RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 SLC43A3Q8NBI5 491 aa6.07□□□□□ -1.44
RTN4-213ENST00000485749 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.07□□□□□ -1.44
RTN4-213ENST00000485749 ZNF417Q8TAU3 575 aa6.07□□□□□ -1.44
RTN4-213ENST00000485749 RHPN1Q8TCX5 695 aa6.07□□□□□ -1.44
RTN4-213ENST00000485749 PIK3R5Q8WYR1 880 aa6.07□□□□□ -1.44
RTN4-213ENST00000485749 DMRTB1Q96MA1 342 aa6.07□□□□□ -1.44
RTN4-213ENST00000485749 ZNF587Q96SQ5 575 aaPredicted RBP6.07□□□□□ -1.44
RTN4-213ENST00000485749 DNAJC2Q99543 621 aaKnown RBP6.07□□□□□ -1.44
RTN4-213ENST00000485749 MKNK1Q9BUB5 465 aa6.07□□□□□ -1.44
RTN4-213ENST00000485749 EFCC1Q9HA90 598 aa6.07□□□□□ -1.44
RTN4-213ENST00000485749 METTL5Q9NRN9 209 aaKnown RBP6.07□□□□□ -1.44
RTN4-213ENST00000485749 ZNF358Q9NW07 568 aa6.07□□□□□ -1.44
RTN4-213ENST00000485749 RIPOR2Q9Y4F9 1068 aa6.07□□□□□ -1.44
RTN4-213ENST00000485749 C9orf172C9J069 976 aa6.06□□□□□ -1.44
RTN4-213ENST00000485749 PTMAP06454 111 aaKnown RBP6.06□□□□□ -1.44
RTN4-213ENST00000485749 TXLNAP40222 546 aa6.06□□□□□ -1.44
RTN4-213ENST00000485749 PSMA6P60900 246 aaKnown RBP6.06□□□□□ -1.44
RTN4-213ENST00000485749 HDLBPQ00341 1268 aaKnown RBP6.06□□□□□ -1.44
RTN4-213ENST00000485749 GLIPR1L2Q4G1C9 344 aa6.06□□□□□ -1.44
RTN4-213ENST00000485749 CNPY4Q8N129 248 aa6.06□□□□□ -1.44
RTN4-213ENST00000485749 TSEN2Q8NCE0 465 aaKnown RBP6.06□□□□□ -1.44
RTN4-213ENST00000485749 MARCH6O60337 910 aa6.05□□□□□ -1.44
RTN4-213ENST00000485749 PRPF40AO75400 957 aaKnown RBP6.05□□□□□ -1.44
RTN4-213ENST00000485749 XPCQ01831 940 aaPredicted RBP6.05□□□□□ -1.44
RTN4-213ENST00000485749 PLCB3Q01970 1234 aa6.05□□□□□ -1.44
RTN4-213ENST00000485749 DSC3Q14574 896 aa6.05□□□□□ -1.44
RTN4-213ENST00000485749 LDLRAD1Q5T700 205 aa6.05□□□□□ -1.44
RTN4-213ENST00000485749 C1orf53Q5VUE5 145 aa6.05□□□□□ -1.44
RTN4-213ENST00000485749 TMC4Q7Z404 712 aa6.05□□□□□ -1.44
RTN4-213ENST00000485749 SLC9A9Q8IVB4 645 aa6.05□□□□□ -1.44
RTN4-213ENST00000485749 ARMC5Q96C12 935 aa6.05□□□□□ -1.44
RTN4-213ENST00000485749 PARP3Q9Y6F1 533 aa6.05□□□□□ -1.44
RTN4-213ENST00000485749 LILRB5O75023 590 aa6.04□□□□□ -1.44
RTN4-213ENST00000485749 ADH7P40394 386 aa6.04□□□□□ -1.44
RTN4-213ENST00000485749 NRG1Q02297 640 aaPredicted RBP6.04□□□□□ -1.44
RTN4-213ENST00000485749 RAD51AP2Q09MP3 1159 aa6.04□□□□□ -1.44
RTN4-213ENST00000485749 SPEM2Q0P670 501 aa6.04□□□□□ -1.44
RTN4-213ENST00000485749 PDE3BQ13370 1112 aa6.04□□□□□ -1.44
RTN4-213ENST00000485749 MTMR3Q13615 1198 aa6.04□□□□□ -1.44
RTN4-213ENST00000485749 RSPO4Q2I0M5 234 aaPredicted RBP6.04□□□□□ -1.44
RTN4-213ENST00000485749 CAPN12Q6ZSI9 719 aa6.04□□□□□ -1.44
RTN4-213ENST00000485749 STAG2Q8N3U4 1231 aa6.04□□□□□ -1.44
RTN4-213ENST00000485749 ALKBH8Q96BT7 664 aaKnown RBP6.04□□□□□ -1.44
RTN4-213ENST00000485749 CEP63Q96MT8 703 aa6.04□□□□□ -1.44
RTN4-213ENST00000485749 PSMG3-AS1Q96PY0 264 aa6.04□□□□□ -1.44
RTN4-213ENST00000485749 TGIF2Q9GZN2 237 aa6.04□□□□□ -1.44
RTN4-213ENST00000485749 BRD7Q9NPI1 651 aa6.04□□□□□ -1.44
RTN4-213ENST00000485749 STRN4Q9NRL3 753 aa6.04□□□□□ -1.44
RTN4-213ENST00000485749 NLRP2Q9NX02 1062 aa6.04□□□□□ -1.44
RTN4-213ENST00000485749 USP3Q9Y6I4 520 aa6.04□□□□□ -1.44
RTN4-213ENST00000485749 HIRAP54198 1017 aaPredicted RBP6.03□□□□□ -1.44
RTN4-213ENST00000485749 KCNQ4P56696 695 aa6.03□□□□□ -1.44
RTN4-213ENST00000485749 RAC1P63000 192 aa6.03□□□□□ -1.44
RTN4-213ENST00000485749 DAB2P98082 770 aa6.03□□□□□ -1.44
RTN4-213ENST00000485749 NBPF11Q86T75 865 aa6.03□□□□□ -1.44
RTN4-213ENST00000485749 NOP9Q86U38 636 aaKnown RBP6.03□□□□□ -1.44
RTN4-213ENST00000485749 METTL16Q86W50 562 aaKnown RBP6.03□□□□□ -1.44
RTN4-213ENST00000485749 MICALL1Q8N3F8 863 aa6.03□□□□□ -1.44
RTN4-213ENST00000485749 TMEM87AQ8NBN3 555 aa6.03□□□□□ -1.44
RTN4-213ENST00000485749 ZDHHC1Q8WTX9 485 aa6.03□□□□□ -1.44
RTN4-213ENST00000485749 MDFIQ99750 246 aa6.03□□□□□ -1.44
RTN4-213ENST00000485749 MRS2Q9HD23 443 aa6.03□□□□□ -1.44
RTN4-213ENST00000485749 PPP1R1BQ9UD71 204 aaPredicted RBP6.03□□□□□ -1.44
RTN4-213ENST00000485749 PARP2Q9UGN5 583 aa6.03□□□□□ -1.44
RTN4-213ENST00000485749 KCNH4Q9UQ05 1017 aa6.03□□□□□ -1.44
RTN4-213ENST00000485749 TPD52L2O43399 206 aaKnown RBP6.02□□□□□ -1.45
RTN4-213ENST00000485749 DYRK3O43781 588 aa6.02□□□□□ -1.45
RTN4-213ENST00000485749 SORBS3O60504 671 aa6.02□□□□□ -1.45
RTN4-213ENST00000485749 LDHBP07195 334 aaKnown RBP6.02□□□□□ -1.45
RTN4-213ENST00000485749 NAA30Q147X3 362 aaPredicted RBP6.02□□□□□ -1.45
RTN4-213ENST00000485749 NKAPLQ5M9Q1 402 aa6.02□□□□□ -1.45
RTN4-213ENST00000485749 TRAPPC3LQ5T215 181 aa6.02□□□□□ -1.45
RTN4-213ENST00000485749 C16orf46Q6P387 395 aa6.02□□□□□ -1.45
RTN4-213ENST00000485749 TNS4Q8IZW8 715 aa6.02□□□□□ -1.45
RTN4-213ENST00000485749 RNF34Q969K3 372 aa6.02□□□□□ -1.45
RTN4-213ENST00000485749 VTI1AQ96AJ9 217 aa6.02□□□□□ -1.45
RTN4-213ENST00000485749 FAM129BQ96TA1 746 aa6.02□□□□□ -1.45
RTN4-213ENST00000485749 TPSG1Q9NRR2 321 aa6.02□□□□□ -1.45
RTN4-213ENST00000485749 HCN2Q9UL51 889 aa6.02□□□□□ -1.45
RTN4-213ENST00000485749 ATAD2Q6PL18 1390 aa6.02□□□□□ -1.45
RTN4-213ENST00000485749 IGHA2P01877 340 aa6.01□□□□□ -1.45
RTN4-213ENST00000485749 H2AFB1P0C5Y9 115 aa6.01□□□□□ -1.45
RTN4-213ENST00000485749 H2AFB2P0C5Z0 115 aa6.01□□□□□ -1.45
RTN4-213ENST00000485749 ELNP15502 786 aa6.01□□□□□ -1.45
RTN4-213ENST00000485749 MPSTP25325 297 aa6.01□□□□□ -1.45
RTN4-213ENST00000485749 EPHA4P54764 986 aa6.01□□□□□ -1.45
RTN4-213ENST00000485749 ATP2B2Q01814 1243 aa6.01□□□□□ -1.45
RTN4-213ENST00000485749 EHHADHQ08426 723 aa6.01□□□□□ -1.45
RTN4-213ENST00000485749 FAM50AQ14320 339 aaKnown RBP6.01□□□□□ -1.45
RTN4-213ENST00000485749 PCSK7Q16549 785 aa6.01□□□□□ -1.45
RTN4-213ENST00000485749 NT5DC4Q86YG4 428 aa6.01□□□□□ -1.45
RTN4-213ENST00000485749 SCG3Q8WXD2 468 aaKnown RBP6.01□□□□□ -1.45
RTN4-213ENST00000485749 FRMD6Q96NE9 622 aa6.01□□□□□ -1.45
RTN4-213ENST00000485749 ZFP64Q9NPA5 681 aa6.01□□□□□ -1.45
RTN4-213ENST00000485749 ALBP02768 609 aa6□□□□□ -1.45
RTN4-213ENST00000485749 EIF1AXP47813 144 aaKnown RBP6□□□□□ -1.45
RTN4-213ENST00000485749 FANCCQ00597 558 aa6□□□□□ -1.45
RTN4-213ENST00000485749 SFSWAPQ12872 951 aaKnown RBP6□□□□□ -1.45
RTN4-213ENST00000485749 GNL2Q13823 731 aaKnown RBP6□□□□□ -1.45
RTN4-213ENST00000485749 SPTY2D1Q68D10 685 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms