RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 PLEKHF1Q96S99 279 aa16.06■□□□□ 0.16
SSR4-210ENST00000485612 CFHR5Q9BXR6 569 aa16.06■□□□□ 0.16
SSR4-210ENST00000485612 POLLQ9UGP5 575 aa16.06■□□□□ 0.16
SSR4-210ENST00000485612 TRIM17Q9Y577 477 aa16.06■□□□□ 0.16
SSR4-210ENST00000485612 EIF4A1P60842 406 aaKnown RBP16.05■□□□□ 0.16
SSR4-210ENST00000485612 EYA3Q99504 573 aa16.05■□□□□ 0.16
SSR4-210ENST00000485612 PAPPA2Q9BXP8 1791 aa16.05■□□□□ 0.16
SSR4-210ENST00000485612 EN2P19622 333 aaPredicted RBP16.04■□□□□ 0.16
SSR4-210ENST00000485612 ZNF280AP59817 542 aaPredicted RBP16.04■□□□□ 0.16
SSR4-210ENST00000485612 TTLL12Q14166 644 aaPredicted RBP16.04■□□□□ 0.16
SSR4-210ENST00000485612 TRMT112Q9UI30 125 aaKnown RBP16.04■□□□□ 0.16
SSR4-210ENST00000485612 GPSM2P81274 684 aa16.03■□□□□ 0.16
SSR4-210ENST00000485612 NFE2L2Q16236 605 aa16.03■□□□□ 0.16
SSR4-210ENST00000485612 NLRP10Q86W26 655 aa16.03■□□□□ 0.16
SSR4-210ENST00000485612 SCAF8Q9UPN6 1271 aaKnown RBP16.03■□□□□ 0.16
SSR4-210ENST00000485612 ERBB4Q15303 1308 aa16.02■□□□□ 0.16
SSR4-210ENST00000485612 PITPNM2Q9BZ72 1349 aa16.02■□□□□ 0.16
SSR4-210ENST00000485612 PRAMEF18Q5VWM3 479 aa16.02■□□□□ 0.16
SSR4-210ENST00000485612 OTOP1Q7RTM1 612 aa16.02■□□□□ 0.16
SSR4-210ENST00000485612 SH3TC1Q8TE82 1336 aa16.01■□□□□ 0.15
SSR4-210ENST00000485612 G3V3G9 751 aa16.01■□□□□ 0.15
SSR4-210ENST00000485612 ALDH1A1P00352 501 aa16.01■□□□□ 0.15
SSR4-210ENST00000485612 HSP90AB3PQ58FF7 597 aa16.01■□□□□ 0.15
SSR4-210ENST00000485612 DCAF8Q5TAQ9 597 aa16.01■□□□□ 0.15
SSR4-210ENST00000485612 SLC17A8Q8NDX2 589 aa16.01■□□□□ 0.15
SSR4-210ENST00000485612 AGBL3Q8NEM8 1001 aa16.01■□□□□ 0.15
SSR4-210ENST00000485612 TBC1D16Q8TBP0 767 aa16.01■□□□□ 0.15
SSR4-210ENST00000485612 CELF1Q92879 486 aaKnown RBP16.01■□□□□ 0.15
SSR4-210ENST00000485612 ZC3H12CQ9C0D7 883 aaKnown RBP16.01■□□□□ 0.15
SSR4-210ENST00000485612 DDX60Q8IY21 1712 aaKnown RBP16■□□□□ 0.15
SSR4-210ENST00000485612 TCIRG1Q13488 830 aa16■□□□□ 0.15
SSR4-210ENST00000485612 RSBN1LQ6PCB5 846 aaPredicted RBP16■□□□□ 0.15
SSR4-210ENST00000485612 LRP10Q7Z4F1 713 aa16■□□□□ 0.15
SSR4-210ENST00000485612 MYOZ2Q9NPC6 264 aa16■□□□□ 0.15
SSR4-210ENST00000485612 PTPN22Q9Y2R2 807 aa16■□□□□ 0.15
SSR4-210ENST00000485612 NEFMP07197 916 aa15.99■□□□□ 0.15
SSR4-210ENST00000485612 USP17L8P0C7I0 530 aa15.99■□□□□ 0.15
SSR4-210ENST00000485612 NECTIN2Q92692 538 aa15.99■□□□□ 0.15
SSR4-210ENST00000485612 TMEM106CQ9BVX2 250 aa15.99■□□□□ 0.15
SSR4-210ENST00000485612 HTTP42858 3142 aa15.99■□□□□ 0.15
SSR4-210ENST00000485612 MAPK8IP3Q9UPT6 1336 aa15.98■□□□□ 0.15
SSR4-210ENST00000485612 LRRC37AA6NMS7 1700 aa15.98■□□□□ 0.15
SSR4-210ENST00000485612 EIF2S2P20042 333 aaKnown RBP15.98■□□□□ 0.15
SSR4-210ENST00000485612 NF2P35240 595 aa15.98■□□□□ 0.15
SSR4-210ENST00000485612 CENPFP49454 3210 aa15.98■□□□□ 0.15
SSR4-210ENST00000485612 PTPN12Q05209 780 aaKnown RBP15.98■□□□□ 0.15
SSR4-210ENST00000485612 PDIA6Q15084 440 aa15.98■□□□□ 0.15
SSR4-210ENST00000485612 ZNF428Q96B54 188 aa15.98■□□□□ 0.15
SSR4-210ENST00000485612 ARMC5Q96C12 935 aa15.98■□□□□ 0.15
SSR4-210ENST00000485612 OTUD5Q96G74 571 aa15.98■□□□□ 0.15
SSR4-210ENST00000485612 SZT2Q5T011 3432 aa15.97■□□□□ 0.15
SSR4-210ENST00000485612 ANXA1P04083 346 aa15.97■□□□□ 0.15
SSR4-210ENST00000485612 SF3B3Q15393 1217 aaKnown RBP15.97■□□□□ 0.15
SSR4-210ENST00000485612 PROSER3Q2NL68 480 aa15.97■□□□□ 0.15
SSR4-210ENST00000485612 BRCA2P51587 3418 aa15.97■□□□□ 0.15
SSR4-210ENST00000485612 H0YGN5 161 aa15.96■□□□□ 0.15
SSR4-210ENST00000485612 AIMP1Q12904 312 aaKnown RBP15.96■□□□□ 0.15
SSR4-210ENST00000485612 SPRYD7Q5W111 196 aa15.96■□□□□ 0.15
SSR4-210ENST00000485612 COPS6Q7L5N1 327 aa15.96■□□□□ 0.15
SSR4-210ENST00000485612 ARMC9Q7Z3E5 817 aa15.96■□□□□ 0.15
SSR4-210ENST00000485612 ERO1AQ96HE7 468 aa15.96■□□□□ 0.15
SSR4-210ENST00000485612 GMLQ99445 158 aa15.96■□□□□ 0.15
SSR4-210ENST00000485612 INHBEP58166 350 aa15.95■□□□□ 0.14
SSR4-210ENST00000485612 PRKG1Q13976 671 aa15.95■□□□□ 0.14
SSR4-210ENST00000485612 NBPF9Q3BBW0 867 aa15.95■□□□□ 0.14
SSR4-210ENST00000485612 IFNL1Q8IU54 200 aa15.95■□□□□ 0.14
SSR4-210ENST00000485612 TSPYL4Q9UJ04 414 aa15.95■□□□□ 0.14
SSR4-210ENST00000485612 ZNF609O15014 1411 aa15.94■□□□□ 0.14
SSR4-210ENST00000485612 MANSC4A6NHS7 340 aaPredicted RBP15.94■□□□□ 0.14
SSR4-210ENST00000485612 UFL1O94874 794 aa15.94■□□□□ 0.14
SSR4-210ENST00000485612 RPS8P62241 208 aaKnown RBP15.94■□□□□ 0.14
SSR4-210ENST00000485612 CD99L2Q8TCZ2 262 aa15.94■□□□□ 0.14
SSR4-210ENST00000485612 XAGE3Q8WTP9 111 aa15.94■□□□□ 0.14
SSR4-210ENST00000485612 EFCC1Q9HA90 598 aa15.94■□□□□ 0.14
SSR4-210ENST00000485612 PODXL2Q9NZ53 605 aa15.94■□□□□ 0.14
SSR4-210ENST00000485612 ANKIB1Q9P2G1 1089 aa15.94■□□□□ 0.14
SSR4-210ENST00000485612 RBBP6Q7Z6E9 1792 aaKnown RBP15.94■□□□□ 0.14
SSR4-210ENST00000485612 SCN9AQ15858 1988 aa15.94■□□□□ 0.14
SSR4-210ENST00000485612 RIPK4P57078 832 aa15.93■□□□□ 0.14
SSR4-210ENST00000485612 CHRDL2Q6WN34 429 aa15.93■□□□□ 0.14
SSR4-210ENST00000485612 GGA1Q9UJY5 639 aa15.93■□□□□ 0.14
SSR4-210ENST00000485612 USP17L3A6NCW0 530 aa15.92■□□□□ 0.14
SSR4-210ENST00000485612 USP17L4A6NCW7 530 aa15.92■□□□□ 0.14
SSR4-210ENST00000485612 LDLRAD1Q5T700 205 aa15.92■□□□□ 0.14
SSR4-210ENST00000485612 USP17L1Q7RTZ2 530 aa15.92■□□□□ 0.14
SSR4-210ENST00000485612 FAM89AQ96GI7 184 aa15.92■□□□□ 0.14
SSR4-210ENST00000485612 COL4A1P02462 1669 aa15.92■□□□□ 0.14
SSR4-210ENST00000485612 TMPOP42166 694 aaKnown RBP15.91■□□□□ 0.14
SSR4-210ENST00000485612 SLC4A8Q2Y0W8 1093 aa15.91■□□□□ 0.14
SSR4-210ENST00000485612 SLC10A4Q96EP9 437 aa15.91■□□□□ 0.14
SSR4-210ENST00000485612 ZNF333Q96JL9 665 aa15.91■□□□□ 0.14
SSR4-210ENST00000485612 PNNQ9H307 717 aaKnown RBP15.91■□□□□ 0.14
SSR4-210ENST00000485612 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.91■□□□□ 0.14
SSR4-210ENST00000485612 ANGEL1Q9UNK9 670 aaKnown RBP15.91■□□□□ 0.14
SSR4-210ENST00000485612 IGF2BP3O00425 579 aaKnown RBP eCLIP15.9■□□□□ 0.14
SSR4-210ENST00000485612 WNT10BO00744 389 aa15.9■□□□□ 0.14
SSR4-210ENST00000485612 SP3Q02447 781 aa15.9■□□□□ 0.14
SSR4-210ENST00000485612 KRT24Q2M2I5 525 aa15.9■□□□□ 0.14
SSR4-210ENST00000485612 PODNQ7Z5L7 613 aa15.9■□□□□ 0.14
SSR4-210ENST00000485612 NBPF11Q86T75 865 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms