RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 SOX18P35713 384 aa8.64□□□□□ -1.03
GCFC2-209ENST00000486016 PBXIP1Q96AQ6 731 aa8.64□□□□□ -1.03
GCFC2-209ENST00000486016 SMG9Q9H0W8 520 aaKnown RBP8.64□□□□□ -1.03
GCFC2-209ENST00000486016 USP21Q9UK80 565 aa8.64□□□□□ -1.03
GCFC2-209ENST00000486016 RNF112Q9ULX5 631 aa8.64□□□□□ -1.03
GCFC2-209ENST00000486016 LOC102724428A0A0B4J2F2 783 aa8.63□□□□□ -1.03
GCFC2-209ENST00000486016 J3QW42 95 aa8.63□□□□□ -1.03
GCFC2-209ENST00000486016 SIK1P57059 783 aa8.63□□□□□ -1.03
GCFC2-209ENST00000486016 MKNK1Q9BUB5 465 aa8.63□□□□□ -1.03
GCFC2-209ENST00000486016 ZBTB39O15060 712 aa8.62□□□□□ -1.03
GCFC2-209ENST00000486016 PTCD1O75127 700 aaKnown RBP8.62□□□□□ -1.03
GCFC2-209ENST00000486016 ARID4AP29374 1257 aaPredicted RBP8.62□□□□□ -1.03
GCFC2-209ENST00000486016 NAA30Q147X3 362 aaPredicted RBP8.62□□□□□ -1.03
GCFC2-209ENST00000486016 NLRP13Q86W25 1043 aa8.62□□□□□ -1.03
GCFC2-209ENST00000486016 WFDC8Q8IUA0 241 aa8.62□□□□□ -1.03
GCFC2-209ENST00000486016 COBLO75128 1261 aa8.61□□□□□ -1.03
GCFC2-209ENST00000486016 PSAPP07602 524 aa8.61□□□□□ -1.03
GCFC2-209ENST00000486016 EIF2AK2P19525 551 aaKnown RBP8.61□□□□□ -1.03
GCFC2-209ENST00000486016 PLD4Q96BZ4 506 aa8.61□□□□□ -1.03
GCFC2-209ENST00000486016 DLL1O00548 723 aa8.6□□□□□ -1.03
GCFC2-209ENST00000486016 PAX4O43316 350 aa8.6□□□□□ -1.03
GCFC2-209ENST00000486016 NSUN5Q96P11 429 aaKnown RBP8.6□□□□□ -1.03
GCFC2-209ENST00000486016 ZAP70P43403 619 aa8.59□□□□□ -1.03
GCFC2-209ENST00000486016 IGF2-ASQ6U949 168 aa8.59□□□□□ -1.03
GCFC2-209ENST00000486016 OR13H1Q8NG92 308 aa8.59□□□□□ -1.03
GCFC2-209ENST00000486016 WFDC12Q8WWY7 111 aa8.59□□□□□ -1.03
GCFC2-209ENST00000486016 STIM2Q9P246 746 aa8.59□□□□□ -1.03
GCFC2-209ENST00000486016 SERPINA10Q9UK55 444 aa8.59□□□□□ -1.03
GCFC2-209ENST00000486016 COL17A1Q9UMD9 1497 aaPredicted RBP8.58□□□□□ -1.04
GCFC2-209ENST00000486016 NOS3P29474 1203 aa8.58□□□□□ -1.04
GCFC2-209ENST00000486016 COL13A1Q5TAT6 717 aaPredicted RBP8.58□□□□□ -1.04
GCFC2-209ENST00000486016 PIK3R5Q8WYR1 880 aa8.58□□□□□ -1.04
GCFC2-209ENST00000486016 SEPT3Q9UH03 358 aa8.58□□□□□ -1.04
GCFC2-209ENST00000486016 UBAP1LF5GYI3 381 aa8.57□□□□□ -1.04
GCFC2-209ENST00000486016 TXKP42681 527 aa8.57□□□□□ -1.04
GCFC2-209ENST00000486016 PCMTD2Q9NV79 361 aa8.57□□□□□ -1.04
GCFC2-209ENST00000486016 ATP2B4P23634 1241 aa8.56□□□□□ -1.04
GCFC2-209ENST00000486016 CCDC97Q96F63 343 aaPredicted RBP8.56□□□□□ -1.04
GCFC2-209ENST00000486016 FAM13BQ9NYF5 915 aa8.56□□□□□ -1.04
GCFC2-209ENST00000486016 ARID3CA6NKF2 412 aa8.55□□□□□ -1.04
GCFC2-209ENST00000486016 TM4SF5O14894 197 aa8.55□□□□□ -1.04
GCFC2-209ENST00000486016 GHRHP01286 108 aa8.55□□□□□ -1.04
GCFC2-209ENST00000486016 IREB2P48200 963 aaKnown RBP8.55□□□□□ -1.04
GCFC2-209ENST00000486016 SETDB1Q15047 1291 aa8.55□□□□□ -1.04
GCFC2-209ENST00000486016 IL22RA1Q8N6P7 574 aa8.55□□□□□ -1.04
GCFC2-209ENST00000486016 GPR152Q8TDT2 470 aa8.55□□□□□ -1.04
GCFC2-209ENST00000486016 MEGF10Q96KG7 1140 aa8.55□□□□□ -1.04
GCFC2-209ENST00000486016 TRIM33Q9UPN9 1127 aa8.55□□□□□ -1.04
GCFC2-209ENST00000486016 KIF4AO95239 1232 aa8.54□□□□□ -1.04
GCFC2-209ENST00000486016 YBX3P16989 372 aaKnown RBP eCLIP8.54□□□□□ -1.04
GCFC2-209ENST00000486016 GDF6Q6KF10 455 aaPredicted RBP8.54□□□□□ -1.04
GCFC2-209ENST00000486016 ADAMTSL4Q6UY14 1074 aa8.54□□□□□ -1.04
GCFC2-209ENST00000486016 TMEM130Q8N3G9 435 aa8.54□□□□□ -1.04
GCFC2-209ENST00000486016 SLC51AQ86UW1 340 aa8.53□□□□□ -1.04
GCFC2-209ENST00000486016 DZIP1LQ8IYY4 767 aaKnown RBP8.53□□□□□ -1.04
GCFC2-209ENST00000486016 ABTB2Q8N961 1025 aa8.53□□□□□ -1.04
GCFC2-209ENST00000486016 FMNL2Q96PY5 1086 aa8.53□□□□□ -1.04
GCFC2-209ENST00000486016 SSTR4P31391 388 aa8.52□□□□□ -1.05
GCFC2-209ENST00000486016 CACTIN-AS1Q8N1I8 211 aa8.52□□□□□ -1.05
GCFC2-209ENST00000486016 SRA1Q9HD15 236 aaKnown RBP8.52□□□□□ -1.05
GCFC2-209ENST00000486016 FNDC3AQ9Y2H6 1198 aaKnown RBP8.52□□□□□ -1.05
GCFC2-209ENST00000486016 TMEM88BA6NKF7 163 aa8.51□□□□□ -1.05
GCFC2-209ENST00000486016 CYP2E1P05181 493 aaPredicted RBP8.51□□□□□ -1.05
GCFC2-209ENST00000486016 SCNN1AP37088 669 aa8.51□□□□□ -1.05
GCFC2-209ENST00000486016 ATP11AP98196 1134 aa8.51□□□□□ -1.05
GCFC2-209ENST00000486016 HYAL2Q12891 473 aa8.51□□□□□ -1.05
GCFC2-209ENST00000486016 ATCAYQ86WG3 371 aa8.51□□□□□ -1.05
GCFC2-209ENST00000486016 RBSNQ9H1K0 784 aa8.51□□□□□ -1.05
GCFC2-209ENST00000486016 ABI2Q9NYB9 513 aaPredicted RBP8.51□□□□□ -1.05
GCFC2-209ENST00000486016 F8W735 103 aaPredicted RBP8.5□□□□□ -1.05
GCFC2-209ENST00000486016 PDE12Q6L8Q7 609 aaKnown RBP8.5□□□□□ -1.05
GCFC2-209ENST00000486016 PRR23CQ6ZRP0 262 aa8.5□□□□□ -1.05
GCFC2-209ENST00000486016 Q6ZS46 218 aa8.5□□□□□ -1.05
GCFC2-209ENST00000486016 MAP4K3Q8IVH8 894 aa8.5□□□□□ -1.05
GCFC2-209ENST00000486016 CEP120Q8N960 986 aa8.5□□□□□ -1.05
GCFC2-209ENST00000486016 GALNT11Q8NCW6 608 aa8.5□□□□□ -1.05
GCFC2-209ENST00000486016 HELQQ8TDG4 1101 aa8.5□□□□□ -1.05
GCFC2-209ENST00000486016 KRTAP4-7Q9BYR0 210 aa8.5□□□□□ -1.05
GCFC2-209ENST00000486016 AKTIPQ9H8T0 292 aa8.5□□□□□ -1.05
GCFC2-209ENST00000486016 GTF3C3Q9Y5Q9 886 aa8.5□□□□□ -1.05
GCFC2-209ENST00000486016 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.5□□□□□ -1.05
GCFC2-209ENST00000486016 ALX3O95076 343 aa8.49□□□□□ -1.05
GCFC2-209ENST00000486016 SSFA2P28290 1259 aa8.49□□□□□ -1.05
GCFC2-209ENST00000486016 IRAK1P51617 712 aa8.49□□□□□ -1.05
GCFC2-209ENST00000486016 LCE1DQ5T752 114 aa8.49□□□□□ -1.05
GCFC2-209ENST00000486016 TTC39BQ5VTQ0 682 aaPredicted RBP8.49□□□□□ -1.05
GCFC2-209ENST00000486016 XKR5Q6UX68 686 aa8.49□□□□□ -1.05
GCFC2-209ENST00000486016 NUDT16Q96DE0 195 aaKnown RBP8.49□□□□□ -1.05
GCFC2-209ENST00000486016 MRPL18Q9H0U6 180 aaKnown RBP8.49□□□□□ -1.05
GCFC2-209ENST00000486016 MUC3BQ9H195 1237 aa8.49□□□□□ -1.05
GCFC2-209ENST00000486016 RASSF4Q9H2L5 321 aa8.49□□□□□ -1.05
GCFC2-209ENST00000486016 C1orf115Q9H7X2 142 aa8.49□□□□□ -1.05
GCFC2-209ENST00000486016 ELP3Q9H9T3 547 aa8.49□□□□□ -1.05
GCFC2-209ENST00000486016 TMEM63CQ9P1W3 806 aa8.49□□□□□ -1.05
GCFC2-209ENST00000486016 CNTN3Q9P232 1028 aa8.49□□□□□ -1.05
GCFC2-209ENST00000486016 PPME1Q9Y570 386 aa8.49□□□□□ -1.05
GCFC2-209ENST00000486016 CCDC82Q8N4S0 544 aa8.47□□□□□ -1.05
GCFC2-209ENST00000486016 PBX4Q9BYU1 374 aa8.47□□□□□ -1.05
GCFC2-209ENST00000486016 GGNBP2Q9H3C7 697 aa8.47□□□□□ -1.05
GCFC2-209ENST00000486016 SALL4Q9UJQ4 1053 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 245.7 ms