RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 R3HDM1Q15032 1099 aaKnown RBP25.09■■□□□ 1.61
VCPKMT-203ENST00000484763 ILDR2Q71H61 639 aa25.09■■□□□ 1.61
VCPKMT-203ENST00000484763 BSDC1Q9NW68 430 aaPredicted RBP25.09■■□□□ 1.61
VCPKMT-203ENST00000484763 TTC41PQ6P2S7 1318 aa25.09■■□□□ 1.61
VCPKMT-203ENST00000484763 PDE6BP35913 854 aa25.09■■□□□ 1.61
VCPKMT-203ENST00000484763 RPS8P62241 208 aaKnown RBP25.09■■□□□ 1.61
VCPKMT-203ENST00000484763 BMP2KLQ5H9B9 411 aa25.09■■□□□ 1.61
VCPKMT-203ENST00000484763 TTC22Q5TAA0 569 aa25.09■■□□□ 1.61
VCPKMT-203ENST00000484763 CCDC8Q9H0W5 538 aaPredicted RBP25.09■■□□□ 1.61
VCPKMT-203ENST00000484763 COL11A2P13942 1736 aaPredicted RBP25.09■■□□□ 1.61
VCPKMT-203ENST00000484763 GRAPQ13588 217 aa25.08■■□□□ 1.61
VCPKMT-203ENST00000484763 VGLL2Q8N8G2 317 aa25.08■■□□□ 1.61
VCPKMT-203ENST00000484763 GRAPLQ8TC17 118 aaPredicted RBP25.08■■□□□ 1.61
VCPKMT-203ENST00000484763 RBM17Q96I25 401 aaKnown RBP25.08■■□□□ 1.61
VCPKMT-203ENST00000484763 TLR7Q9NYK1 1049 aaKnown RBP25.07■■□□□ 1.6
VCPKMT-203ENST00000484763 TSHZ3Q63HK5 1081 aa25.07■■□□□ 1.6
VCPKMT-203ENST00000484763 A0A1B0GUL7 405 aa25.06■■□□□ 1.6
VCPKMT-203ENST00000484763 PDE8BO95263 885 aa25.06■■□□□ 1.6
VCPKMT-203ENST00000484763 HOXA10P31260 410 aaPredicted RBP25.06■■□□□ 1.6
VCPKMT-203ENST00000484763 ARAP2Q8WZ64 1704 aa25.06■■□□□ 1.6
VCPKMT-203ENST00000484763 ECHDC1Q9NTX5 307 aa25.06■■□□□ 1.6
VCPKMT-203ENST00000484763 DBNLQ9UJU6 430 aaKnown RBP25.06■■□□□ 1.6
VCPKMT-203ENST00000484763 GSPT1P15170 499 aaKnown RBP25.05■■□□□ 1.6
VCPKMT-203ENST00000484763 MTFR1LQ9H019 292 aa25.05■■□□□ 1.6
VCPKMT-203ENST00000484763 ERC2O15083 957 aa25.05■■□□□ 1.6
VCPKMT-203ENST00000484763 CHRNDQ07001 517 aa25.05■■□□□ 1.6
VCPKMT-203ENST00000484763 ATP2B3Q16720 1220 aa25.05■■□□□ 1.6
VCPKMT-203ENST00000484763 NEUROD6Q96NK8 337 aa25.05■■□□□ 1.6
VCPKMT-203ENST00000484763 ZBTB7AO95365 584 aa25.04■■□□□ 1.6
VCPKMT-203ENST00000484763 TIMM10P62072 90 aa25.04■■□□□ 1.6
VCPKMT-203ENST00000484763 PUM3Q15397 648 aaKnown RBP25.04■■□□□ 1.6
VCPKMT-203ENST00000484763 PI4K2BQ8TCG2 481 aa25.04■■□□□ 1.6
VCPKMT-203ENST00000484763 CRAMP1Q96RY5 1269 aa25.04■■□□□ 1.6
VCPKMT-203ENST00000484763 DBNDD2Q9BQY9 259 aa25.04■■□□□ 1.6
VCPKMT-203ENST00000484763 C10orf71Q711Q0 1435 aa25.03■■□□□ 1.6
VCPKMT-203ENST00000484763 GLRX3O76003 335 aaKnown RBP25.02■■□□□ 1.6
VCPKMT-203ENST00000484763 SRGNP10124 158 aa25.02■■□□□ 1.6
VCPKMT-203ENST00000484763 NPR1P16066 1061 aa25.02■■□□□ 1.6
VCPKMT-203ENST00000484763 HELBQ8NG08 1087 aaPredicted RBP25.02■■□□□ 1.6
VCPKMT-203ENST00000484763 MINPP1Q9UNW1 487 aa25.02■■□□□ 1.6
VCPKMT-203ENST00000484763 TAF5LO75529 589 aa25■■□□□ 1.59
VCPKMT-203ENST00000484763 POLD1P28340 1107 aa25■■□□□ 1.59
VCPKMT-203ENST00000484763 LPIN2Q92539 896 aa25■■□□□ 1.59
VCPKMT-203ENST00000484763 MASTLQ96GX5 879 aa25■■□□□ 1.59
VCPKMT-203ENST00000484763 KIF13BQ9NQT8 1826 aa25■■□□□ 1.59
VCPKMT-203ENST00000484763 LRRC37AA6NMS7 1700 aa25■■□□□ 1.59
VCPKMT-203ENST00000484763 PSDA5PKW4 1024 aaPredicted RBP25■■□□□ 1.59
VCPKMT-203ENST00000484763 FGFR2P21802 821 aa25■■□□□ 1.59
VCPKMT-203ENST00000484763 XAGE2Q96GT9 111 aa25■■□□□ 1.59
VCPKMT-203ENST00000484763 ANKRD2Q9GZV1 360 aa25■■□□□ 1.59
VCPKMT-203ENST00000484763 AK9Q5TCS8 1911 aa24.99■■□□□ 1.59
VCPKMT-203ENST00000484763 BBOX1O75936 387 aa24.99■■□□□ 1.59
VCPKMT-203ENST00000484763 SLC5A1P13866 664 aa24.99■■□□□ 1.59
VCPKMT-203ENST00000484763 C8orf34Q49A92 452 aa24.99■■□□□ 1.59
VCPKMT-203ENST00000484763 C2CD5Q86YS7 1000 aa24.99■■□□□ 1.59
VCPKMT-203ENST00000484763 H0YIN7 160 aa24.98■■□□□ 1.59
VCPKMT-203ENST00000484763 TMC4Q7Z404 712 aa24.98■■□□□ 1.59
VCPKMT-203ENST00000484763 ATF5Q9Y2D1 282 aaPredicted RBP24.98■■□□□ 1.59
VCPKMT-203ENST00000484763 DLEC1Q9Y238 1755 aa24.98■■□□□ 1.59
VCPKMT-203ENST00000484763 SDSP20132 328 aa24.98■■□□□ 1.59
VCPKMT-203ENST00000484763 ALDH1B1P30837 517 aa24.98■■□□□ 1.59
VCPKMT-203ENST00000484763 CACNA1SQ13698 1873 aa24.97■■□□□ 1.59
VCPKMT-203ENST00000484763 ATP5JP18859 108 aa24.97■■□□□ 1.59
VCPKMT-203ENST00000484763 ADORA1P30542 326 aa24.97■■□□□ 1.59
VCPKMT-203ENST00000484763 GORABQ5T7V8 394 aa24.97■■□□□ 1.59
VCPKMT-203ENST00000484763 IFIT1P09914 478 aaKnown RBP24.96■■□□□ 1.59
VCPKMT-203ENST00000484763 CCDC158Q5M9N0 1113 aa24.96■■□□□ 1.59
VCPKMT-203ENST00000484763 UBE4AQ14139 1066 aa24.96■■□□□ 1.59
VCPKMT-203ENST00000484763 STYK1Q6J9G0 422 aa24.96■■□□□ 1.59
VCPKMT-203ENST00000484763 TRIM6-TRIM34B2RNG4 842 aa24.95■■□□□ 1.58
VCPKMT-203ENST00000484763 PPEF1O14829 653 aaPredicted RBP24.95■■□□□ 1.58
VCPKMT-203ENST00000484763 BACH2Q9BYV9 841 aa24.95■■□□□ 1.58
VCPKMT-203ENST00000484763 ZNF622Q969S3 477 aaKnown RBP eCLIP24.94■■□□□ 1.58
VCPKMT-203ENST00000484763 SNAP23O00161 211 aa24.93■■□□□ 1.58
VCPKMT-203ENST00000484763 TTC39AQ5SRH9 613 aa24.93■■□□□ 1.58
VCPKMT-203ENST00000484763 CNTROBQ8N137 903 aa24.93■■□□□ 1.58
VCPKMT-203ENST00000484763 BOLA2Q9H3K6 86 aa24.93■■□□□ 1.58
VCPKMT-203ENST00000484763 XDHP47989 1333 aa24.93■■□□□ 1.58
VCPKMT-203ENST00000484763 CDC45O75419 566 aa24.93■■□□□ 1.58
VCPKMT-203ENST00000484763 KCNJ4P48050 445 aa24.93■■□□□ 1.58
VCPKMT-203ENST00000484763 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.93■■□□□ 1.58
VCPKMT-203ENST00000484763 RILPL2Q969X0 211 aa24.93■■□□□ 1.58
VCPKMT-203ENST00000484763 MAP4K4O95819 1239 aaPredicted RBP24.92■■□□□ 1.58
VCPKMT-203ENST00000484763 CHRNA5P30532 468 aa24.92■■□□□ 1.58
VCPKMT-203ENST00000484763 ANKIB1Q9P2G1 1089 aa24.92■■□□□ 1.58
VCPKMT-203ENST00000484763 SGIP1Q9BQI5 828 aa24.91■■□□□ 1.58
VCPKMT-203ENST00000484763 LTBP1Q14766 1721 aa24.91■■□□□ 1.58
VCPKMT-203ENST00000484763 SP8Q8IXZ3 490 aa24.91■■□□□ 1.58
VCPKMT-203ENST00000484763 CNKSR1Q969H4 720 aa24.91■■□□□ 1.58
VCPKMT-203ENST00000484763 HAUS7Q99871 368 aa24.91■■□□□ 1.58
VCPKMT-203ENST00000484763 ATP6V0A2Q9Y487 856 aa24.91■■□□□ 1.58
VCPKMT-203ENST00000484763 ZNF804BA4D1E1 1349 aa24.9■■□□□ 1.58
VCPKMT-203ENST00000484763 CCDC102BQ68D86 513 aa24.9■■□□□ 1.58
VCPKMT-203ENST00000484763 ZNF512BQ96KM6 892 aaPredicted RBP24.9■■□□□ 1.58
VCPKMT-203ENST00000484763 LEMD3Q9Y2U8 911 aa24.9■■□□□ 1.58
VCPKMT-203ENST00000484763 SLC51AQ86UW1 340 aa24.89■■□□□ 1.58
VCPKMT-203ENST00000484763 EVI5LQ96CN4 794 aa24.89■■□□□ 1.58
VCPKMT-203ENST00000484763 KIAA1551Q9HCM1 1747 aa24.89■■□□□ 1.57
VCPKMT-203ENST00000484763 GPSM2P81274 684 aa24.89■■□□□ 1.57
VCPKMT-203ENST00000484763 SLX4Q8IY92 1834 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms