RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 WEE1P30291 646 aa7.23□□□□□ -1.25
SNRNP27-204ENST00000487029 LCE1DQ5T752 114 aa7.23□□□□□ -1.25
SNRNP27-204ENST00000487029 MYO19Q96H55 970 aa7.23□□□□□ -1.25
SNRNP27-204ENST00000487029 GHRHP01286 108 aa7.22□□□□□ -1.25
SNRNP27-204ENST00000487029 PSAPP07602 524 aa7.22□□□□□ -1.25
SNRNP27-204ENST00000487029 SPINK2P20155 84 aa7.22□□□□□ -1.25
SNRNP27-204ENST00000487029 ARID4AP29374 1257 aaPredicted RBP7.22□□□□□ -1.25
SNRNP27-204ENST00000487029 ADAMTSL4Q6UY14 1074 aa7.22□□□□□ -1.25
SNRNP27-204ENST00000487029 ANKMY2Q8IV38 441 aa7.22□□□□□ -1.25
SNRNP27-204ENST00000487029 RNF114Q9Y508 228 aa7.22□□□□□ -1.25
SNRNP27-204ENST00000487029 PRR19A6NJB7 356 aa7.21□□□□□ -1.26
SNRNP27-204ENST00000487029 USP17L15C9J2P7 530 aa7.21□□□□□ -1.26
SNRNP27-204ENST00000487029 USP17L10C9JJH3 530 aa7.21□□□□□ -1.26
SNRNP27-204ENST00000487029 USP17L13C9JLJ4 530 aa7.21□□□□□ -1.26
SNRNP27-204ENST00000487029 USP17L12C9JPN9 530 aa7.21□□□□□ -1.26
SNRNP27-204ENST00000487029 USP17L11C9JVI0 530 aa7.21□□□□□ -1.26
SNRNP27-204ENST00000487029 USP17L21D6R901 530 aa7.21□□□□□ -1.26
SNRNP27-204ENST00000487029 USP17L18D6R9N7 530 aa7.21□□□□□ -1.26
SNRNP27-204ENST00000487029 USP17L22D6RA61 530 aa7.21□□□□□ -1.26
SNRNP27-204ENST00000487029 USP17L17D6RBQ6 530 aa7.21□□□□□ -1.26
SNRNP27-204ENST00000487029 USP17L19D6RCP7 530 aa7.21□□□□□ -1.26
SNRNP27-204ENST00000487029 USP17L20D6RJB6 530 aa7.21□□□□□ -1.26
SNRNP27-204ENST00000487029 LINC01387J3KSC0 135 aa7.21□□□□□ -1.26
SNRNP27-204ENST00000487029 USP17L24Q0WX57 530 aa7.21□□□□□ -1.26
SNRNP27-204ENST00000487029 TXNDC11Q6PKC3 985 aa7.21□□□□□ -1.26
SNRNP27-204ENST00000487029 TREML1Q86YW5 311 aa7.21□□□□□ -1.26
SNRNP27-204ENST00000487029 GLMNQ92990 594 aa7.21□□□□□ -1.26
SNRNP27-204ENST00000487029 ARXQ96QS3 562 aa7.21□□□□□ -1.26
SNRNP27-204ENST00000487029 SRA1Q9HD15 236 aaKnown RBP7.21□□□□□ -1.26
SNRNP27-204ENST00000487029 HMX2A2RU54 273 aa7.2□□□□□ -1.26
SNRNP27-204ENST00000487029 GSC2O15499 205 aa7.2□□□□□ -1.26
SNRNP27-204ENST00000487029 HOXD8P13378 290 aaPredicted RBP7.2□□□□□ -1.26
SNRNP27-204ENST00000487029 NFIAQ12857 509 aa7.2□□□□□ -1.26
SNRNP27-204ENST00000487029 COL13A1Q5TAT6 717 aaPredicted RBP7.2□□□□□ -1.26
SNRNP27-204ENST00000487029 MAP4K3Q8IVH8 894 aa7.2□□□□□ -1.26
SNRNP27-204ENST00000487029 TRIM42Q8IWZ5 723 aa7.2□□□□□ -1.26
SNRNP27-204ENST00000487029 C7orf69Q9H7B7 122 aa7.2□□□□□ -1.26
SNRNP27-204ENST00000487029 PPME1Q9Y570 386 aa7.2□□□□□ -1.26
SNRNP27-204ENST00000487029 DHX15O43143 795 aaKnown RBP7.19□□□□□ -1.26
SNRNP27-204ENST00000487029 FOXO3O43524 673 aa7.19□□□□□ -1.26
SNRNP27-204ENST00000487029 SOX18P35713 384 aa7.19□□□□□ -1.26
SNRNP27-204ENST00000487029 TRIP4Q15650 581 aaPredicted RBP7.19□□□□□ -1.26
SNRNP27-204ENST00000487029 C14orf37Q86TY3 774 aa7.19□□□□□ -1.26
SNRNP27-204ENST00000487029 CDC25BP30305 580 aa7.18□□□□□ -1.26
SNRNP27-204ENST00000487029 ATP11AP98196 1134 aa7.18□□□□□ -1.26
SNRNP27-204ENST00000487029 FAM26DQ5JW98 314 aa7.18□□□□□ -1.26
SNRNP27-204ENST00000487029 COX20Q5RI15 118 aa7.18□□□□□ -1.26
SNRNP27-204ENST00000487029 KIAA1211Q6ZU35 1233 aa7.18□□□□□ -1.26
SNRNP27-204ENST00000487029 ACAD11Q709F0 780 aa7.18□□□□□ -1.26
SNRNP27-204ENST00000487029 FAM46AQ96IP4 442 aaKnown RBP7.18□□□□□ -1.26
SNRNP27-204ENST00000487029 FAM196BA6NMK8 535 aa7.17□□□□□ -1.26
SNRNP27-204ENST00000487029 CD68P34810 354 aaPredicted RBP7.17□□□□□ -1.26
SNRNP27-204ENST00000487029 DTX1Q86Y01 620 aa7.17□□□□□ -1.26
SNRNP27-204ENST00000487029 FNBP4Q8N3X1 1017 aaPredicted RBP7.17□□□□□ -1.26
SNRNP27-204ENST00000487029 UTP4Q969X6 686 aaKnown RBP7.17□□□□□ -1.26
SNRNP27-204ENST00000487029 CARD10Q9BWT7 1032 aa7.17□□□□□ -1.26
SNRNP27-204ENST00000487029 PPP1R12CQ9BZL4 782 aa7.17□□□□□ -1.26
SNRNP27-204ENST00000487029 LACRTQ9GZZ8 138 aa7.17□□□□□ -1.26
SNRNP27-204ENST00000487029 DDX3YO15523 660 aaKnown RBP7.16□□□□□ -1.26
SNRNP27-204ENST00000487029 FZD5Q13467 585 aa7.16□□□□□ -1.26
SNRNP27-204ENST00000487029 RNF43Q68DV7 783 aa7.16□□□□□ -1.26
SNRNP27-204ENST00000487029 ETFBKMTQ8IXQ9 262 aa7.16□□□□□ -1.26
SNRNP27-204ENST00000487029 COL26A1Q96A83 441 aa7.16□□□□□ -1.26
SNRNP27-204ENST00000487029 CLUAP1Q96AJ1 413 aa7.16□□□□□ -1.26
SNRNP27-204ENST00000487029 VTI1AQ96AJ9 217 aa7.16□□□□□ -1.26
SNRNP27-204ENST00000487029 RBSNQ9H1K0 784 aa7.16□□□□□ -1.26
SNRNP27-204ENST00000487029 ADAM11O75078 769 aa7.15□□□□□ -1.26
SNRNP27-204ENST00000487029 NLRP13Q86W25 1043 aa7.15□□□□□ -1.26
SNRNP27-204ENST00000487029 DCAF11Q8TEB1 546 aa7.15□□□□□ -1.26
SNRNP27-204ENST00000487029 DBNDD2Q9BQY9 259 aa7.15□□□□□ -1.26
SNRNP27-204ENST00000487029 MUC3BQ9H195 1237 aa7.15□□□□□ -1.26
SNRNP27-204ENST00000487029 ADGRE2Q9UHX3 823 aa7.15□□□□□ -1.26
SNRNP27-204ENST00000487029 FLIIQ13045 1269 aa7.14□□□□□ -1.27
SNRNP27-204ENST00000487029 FKBP5Q13451 457 aaPredicted RBP7.14□□□□□ -1.27
SNRNP27-204ENST00000487029 INTS5Q6P9B9 1019 aaKnown RBP7.14□□□□□ -1.27
SNRNP27-204ENST00000487029 OR13H1Q8NG92 308 aa7.14□□□□□ -1.27
SNRNP27-204ENST00000487029 FOXD4L4Q8WXT5 416 aaPredicted RBP7.14□□□□□ -1.27
SNRNP27-204ENST00000487029 MYRFLQ96LU7 910 aa7.14□□□□□ -1.27
SNRNP27-204ENST00000487029 CEP41Q9BYV8 373 aa7.14□□□□□ -1.27
SNRNP27-204ENST00000487029 SAP130Q9H0E3 1048 aa7.14□□□□□ -1.27
SNRNP27-204ENST00000487029 WNT11O96014 354 aa7.13□□□□□ -1.27
SNRNP27-204ENST00000487029 HOXA10P31260 410 aaPredicted RBP7.13□□□□□ -1.27
SNRNP27-204ENST00000487029 UVSSAQ2YD98 709 aa7.13□□□□□ -1.27
SNRNP27-204ENST00000487029 CEP135Q66GS9 1140 aa7.13□□□□□ -1.27
SNRNP27-204ENST00000487029 FAM20CQ8IXL6 584 aa7.13□□□□□ -1.27
SNRNP27-204ENST00000487029 CACTIN-AS1Q8N1I8 211 aa7.13□□□□□ -1.27
SNRNP27-204ENST00000487029 SHKBP1Q8TBC3 707 aa7.13□□□□□ -1.27
SNRNP27-204ENST00000487029 UBASH3BQ8TF42 649 aa7.13□□□□□ -1.27
SNRNP27-204ENST00000487029 RASSF4Q9H2L5 321 aa7.13□□□□□ -1.27
SNRNP27-204ENST00000487029 VRTNQ9H8Y1 702 aa7.13□□□□□ -1.27
SNRNP27-204ENST00000487029 SH2B1Q9NRF2 756 aaPredicted RBP7.13□□□□□ -1.27
SNRNP27-204ENST00000487029 FSCN2O14926 492 aa7.12□□□□□ -1.27
SNRNP27-204ENST00000487029 EPHA1P21709 976 aa7.12□□□□□ -1.27
SNRNP27-204ENST00000487029 LMOD1P29536 600 aaPredicted RBP7.12□□□□□ -1.27
SNRNP27-204ENST00000487029 CDC27P30260 824 aa7.12□□□□□ -1.27
SNRNP27-204ENST00000487029 GRIK1P39086 918 aa7.12□□□□□ -1.27
SNRNP27-204ENST00000487029 DUOXA2Q1HG44 320 aa7.12□□□□□ -1.27
SNRNP27-204ENST00000487029 CLEC10AQ8IUN9 316 aa7.11□□□□□ -1.27
SNRNP27-204ENST00000487029 KLHDC7BQ96G42 594 aa7.11□□□□□ -1.27
SNRNP27-204ENST00000487029 PRIMPOLQ96LW4 560 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms