RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 NEUROD6Q96NK8 337 aa17.66■□□□□ 0.42
COL9A1-207ENST00000486080 MPHOSPH8Q99549 860 aa17.66■□□□□ 0.42
COL9A1-207ENST00000486080 IGHMBP2P38935 993 aaKnown RBP17.65■□□□□ 0.42
COL9A1-207ENST00000486080 CCDC125Q86Z20 511 aa17.65■□□□□ 0.42
COL9A1-207ENST00000486080 VGLL2Q8N8G2 317 aa17.65■□□□□ 0.42
COL9A1-207ENST00000486080 HELBQ8NG08 1087 aaPredicted RBP17.65■□□□□ 0.42
COL9A1-207ENST00000486080 A0A1B0GUL7 405 aa17.65■□□□□ 0.42
COL9A1-207ENST00000486080 SOCS7O14512 581 aa17.65■□□□□ 0.42
COL9A1-207ENST00000486080 TBC1D9Q6ZT07 1266 aa17.65■□□□□ 0.42
COL9A1-207ENST00000486080 CELF1Q92879 486 aaKnown RBP17.65■□□□□ 0.42
COL9A1-207ENST00000486080 CDC5LQ99459 802 aaKnown RBP17.65■□□□□ 0.42
COL9A1-207ENST00000486080 TRIM6-TRIM34B2RNG4 842 aa17.64■□□□□ 0.41
COL9A1-207ENST00000486080 ERC2O15083 957 aa17.64■□□□□ 0.41
COL9A1-207ENST00000486080 GLRX3O76003 335 aaKnown RBP17.64■□□□□ 0.41
COL9A1-207ENST00000486080 MMP10P09238 476 aa17.64■□□□□ 0.41
COL9A1-207ENST00000486080 ST5P78524 1137 aa17.64■□□□□ 0.41
COL9A1-207ENST00000486080 PDGFDQ9GZP0 370 aaPredicted RBP17.64■□□□□ 0.41
COL9A1-207ENST00000486080 NRXN2Q9P2S2 1712 aa17.64■□□□□ 0.41
COL9A1-207ENST00000486080 CDC45O75419 566 aa17.63■□□□□ 0.41
COL9A1-207ENST00000486080 ANKRD18AQ8IVF6 992 aa17.63■□□□□ 0.41
COL9A1-207ENST00000486080 RILPL2Q969X0 211 aa17.63■□□□□ 0.41
COL9A1-207ENST00000486080 ANKRD31Q8N7Z5 1873 aa17.63■□□□□ 0.41
COL9A1-207ENST00000486080 MROH5Q6ZUA9 1318 aa17.63■□□□□ 0.41
COL9A1-207ENST00000486080 PDE8BO95263 885 aa17.63■□□□□ 0.41
COL9A1-207ENST00000486080 ADORA1P30542 326 aa17.63■□□□□ 0.41
COL9A1-207ENST00000486080 AKAP2Q9Y2D5 859 aa17.63■□□□□ 0.41
COL9A1-207ENST00000486080 TAF5LO75529 589 aa17.62■□□□□ 0.41
COL9A1-207ENST00000486080 ATP2B3Q16720 1220 aa17.62■□□□□ 0.41
COL9A1-207ENST00000486080 BOLA2Q9H3K6 86 aa17.62■□□□□ 0.41
COL9A1-207ENST00000486080 A0A1B0GUL6 1792 aa17.62■□□□□ 0.41
COL9A1-207ENST00000486080 DDX46Q7L014 1031 aaKnown RBP17.61■□□□□ 0.41
COL9A1-207ENST00000486080 XAGE2Q96GT9 111 aa17.61■□□□□ 0.41
COL9A1-207ENST00000486080 PARP3Q9Y6F1 533 aa17.61■□□□□ 0.41
COL9A1-207ENST00000486080 SNAP23O00161 211 aa17.61■□□□□ 0.41
COL9A1-207ENST00000486080 ATP5JP18859 108 aa17.61■□□□□ 0.41
COL9A1-207ENST00000486080 RPS8P62241 208 aaKnown RBP17.61■□□□□ 0.41
COL9A1-207ENST00000486080 BSDC1Q9NW68 430 aaPredicted RBP17.61■□□□□ 0.41
COL9A1-207ENST00000486080 CHRNDQ07001 517 aa17.6■□□□□ 0.41
COL9A1-207ENST00000486080 CRY2Q49AN0 593 aa17.6■□□□□ 0.41
COL9A1-207ENST00000486080 NDUFB9Q9Y6M9 179 aa17.59■□□□□ 0.41
COL9A1-207ENST00000486080 FGFR2P21802 821 aa17.58■□□□□ 0.41
COL9A1-207ENST00000486080 MFAP1P55081 439 aaKnown RBP17.58■□□□□ 0.41
COL9A1-207ENST00000486080 PUM3Q15397 648 aaKnown RBP17.58■□□□□ 0.41
COL9A1-207ENST00000486080 CNTROBQ8N137 903 aa17.58■□□□□ 0.41
COL9A1-207ENST00000486080 RPGRQ92834 1020 aaKnown RBP17.58■□□□□ 0.41
COL9A1-207ENST00000486080 MINPP1Q9UNW1 487 aa17.58■□□□□ 0.41
COL9A1-207ENST00000486080 ARAP2Q8WZ64 1704 aa17.58■□□□□ 0.41
COL9A1-207ENST00000486080 GORABQ5T7V8 394 aa17.58■□□□□ 0.4
COL9A1-207ENST00000486080 SLC51AQ86UW1 340 aa17.58■□□□□ 0.4
COL9A1-207ENST00000486080 EDC3Q96F86 508 aaKnown RBP17.58■□□□□ 0.4
COL9A1-207ENST00000486080 KLRG2A4D1S0 409 aaPredicted RBP17.57■□□□□ 0.4
COL9A1-207ENST00000486080 WTIPA6NIX2 430 aaPredicted RBP17.57■□□□□ 0.4
COL9A1-207ENST00000486080 LPIN2Q92539 896 aa17.57■□□□□ 0.4
COL9A1-207ENST00000486080 BRIP1Q9BX63 1249 aa17.57■□□□□ 0.4
COL9A1-207ENST00000486080 CHMLP26374 656 aa17.56■□□□□ 0.4
COL9A1-207ENST00000486080 GRAPQ13588 217 aa17.56■□□□□ 0.4
COL9A1-207ENST00000486080 GRAPLQ8TC17 118 aaPredicted RBP17.56■□□□□ 0.4
COL9A1-207ENST00000486080 CCDC158Q5M9N0 1113 aa17.56■□□□□ 0.4
COL9A1-207ENST00000486080 RBM17Q96I25 401 aaKnown RBP17.56■□□□□ 0.4
COL9A1-207ENST00000486080 DNAJC2Q99543 621 aaKnown RBP17.56■□□□□ 0.4
COL9A1-207ENST00000486080 HAUS7Q99871 368 aa17.56■□□□□ 0.4
COL9A1-207ENST00000486080 SLC5A1P13866 664 aa17.55■□□□□ 0.4
COL9A1-207ENST00000486080 TTC39AQ5SRH9 613 aa17.55■□□□□ 0.4
COL9A1-207ENST00000486080 CASC1Q6TDU7 716 aa17.55■□□□□ 0.4
COL9A1-207ENST00000486080 EVI5LQ96CN4 794 aa17.55■□□□□ 0.4
COL9A1-207ENST00000486080 COL11A2P13942 1736 aaPredicted RBP17.55■□□□□ 0.4
COL9A1-207ENST00000486080 HOXA10P31260 410 aaPredicted RBP17.54■□□□□ 0.4
COL9A1-207ENST00000486080 AKAP11Q9UKA4 1901 aa17.54■□□□□ 0.4
COL9A1-207ENST00000486080 IFIT1P09914 478 aaKnown RBP17.54■□□□□ 0.4
COL9A1-207ENST00000486080 SCARF1Q14162 830 aa17.54■□□□□ 0.4
COL9A1-207ENST00000486080 PHKA1P46020 1223 aa17.53■□□□□ 0.4
COL9A1-207ENST00000486080 CCDC102BQ68D86 513 aa17.53■□□□□ 0.4
COL9A1-207ENST00000486080 SNRKQ9NRH2 765 aa17.53■□□□□ 0.4
COL9A1-207ENST00000486080 PDE6BP35913 854 aa17.52■□□□□ 0.4
COL9A1-207ENST00000486080 PI16Q6UXB8 463 aa17.52■□□□□ 0.4
COL9A1-207ENST00000486080 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.52■□□□□ 0.4
COL9A1-207ENST00000486080 ESYT1Q9BSJ8 1104 aa17.52■□□□□ 0.4
COL9A1-207ENST00000486080 UPF2Q9HAU5 1272 aaKnown RBP17.52■□□□□ 0.4
COL9A1-207ENST00000486080 GOLIM4O00461 696 aa17.51■□□□□ 0.39
COL9A1-207ENST00000486080 SRGNP10124 158 aa17.51■□□□□ 0.39
COL9A1-207ENST00000486080 CRAMP1Q96RY5 1269 aa17.51■□□□□ 0.39
COL9A1-207ENST00000486080 FSD1Q9BTV5 496 aa17.51■□□□□ 0.39
COL9A1-207ENST00000486080 ANKRD2Q9GZV1 360 aa17.51■□□□□ 0.39
COL9A1-207ENST00000486080 IL25Q9H293 177 aa17.51■□□□□ 0.39
COL9A1-207ENST00000486080 MCAMP43121 646 aa17.51■□□□□ 0.39
COL9A1-207ENST00000486080 BCAMP50895 628 aa17.51■□□□□ 0.39
COL9A1-207ENST00000486080 FKBP4Q02790 459 aaKnown RBP eCLIP17.51■□□□□ 0.39
COL9A1-207ENST00000486080 UBE4AQ14139 1066 aa17.51■□□□□ 0.39
COL9A1-207ENST00000486080 TBC1D32Q96NH3 1257 aa17.51■□□□□ 0.39
COL9A1-207ENST00000486080 PAG1Q9NWQ8 432 aa17.51■□□□□ 0.39
COL9A1-207ENST00000486080 CACNA1SQ13698 1873 aa17.5■□□□□ 0.39
COL9A1-207ENST00000486080 SLC16A10Q8TF71 515 aa17.5■□□□□ 0.39
COL9A1-207ENST00000486080 ANTXR1Q9H6X2 564 aa17.5■□□□□ 0.39
COL9A1-207ENST00000486080 BBOX1O75936 387 aa17.49■□□□□ 0.39
COL9A1-207ENST00000486080 NPR1P16066 1061 aa17.49■□□□□ 0.39
COL9A1-207ENST00000486080 KLRK1P26718 216 aa17.49■□□□□ 0.39
COL9A1-207ENST00000486080 ARID4AP29374 1257 aaPredicted RBP17.49■□□□□ 0.39
COL9A1-207ENST00000486080 ZAP70P43403 619 aa17.49■□□□□ 0.39
COL9A1-207ENST00000486080 CWC27Q6UX04 472 aaKnown RBP17.49■□□□□ 0.39
COL9A1-207ENST00000486080 ZNF512BQ96KM6 892 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms