RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-204ENST00000486446 RPIAP49247 311 aa9.38□□□□□ -0.91
PUDP-204ENST00000486446 SMIM5Q71RC9 77 aa9.38□□□□□ -0.91
PUDP-204ENST00000486446 COL24A1Q17RW2 1714 aa9.37□□□□□ -0.91
PUDP-204ENST00000486446 UBR3Q6ZT12 1888 aa9.37□□□□□ -0.91
PUDP-204ENST00000486446 RNMTO43148 476 aaKnown RBP9.37□□□□□ -0.91
PUDP-204ENST00000486446 BRPF1P55201 1214 aaPredicted RBP9.37□□□□□ -0.91
PUDP-204ENST00000486446 DNAJC5GQ8N7S2 189 aa9.37□□□□□ -0.91
PUDP-204ENST00000486446 LGR6Q9HBX8 967 aa9.37□□□□□ -0.91
PUDP-204ENST00000486446 ATP10DQ9P241 1426 aa9.37□□□□□ -0.91
PUDP-204ENST00000486446 ZNF831Q5JPB2 1677 aa9.36□□□□□ -0.91
PUDP-204ENST00000486446 VIRMAQ69YN4 1812 aaKnown RBP9.36□□□□□ -0.91
PUDP-204ENST00000486446 U2AF1L5P0DN76 240 aaPredicted RBP9.36□□□□□ -0.91
PUDP-204ENST00000486446 SSFA2P28290 1259 aa9.36□□□□□ -0.91
PUDP-204ENST00000486446 PRKAR2BP31323 418 aa9.36□□□□□ -0.91
PUDP-204ENST00000486446 CLK2P49760 499 aaKnown RBP9.36□□□□□ -0.91
PUDP-204ENST00000486446 U2AF1Q01081 240 aaKnown RBP eCLIP9.36□□□□□ -0.91
PUDP-204ENST00000486446 NEUROD2Q15784 382 aa9.36□□□□□ -0.91
PUDP-204ENST00000486446 SH3D19Q5HYK7 790 aa9.36□□□□□ -0.91
PUDP-204ENST00000486446 DESI1Q6ICB0 168 aa9.36□□□□□ -0.91
PUDP-204ENST00000486446 ZNF598Q86UK7 904 aaKnown RBP9.36□□□□□ -0.91
PUDP-204ENST00000486446 AMIGO3Q86WK7 504 aa9.36□□□□□ -0.91
PUDP-204ENST00000486446 GAS2L2Q8NHY3 880 aa9.36□□□□□ -0.91
PUDP-204ENST00000486446 PRR7Q8TB68 274 aa9.36□□□□□ -0.91
PUDP-204ENST00000486446 SLC4A9Q96Q91 983 aa9.36□□□□□ -0.91
PUDP-204ENST00000486446 IRX2Q9BZI1 471 aaPredicted RBP9.36□□□□□ -0.91
PUDP-204ENST00000486446 ZBTB3Q9H5J0 574 aa9.36□□□□□ -0.91
PUDP-204ENST00000486446 SLC52A2Q9HAB3 445 aa9.36□□□□□ -0.91
PUDP-204ENST00000486446 RTCBQ9Y3I0 505 aaKnown RBP9.36□□□□□ -0.91
PUDP-204ENST00000486446 GOLGB1Q14789 3259 aaKnown RBP9.36□□□□□ -0.91
PUDP-204ENST00000486446 COL5A3P25940 1745 aaPredicted RBP9.36□□□□□ -0.91
PUDP-204ENST00000486446 GNAT3A8MTJ3 354 aa9.35□□□□□ -0.91
PUDP-204ENST00000486446 GRIN3BO60391 1043 aa9.35□□□□□ -0.91
PUDP-204ENST00000486446 LILRB3O75022 631 aa9.35□□□□□ -0.91
PUDP-204ENST00000486446 SKIV2LQ15477 1246 aaKnown RBP9.35□□□□□ -0.91
PUDP-204ENST00000486446 MAP3K5Q99683 1374 aa9.35□□□□□ -0.91
PUDP-204ENST00000486446 MRC1P22897 1456 aa9.34□□□□□ -0.91
PUDP-204ENST00000486446 CNTNAP4Q9C0A0 1308 aa9.34□□□□□ -0.91
PUDP-204ENST00000486446 FANCIQ9NVI1 1328 aa9.34□□□□□ -0.91
PUDP-204ENST00000486446 TJP1Q07157 1748 aa9.34□□□□□ -0.91
PUDP-204ENST00000486446 EIF5BO60841 1220 aaKnown RBP9.34□□□□□ -0.91
PUDP-204ENST00000486446 TEFQ10587 303 aa9.34□□□□□ -0.91
PUDP-204ENST00000486446 SLC39A6Q13433 755 aa9.34□□□□□ -0.91
PUDP-204ENST00000486446 QPCTQ16769 361 aa9.34□□□□□ -0.91
PUDP-204ENST00000486446 TRAPPC3LQ5T215 181 aa9.34□□□□□ -0.91
PUDP-204ENST00000486446 RC3H1Q5TC82 1133 aaKnown RBP9.34□□□□□ -0.91
PUDP-204ENST00000486446 POLR3EQ9NVU0 708 aa9.34□□□□□ -0.91
PUDP-204ENST00000486446 RBM19Q9Y4C8 960 aaKnown RBP9.34□□□□□ -0.91
PUDP-204ENST00000486446 ADAMTS7Q9UKP4 1686 aa9.34□□□□□ -0.91
PUDP-204ENST00000486446 CFAP99D6REC4 459 aa9.33□□□□□ -0.92
PUDP-204ENST00000486446 RPS6KA4O75676 772 aa9.33□□□□□ -0.92
PUDP-204ENST00000486446 NEFMP07197 916 aa9.33□□□□□ -0.92
PUDP-204ENST00000486446 RFC4P35249 363 aa9.33□□□□□ -0.92
PUDP-204ENST00000486446 TTC5Q8N0Z6 440 aa9.33□□□□□ -0.92
PUDP-204ENST00000486446 PHACTR3Q96KR7 559 aa9.33□□□□□ -0.92
PUDP-204ENST00000486446 CICQ96RK0 1608 aaPredicted RBP9.32□□□□□ -0.92
PUDP-204ENST00000486446 YBX3P16989 372 aaKnown RBP eCLIP9.32□□□□□ -0.925e-7■■□□□ 12.5
PUDP-204ENST00000486446 CRKLP46109 303 aaKnown RBP9.32□□□□□ -0.92
PUDP-204ENST00000486446 CSPP1Q1MSJ5 1256 aa9.32□□□□□ -0.92
PUDP-204ENST00000486446 TRIM67Q6ZTA4 783 aa9.32□□□□□ -0.92
PUDP-204ENST00000486446 DNAJC10Q8IXB1 793 aa9.32□□□□□ -0.92
PUDP-204ENST00000486446 IL17REQ8NFR9 667 aa9.32□□□□□ -0.92
PUDP-204ENST00000486446 NLGN2Q8NFZ4 835 aa9.32□□□□□ -0.92
PUDP-204ENST00000486446 KCPQ6ZWJ8 1503 aa9.31□□□□□ -0.92
PUDP-204ENST00000486446 CD2BP2O95400 341 aaKnown RBP9.31□□□□□ -0.92
PUDP-204ENST00000486446 PTPRNQ16849 979 aa9.31□□□□□ -0.92
PUDP-204ENST00000486446 ZNF697Q5TEC3 545 aa9.31□□□□□ -0.92
PUDP-204ENST00000486446 RTF1Q92541 710 aaKnown RBP9.31□□□□□ -0.92
PUDP-204ENST00000486446 NUDT12Q9BQG2 462 aa9.31□□□□□ -0.92
PUDP-204ENST00000486446 CCDC87Q9NVE4 849 aa9.31□□□□□ -0.92
PUDP-204ENST00000486446 C4AP0C0L4 1744 aa9.31□□□□□ -0.92
PUDP-204ENST00000486446 MMP10P09238 476 aa9.3□□□□□ -0.92
PUDP-204ENST00000486446 LAPTM4AQ15012 233 aa9.3□□□□□ -0.92
PUDP-204ENST00000486446 RTL5Q5HYW3 569 aaPredicted RBP9.3□□□□□ -0.92
PUDP-204ENST00000486446 INTS5Q6P9B9 1019 aaKnown RBP9.3□□□□□ -0.92
PUDP-204ENST00000486446 LYPD8Q6UX82 237 aa9.3□□□□□ -0.92
PUDP-204ENST00000486446 NLGN1Q8N2Q7 840 aa9.3□□□□□ -0.92
PUDP-204ENST00000486446 PROCA1Q8NCQ7 364 aaPredicted RBP9.3□□□□□ -0.92
PUDP-204ENST00000486446 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.3□□□□□ -0.92
PUDP-204ENST00000486446 GOPCQ9HD26 462 aa9.3□□□□□ -0.92
PUDP-204ENST00000486446 WWC3Q9ULE0 1092 aa9.3□□□□□ -0.92
PUDP-204ENST00000486446 CD2APQ9Y5K6 639 aa9.3□□□□□ -0.92
PUDP-204ENST00000486446 SIPA1L3O60292 1781 aaPredicted RBP9.29□□□□□ -0.92
PUDP-204ENST00000486446 UBR2Q8IWV8 1755 aa9.29□□□□□ -0.92
PUDP-204ENST00000486446 BTBD11A6QL63 1104 aa9.29□□□□□ -0.92
PUDP-204ENST00000486446 ZBTB24O43167 697 aaPredicted RBP9.29□□□□□ -0.92
PUDP-204ENST00000486446 GDF9O60383 454 aa9.29□□□□□ -0.92
PUDP-204ENST00000486446 GFRA3O60609 400 aa9.29□□□□□ -0.92
PUDP-204ENST00000486446 CCNYL3P0C7X3 344 aa9.29□□□□□ -0.92
PUDP-204ENST00000486446 CYP19A1P11511 503 aaPredicted RBP9.29□□□□□ -0.92
PUDP-204ENST00000486446 PTCRAQ6ISU1 281 aaPredicted RBP9.29□□□□□ -0.92
PUDP-204ENST00000486446 CCDC24Q8N4L8 307 aa9.29□□□□□ -0.92
PUDP-204ENST00000486446 ANP32EQ9BTT0 268 aa9.29□□□□□ -0.92
PUDP-204ENST00000486446 EVA1BQ9NVM1 165 aa9.29□□□□□ -0.92
PUDP-204ENST00000486446 SRP68Q9UHB9 627 aaKnown RBP9.29□□□□□ -0.92
PUDP-204ENST00000486446 MYH14Q7Z406 1995 aaKnown RBP9.29□□□□□ -0.92
PUDP-204ENST00000486446 MAPK8IP3Q9UPT6 1336 aa9.29□□□□□ -0.92
PUDP-204ENST00000486446 CEMIPQ8WUJ3 1361 aa9.28□□□□□ -0.92
PUDP-204ENST00000486446 HEG1Q9ULI3 1381 aa9.28□□□□□ -0.92
PUDP-204ENST00000486446 STARD3NLO95772 234 aa9.28□□□□□ -0.92
PUDP-204ENST00000486446 GYS1P13807 737 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms