RNA–Protein interactions for RNA: ENST00000484910.1

RD3-202, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

TSL 1 (best)

Gene RD3, Length 3,070 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-202ENST00000484910 MTX1Q13505 466 aa13.52□□□□□ -0.24
RD3-202ENST00000484910 LIG1P18858 919 aa13.52□□□□□ -0.25
RD3-202ENST00000484910 DMTNQ08495 405 aa13.52□□□□□ -0.25
RD3-202ENST00000484910 MAP3K11Q16584 847 aa13.52□□□□□ -0.25
RD3-202ENST00000484910 HSP90AB3PQ58FF7 597 aa13.52□□□□□ -0.25
RD3-202ENST00000484910 TTC6Q86TZ1 520 aa13.52□□□□□ -0.25
RD3-202ENST00000484910 ZNF589Q86UQ0 364 aaPredicted RBP13.52□□□□□ -0.25
RD3-202ENST00000484910 BICD2Q8TD16 824 aa13.52□□□□□ -0.25
RD3-202ENST00000484910 C16orf45Q96MC5 204 aaPredicted RBP13.52□□□□□ -0.25
RD3-202ENST00000484910 TNMDQ9H2S6 317 aa13.52□□□□□ -0.25
RD3-202ENST00000484910 KCNF1Q9H3M0 494 aa13.52□□□□□ -0.25
RD3-202ENST00000484910 RBM8AQ9Y5S9 174 aaKnown RBP13.52□□□□□ -0.25
RD3-202ENST00000484910 PHRF1Q9P1Y6 1649 aaKnown RBP13.51□□□□□ -0.25
RD3-202ENST00000484910 RIOK3O14730 519 aaKnown RBP13.51□□□□□ -0.25
RD3-202ENST00000484910 ZBTB22O15209 634 aa13.51□□□□□ -0.25
RD3-202ENST00000484910 KCNQ4P56696 695 aa13.51□□□□□ -0.25
RD3-202ENST00000484910 ERC1Q8IUD2 1116 aa13.51□□□□□ -0.25
RD3-202ENST00000484910 PLBD2Q8NHP8 589 aa13.51□□□□□ -0.25
RD3-202ENST00000484910 TRIM5Q9C035 493 aa13.51□□□□□ -0.25
RD3-202ENST00000484910 DACT1Q9NYF0 836 aa13.51□□□□□ -0.25
RD3-202ENST00000484910 TBC1D2BQ9UPU7 963 aa13.51□□□□□ -0.25
RD3-202ENST00000484910 CEBPZQ03701 1054 aaKnown RBP13.51□□□□□ -0.25
RD3-202ENST00000484910 TPCN1Q9ULQ1 816 aa13.51□□□□□ -0.25
RD3-202ENST00000484910 LMTK3Q96Q04 1460 aa13.51□□□□□ -0.25
RD3-202ENST00000484910 GOLGB1Q14789 3259 aaKnown RBP13.51□□□□□ -0.25
RD3-202ENST00000484910 VPS53Q5VIR6 699 aa13.5□□□□□ -0.25
RD3-202ENST00000484910 PDCL2Q8N4E4 241 aa13.5□□□□□ -0.25
RD3-202ENST00000484910 CARD10Q9BWT7 1032 aa13.5□□□□□ -0.25
RD3-202ENST00000484910 COL5A2P05997 1499 aaPredicted RBP13.5□□□□□ -0.25
RD3-202ENST00000484910 LRMPQ12912 555 aa13.5□□□□□ -0.25
RD3-202ENST00000484910 SMIM5Q71RC9 77 aa13.5□□□□□ -0.25
RD3-202ENST00000484910 ZNF592Q92610 1267 aa13.5□□□□□ -0.25
RD3-202ENST00000484910 SPATA32Q96LK8 384 aa13.5□□□□□ -0.25
RD3-202ENST00000484910 SH2B1Q9NRF2 756 aaPredicted RBP13.5□□□□□ -0.25
RD3-202ENST00000484910 CWC25Q9NXE8 425 aaPredicted RBP13.5□□□□□ -0.25
RD3-202ENST00000484910 OVOS2A0A0G2JMS6 1433 aa13.5□□□□□ -0.25
RD3-202ENST00000484910 TYRO3Q06418 890 aa13.5□□□□□ -0.25
RD3-202ENST00000484910 ANO6Q4KMQ2 910 aa13.5□□□□□ -0.25
RD3-202ENST00000484910 TNNI3KQ59H18 835 aa13.5□□□□□ -0.25
RD3-202ENST00000484910 CCDC186Q7Z3E2 898 aa13.5□□□□□ -0.25
RD3-202ENST00000484910 KIAA1524Q8TCG1 905 aa13.5□□□□□ -0.25
RD3-202ENST00000484910 ZSCAN31Q96LW9 406 aaPredicted RBP13.5□□□□□ -0.25
RD3-202ENST00000484910 LRRC2Q9BYS8 371 aa13.5□□□□□ -0.25
RD3-202ENST00000484910 FPGT-TNNI3KV9GXZ4 949 aa13.5□□□□□ -0.25
RD3-202ENST00000484910 DCCP43146 1447 aa13.49□□□□□ -0.25
RD3-202ENST00000484910 VGLL3A8MV65 326 aa13.49□□□□□ -0.25
RD3-202ENST00000484910 CREB3L3Q68CJ9 461 aa13.49□□□□□ -0.25
RD3-202ENST00000484910 TTC41PQ6P2S7 1318 aa13.49□□□□□ -0.25
RD3-202ENST00000484910 GOLIM4O00461 696 aa13.49□□□□□ -0.25
RD3-202ENST00000484910 HLFQ16534 295 aa13.49□□□□□ -0.25
RD3-202ENST00000484910 BLOC1S2Q6QNY1 142 aa13.49□□□□□ -0.25
RD3-202ENST00000484910 FAM200AQ8TCP9 573 aa13.49□□□□□ -0.25
RD3-202ENST00000484910 EVI5LQ96CN4 794 aa13.49□□□□□ -0.25
RD3-202ENST00000484910 FUCA2Q9BTY2 467 aa13.49□□□□□ -0.25
RD3-202ENST00000484910 COL18A1P39060 1754 aa13.49□□□□□ -0.25
RD3-202ENST00000484910 CCDC171Q6TFL3 1326 aa13.49□□□□□ -0.25
RD3-202ENST00000484910 HSP90B1P14625 803 aaKnown RBP13.48□□□□□ -0.25
RD3-202ENST00000484910 FBXW7Q969H0 707 aa13.48□□□□□ -0.25
RD3-202ENST00000484910 NRBP1Q9UHY1 535 aa13.48□□□□□ -0.25
RD3-202ENST00000484910 HDAC5Q9UQL6 1122 aa13.48□□□□□ -0.25
RD3-202ENST00000484910 CPDO75976 1380 aa13.48□□□□□ -0.25
RD3-202ENST00000484910 U2AF2P26368 475 aaKnown RBP eCLIP13.48□□□□□ -0.25
RD3-202ENST00000484910 RFX5P48382 616 aaPredicted RBP13.48□□□□□ -0.25
RD3-202ENST00000484910 ST3GAL1Q11201 340 aa13.48□□□□□ -0.25
RD3-202ENST00000484910 DDX11Q96FC9 970 aa13.48□□□□□ -0.25
RD3-202ENST00000484910 ZSWIM6Q9HCJ5 1215 aa13.48□□□□□ -0.25
RD3-202ENST00000484910 NAP1L2Q9ULW6 460 aaPredicted RBP13.48□□□□□ -0.25
RD3-202ENST00000484910 EPB41L2O43491 1005 aaKnown RBP13.48□□□□□ -0.25
RD3-202ENST00000484910 FKBP4Q02790 459 aaKnown RBP eCLIP13.48□□□□□ -0.25
RD3-202ENST00000484910 TAF7LQ5H9L4 462 aa13.48□□□□□ -0.25
RD3-202ENST00000484910 SPTLC3Q9NUV7 552 aa13.48□□□□□ -0.25
RD3-202ENST00000484910 SCN11AQ9UI33 1791 aa13.47□□□□□ -0.25
RD3-202ENST00000484910 FOXO4P98177 505 aa13.47□□□□□ -0.25
RD3-202ENST00000484910 ATG3Q9NT62 314 aa13.47□□□□□ -0.25
RD3-202ENST00000484910 MRVI1Q9Y6F6 885 aa13.47□□□□□ -0.25
RD3-202ENST00000484910 XIRP1Q702N8 1843 aaKnown RBP13.47□□□□□ -0.25
RD3-202ENST00000484910 A0A0G2JLW4 131 aa13.46□□□□□ -0.25
RD3-202ENST00000484910 ERVV-2B6SEH9 535 aa13.46□□□□□ -0.25
RD3-202ENST00000484910 PI16Q6UXB8 463 aa13.46□□□□□ -0.25
RD3-202ENST00000484910 DNAJC25Q9H1X3 360 aa13.46□□□□□ -0.25
RD3-202ENST00000484910 UTYO14607 1347 aa13.46□□□□□ -0.25
RD3-202ENST00000484910 H3BQV1 296 aa13.46□□□□□ -0.25
RD3-202ENST00000484910 GORABQ5T7V8 394 aa13.46□□□□□ -0.25
RD3-202ENST00000484910 IFFO2Q5TF58 517 aa13.46□□□□□ -0.25
RD3-202ENST00000484910 CBX8Q9HC52 389 aa13.46□□□□□ -0.25
RD3-202ENST00000484910 ZBTB1Q9Y2K1 713 aa13.46□□□□□ -0.25
RD3-202ENST00000484910 SNAP23O00161 211 aa13.45□□□□□ -0.26
RD3-202ENST00000484910 SLC27A2O14975 620 aa13.45□□□□□ -0.26
RD3-202ENST00000484910 PSMA5P28066 241 aa13.45□□□□□ -0.26
RD3-202ENST00000484910 HELBQ8NG08 1087 aaPredicted RBP13.45□□□□□ -0.26
RD3-202ENST00000484910 IL17RAQ96F46 866 aa13.45□□□□□ -0.26
RD3-202ENST00000484910 SLC4A9Q96Q91 983 aa13.45□□□□□ -0.26
RD3-202ENST00000484910 TPM3P06753 285 aa13.45□□□□□ -0.26
RD3-202ENST00000484910 PDCP20941 246 aa13.45□□□□□ -0.26
RD3-202ENST00000484910 NECTIN1Q15223 517 aa13.45□□□□□ -0.26
RD3-202ENST00000484910 FAM182BQ5T319 152 aa13.45□□□□□ -0.26
RD3-202ENST00000484910 RNF20Q5VTR2 975 aa13.45□□□□□ -0.26
RD3-202ENST00000484910 EXOC5O00471 708 aa13.45□□□□□ -0.26
RD3-202ENST00000484910 ADORA1P30542 326 aa13.45□□□□□ -0.26
RD3-202ENST00000484910 ZNF165P49910 485 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms