 SLC5A1P13866 664 aa7.46□□□□□ -1.22
VAMP3-203ENST00000487194 TM4SF1P30408 202 aa7.46□□□□□ -1.22
VAMP3-203ENST00000487194 ST5P78524 1137 aa7.46□□□□□ -1.22
VAMP3-203ENST00000487194 SF3B2Q13435 895 aaKnown RBP7.46□□□□□ -1.22
VAMP3-203ENST00000487194 TTC39AQ5SRH9 613 aa7.46□□□□□ -1.22
VAMP3-203ENST00000487194 NLGN1Q8N2Q7 840 aa7.46□□□□□ -1.22
VAMP3-203ENST00000487194 VGLL2Q8N8G2 317 aa7.46□□□□□ -1.22
VAMP3-203ENST00000487194 IL27Q8NEV9 243 aa7.46□□□□□ -1.22
VAMP3-203ENST00000487194 LPIN2Q92539 896 aa7.46□□□□□ -1.22
VAMP3-203ENST00000487194 XAGE2Q96GT9 111 aa7.46□□□□□ -1.22
VAMP3-203ENST00000487194 ZNF512BQ96KM6 892 aaPredicted RBP7.46□□□□□ -1.22
VAMP3-203ENST00000487194 FSD1Q9BTV5 496 aa7.46□□□□□ -1.22
VAMP3-203ENST00000487194 USP26Q9BXU7 913 aa7.46□□□□□ -1.22
VAMP3-203ENST00000487194 SEC31BQ9NQW1 1179 aa7.46□□□□□ -1.22
VAMP3-203ENST00000487194 BSDC1Q9NW68 430 aaPredicted RBP7.46□□□□□ -1.22
VAMP3-203ENST00000487194 TNS1Q9HBL0 1735 aaKnown RBP7.46□□□□□ -1.22
VAMP3-203ENST00000487194 EP400Q96L91 3159 aa7.45□□□□□ -1.22
VAMP3-203ENST00000487194 SGSM2O43147 1006 aa7.45□□□□□ -1.22
VAMP3-203ENST00000487194 SERPINB2P05120 415 aa7.45□□□□□ -1.22
VAMP3-203ENST00000487194 UQCRFS1P1P0C7P4 283 aa7.45□□□□□ -1.22
VAMP3-203ENST00000487194 FGFR2P21802 821 aa7.45□□□□□ -1.22
VAMP3-203ENST00000487194 KIAA1211Q6ZU35 1233 aa7.45□□□□□ -1.22
VAMP3-203ENST00000487194 DDX46Q7L014 1031 aaKnown RBP7.45□□□□□ -1.22
VAMP3-203ENST00000487194 DNAJC2Q99543 621 aaKnown RBP7.45□□□□□ -1.22
VAMP3-203ENST00000487194 ANO2Q9NQ90 1003 aa7.45□□□□□ -1.22
VAMP3-203ENST00000487194 PAG1Q9NWQ8 432 aa7.45□□□□□ -1.22
VAMP3-203ENST00000487194 SPEF2Q9C093 1822 aa7.45□□□□□ -1.22
VAMP3-203ENST00000487194 MSH5O43196 834 aa7.44□□□□□ -1.22
VAMP3-203ENST00000487194 BAG6P46379 1132 aa7.44□□□□□ -1.22
VAMP3-203ENST00000487194 ANAPC15P60006 121 aa7.44□□□□□ -1.22
VAMP3-203ENST00000487194 RPS8P62241 208 aaKnown RBP7.44□□□□□ -1.22
VAMP3-203ENST00000487194 CHRNDQ07001 517 aa7.44□□□□□ -1.22
VAMP3-203ENST00000487194 RABEP1Q15276 862 aa7.44□□□□□ -1.22
VAMP3-203ENST00000487194 ZNF827Q17R98 1081 aa7.44□□□□□ -1.22
VAMP3-203ENST00000487194 PRR5LQ6MZQ0 368 aa7.44□□□□□ -1.22
VAMP3-203ENST00000487194 CWC27Q6UX04 472 aaKnown RBP7.44□□□□□ -1.22
VAMP3-203ENST00000487194 C3orf67Q6ZVT6 689 aa7.44□□□□□ -1.22
VAMP3-203ENST00000487194 KBTBD3Q8NAB2 608 aa7.44□□□□□ -1.22
VAMP3-203ENST00000487194 CAMKK2Q96RR4 588 aa7.44□□□□□ -1.22
VAMP3-203ENST00000487194 ANKRD2Q9GZV1 360 aa7.44□□□□□ -1.22
VAMP3-203ENST00000487194 SNRKQ9NRH2 765 aa7.44□□□□□ -1.22
VAMP3-203ENST00000487194 STK32BQ9NY57 414 aa7.44□□□□□ -1.22
VAMP3-203ENST00000487194 POLRMTO00411 1230 aaKnown RBP7.43□□□□□ -1.22
VAMP3-203ENST00000487194 GOLIM4O00461 696 aa7.43□□□□□ -1.22
VAMP3-203ENST00000487194 ZFYP08048 801 aaPredicted RBP7.43□□□□□ -1.22
VAMP3-203ENST00000487194 ARID4AP29374 1257 aaPredicted RBP7.43□□□□□ -1.22
VAMP3-203ENST00000487194 ADORA1P30542 326 aa7.43□□□□□ -1.22
VAMP3-203ENST00000487194 NMIQ13287 307 aaPredicted RBP7.43□□□□□ -1.22
VAMP3-203ENST00000487194 GRAPQ13588 217 aa7.43□□□□□ -1.22
VAMP3-203ENST00000487194 UBE4AQ14139 1066 aa7.43□□□□□ -1.22
VAMP3-203ENST00000487194 TTF1Q15361 905 aaPredicted RBP7.43□□□□□ -1.22
VAMP3-203ENST00000487194 CCDC102BQ68D86 513 aa7.43□□□□□ -1.22
VAMP3-203ENST00000487194 ZSCAN25Q6NSZ9 544 aa7.43□□□□□ -1.22
VAMP3-203ENST00000487194 ERICH6Q7L0X2 663 aa7.43□□□□□ -1.22
VAMP3-203ENST00000487194 COL23A1Q86Y22 540 aaPredicted RBP7.43□□□□□ -1.22
VAMP3-203ENST00000487194 CCDC125Q86Z20 511 aa7.43□□□□□ -1.22
VAMP3-203ENST00000487194 GRAPLQ8TC17 118 aaPredicted RBP7.43□□□□□ -1.22
VAMP3-203ENST00000487194 RPGRQ92834 1020 aaKnown RBP7.43□□□□□ -1.22
VAMP3-203ENST00000487194 SNX21Q969T3 373 aa7.43□□□□□ -1.22
VAMP3-203ENST00000487194 RBM17Q96I25 401 aaKnown RBP7.43□□□□□ -1.22
VAMP3-203ENST00000487194 KLRG2A4D1S0 409 aaPredicted RBP7.42□□□□□ -1.22
VAMP3-203ENST00000487194 TAF5LO75529 589 aa7.42□□□□□ -1.22
VAMP3-203ENST00000487194 KCNJ4P48050 445 aa7.42□□□□□ -1.22
VAMP3-203ENST00000487194 FKBP4Q02790 459 aaKnown RBP eCLIP7.42□□□□□ -1.22
VAMP3-203ENST00000487194 EN1Q05925 392 aaPredicted RBP7.42□□□□□ -1.22
VAMP3-203ENST00000487194 DDR1Q08345 913 aa7.42□□□□□ -1.22
VAMP3-203ENST00000487194 EZH2Q15910 746 aaKnown RBP7.42□□□□□ -1.22
VAMP3-203ENST00000487194 SLC15A2Q16348 729 aa7.42□□□□□ -1.22
VAMP3-203ENST00000487194 CRY2Q49AN0 593 aa7.42□□□□□ -1.22
VAMP3-203ENST00000487194 MCMDC2Q4G0Z9 681 aa7.42□□□□□ -1.22
VAMP3-203ENST00000487194 TMC4Q7Z404 712 aa7.42□□□□□ -1.22
VAMP3-203ENST00000487194 HSCBQ8IWL3 235 aa7.42□□□□□ -1.22
VAMP3-203ENST00000487194 HELBQ8NG08 1087 aaPredicted RBP7.42□□□□□ -1.22
VAMP3-203ENST00000487194 CELF1Q92879 486 aaKnown RBP7.42□□□□□ -1.22
VAMP3-203ENST00000487194 IL17RAQ96F46 866 aa7.42□□□□□ -1.22
VAMP3-203ENST00000487194 BRIP1Q9BX63 1249 aa7.42□□□□□ -1.22
VAMP3-203ENST00000487194 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.42□□□□□ -1.22
VAMP3-203ENST00000487194 LSG1Q9H089 658 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms