RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 SMC5Q8IY18 1101 aa8.06□□□□□ -1.12
PDZRN3-209ENST00000484487 CHMP3Q9Y3E7 222 aa8.06□□□□□ -1.12
PDZRN3-209ENST00000484487 RTL9Q8NET4 1388 aa8.06□□□□□ -1.12
PDZRN3-209ENST00000484487 KDM2BQ8NHM5 1336 aa8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 AK9Q5TCS8 1911 aa8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 A0A1B0GUL6 1792 aa8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 DLEC1Q9Y238 1755 aa8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 PNMA6EA0A0J9YXQ4 647 aa8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 ANKRD18BA2A2Z9 1011 aa8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 POLRMTO00411 1230 aaKnown RBP8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 SURF6O75683 361 aaKnown RBP8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 MMP10P09238 476 aa8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 POTEJP0CG39 1038 aa8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 PLCG2P16885 1265 aa8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 G3BP1Q13283 466 aaKnown RBP eCLIP8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 OS9Q13438 667 aaPredicted RBP8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 SF3B3Q15393 1217 aaKnown RBP8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 TAF7LQ5H9L4 462 aa8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 EPHA10Q5JZY3 1008 aa8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 PRR5LQ6MZQ0 368 aa8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 NUTM1Q86Y26 1132 aa8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 TTLL11Q8NHH1 800 aa8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 COPRSQ9NQ92 184 aa8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 PDZRN3Q9UPQ7 1066 aa8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 NOP58Q9Y2X3 529 aaKnown RBP8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 TNRC6CQ9HCJ0 1690 aaKnown RBP8.05□□□□□ -1.12
PDZRN3-209ENST00000484487 HCLS1P14317 486 aaPredicted RBP8.04□□□□□ -1.12
PDZRN3-209ENST00000484487 POLD1P28340 1107 aa8.04□□□□□ -1.12
PDZRN3-209ENST00000484487 PDE6BP35913 854 aa8.04□□□□□ -1.12
PDZRN3-209ENST00000484487 DDR1Q08345 913 aa8.04□□□□□ -1.12
PDZRN3-209ENST00000484487 PDAP1Q13442 181 aaKnown RBP8.04□□□□□ -1.12
PDZRN3-209ENST00000484487 MAMSTRQ6ZN01 415 aa8.04□□□□□ -1.12
PDZRN3-209ENST00000484487 SYNE4Q8N205 404 aa8.04□□□□□ -1.12
PDZRN3-209ENST00000484487 CDC5LQ99459 802 aaKnown RBP8.04□□□□□ -1.12
PDZRN3-209ENST00000484487 BRIP1Q9BX63 1249 aa8.04□□□□□ -1.12
PDZRN3-209ENST00000484487 MTFR1LQ9H019 292 aa8.04□□□□□ -1.12
PDZRN3-209ENST00000484487 ABCC12Q96J65 1359 aa8.03□□□□□ -1.12
PDZRN3-209ENST00000484487 CIAO1O76071 339 aa8.03□□□□□ -1.12
PDZRN3-209ENST00000484487 ITGA6P23229 1130 aa8.03□□□□□ -1.12
PDZRN3-209ENST00000484487 IGHMBP2P38935 993 aaKnown RBP8.03□□□□□ -1.12
PDZRN3-209ENST00000484487 IL15P40933 162 aaPredicted RBP8.03□□□□□ -1.12
PDZRN3-209ENST00000484487 RFX5P48382 616 aaPredicted RBP8.03□□□□□ -1.12
PDZRN3-209ENST00000484487 MKRN3Q13064 507 aaKnown RBP8.03□□□□□ -1.12
PDZRN3-209ENST00000484487 R3HDM1Q15032 1099 aaKnown RBP8.03□□□□□ -1.12
PDZRN3-209ENST00000484487 FAM161AQ3B820 660 aa8.03□□□□□ -1.12
PDZRN3-209ENST00000484487 ANKRD45Q5TZF3 282 aa8.03□□□□□ -1.12
PDZRN3-209ENST00000484487 MSL1Q68DK7 614 aa8.03□□□□□ -1.12
PDZRN3-209ENST00000484487 DDX46Q7L014 1031 aaKnown RBP8.03□□□□□ -1.12
PDZRN3-209ENST00000484487 KIF1BPQ96EK5 621 aa8.03□□□□□ -1.12
PDZRN3-209ENST00000484487 LRRCC1Q9C099 1032 aa8.03□□□□□ -1.12
PDZRN3-209ENST00000484487 SCUBE2Q9NQ36 999 aa8.03□□□□□ -1.12
PDZRN3-209ENST00000484487 MYH13Q9UKX3 1938 aa8.02□□□□□ -1.13
PDZRN3-209ENST00000484487 EYA2O00167 538 aa8.02□□□□□ -1.13
PDZRN3-209ENST00000484487 NUCB1Q02818 461 aa8.02□□□□□ -1.13
PDZRN3-209ENST00000484487 PTPN12Q05209 780 aaKnown RBP8.02□□□□□ -1.13
PDZRN3-209ENST00000484487 LDHAL6AQ6ZMR3 332 aa8.02□□□□□ -1.13
PDZRN3-209ENST00000484487 CHD1LQ86WJ1 897 aa8.02□□□□□ -1.13
PDZRN3-209ENST00000484487 RPGRQ92834 1020 aaKnown RBP8.02□□□□□ -1.13
PDZRN3-209ENST00000484487 RBM17Q96I25 401 aaKnown RBP8.02□□□□□ -1.13
PDZRN3-209ENST00000484487 MPHOSPH8Q99549 860 aa8.02□□□□□ -1.13
PDZRN3-209ENST00000484487 GREM2Q9H772 168 aa8.02□□□□□ -1.13
PDZRN3-209ENST00000484487 CNNM1Q9NRU3 951 aa8.02□□□□□ -1.13
PDZRN3-209ENST00000484487 EXOC6BQ9Y2D4 811 aa8.02□□□□□ -1.13
PDZRN3-209ENST00000484487 COL11A2P13942 1736 aaPredicted RBP8.02□□□□□ -1.13
PDZRN3-209ENST00000484487 ARAP2Q8WZ64 1704 aa8.01□□□□□ -1.13
PDZRN3-209ENST00000484487 LRP5O75197 1615 aa8.01□□□□□ -1.13
PDZRN3-209ENST00000484487 KLRG2A4D1S0 409 aaPredicted RBP8.01□□□□□ -1.13
PDZRN3-209ENST00000484487 H0YIN7 160 aa8.01□□□□□ -1.13
PDZRN3-209ENST00000484487 ALDH1B1P30837 517 aa8.01□□□□□ -1.13
PDZRN3-209ENST00000484487 HOXA10P31260 410 aaPredicted RBP8.01□□□□□ -1.13
PDZRN3-209ENST00000484487 CRY2Q49AN0 593 aa8.01□□□□□ -1.13
PDZRN3-209ENST00000484487 TMC4Q7Z404 712 aa8.01□□□□□ -1.13
PDZRN3-209ENST00000484487 ANKRD18AQ8IVF6 992 aa8.01□□□□□ -1.13
PDZRN3-209ENST00000484487 CLASRPQ8N2M8 674 aaKnown RBP8.01□□□□□ -1.13
PDZRN3-209ENST00000484487 RHPN1Q8TCX5 695 aa8.01□□□□□ -1.13
PDZRN3-209ENST00000484487 CCDC85AQ96PX6 553 aaPredicted RBP8.01□□□□□ -1.13
PDZRN3-209ENST00000484487 CRAMP1Q96RY5 1269 aa8.01□□□□□ -1.13
PDZRN3-209ENST00000484487 SIL1Q9H173 461 aa8.01□□□□□ -1.13
PDZRN3-209ENST00000484487 AKAP2Q9Y2D5 859 aa8.01□□□□□ -1.13
PDZRN3-209ENST00000484487 MROH5Q6ZUA9 1318 aa8.01□□□□□ -1.13
PDZRN3-209ENST00000484487 BRCA1P38398 1863 aaKnown RBP8□□□□□ -1.13
PDZRN3-209ENST00000484487 APBB1O00213 710 aa8□□□□□ -1.13
PDZRN3-209ENST00000484487 BBOX1O75936 387 aa8□□□□□ -1.13
PDZRN3-209ENST00000484487 NPR1P16066 1061 aa8□□□□□ -1.13
PDZRN3-209ENST00000484487 RPS8P62241 208 aaKnown RBP8□□□□□ -1.13
PDZRN3-209ENST00000484487 IRX5P78411 483 aaPredicted RBP8□□□□□ -1.13
PDZRN3-209ENST00000484487 MASTLQ96GX5 879 aa8□□□□□ -1.13
PDZRN3-209ENST00000484487 PDGFDQ9GZP0 370 aaPredicted RBP8□□□□□ -1.13
PDZRN3-209ENST00000484487 TMX4Q9H1E5 349 aaPredicted RBP8□□□□□ -1.13
PDZRN3-209ENST00000484487 OCEL1Q9H607 264 aa8□□□□□ -1.13
PDZRN3-209ENST00000484487 GPR108Q9NPR9 543 aa8□□□□□ -1.13
PDZRN3-209ENST00000484487 CEP126Q9P2H0 1117 aa8□□□□□ -1.13
PDZRN3-209ENST00000484487 PA2G4Q9UQ80 394 aaKnown RBP8□□□□□ -1.13
PDZRN3-209ENST00000484487 LRRC37AA6NMS7 1700 aa8□□□□□ -1.13
PDZRN3-209ENST00000484487 CHD4Q14839 1912 aa7.99□□□□□ -1.13
PDZRN3-209ENST00000484487 PSDA5PKW4 1024 aaPredicted RBP7.99□□□□□ -1.13
PDZRN3-209ENST00000484487 ZBTB7AO95365 584 aa7.99□□□□□ -1.13
PDZRN3-209ENST00000484487 SRGNP10124 158 aa7.99□□□□□ -1.13
PDZRN3-209ENST00000484487 GRAPQ13588 217 aa7.99□□□□□ -1.13
PDZRN3-209ENST00000484487 METTL24Q5JXM2 366 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms