RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 FKBP5Q13451 457 aaPredicted RBP15.26■□□□□ 0.03
SNRNP200-206ENST00000484372 COL13A1Q5TAT6 717 aaPredicted RBP15.26■□□□□ 0.03
SNRNP200-206ENST00000484372 DIEXFQ68CQ4 756 aaKnown RBP15.26■□□□□ 0.03
SNRNP200-206ENST00000484372 PAXIP1Q6ZW49 1069 aaPredicted RBP15.26■□□□□ 0.03
SNRNP200-206ENST00000484372 MYH16Q9H6N6 1097 aa15.26■□□□□ 0.03
SNRNP200-206ENST00000484372 LTBP1Q14766 1721 aa15.26■□□□□ 0.03
SNRNP200-206ENST00000484372 XDHP47989 1333 aa15.25■□□□□ 0.03
SNRNP200-206ENST00000484372 NEURL1BA8MQ27 555 aa15.25■□□□□ 0.03
SNRNP200-206ENST00000484372 PSMD14O00487 310 aa15.25■□□□□ 0.03
SNRNP200-206ENST00000484372 IGKV5-2P06315 115 aa15.25■□□□□ 0.03
SNRNP200-206ENST00000484372 FLIIQ13045 1269 aa15.25■□□□□ 0.03
SNRNP200-206ENST00000484372 DOK7Q18PE1 504 aa15.25■□□□□ 0.03
SNRNP200-206ENST00000484372 CDC37L1Q7L3B6 337 aa15.25■□□□□ 0.03
SNRNP200-206ENST00000484372 MICALL2Q8IY33 904 aa15.25■□□□□ 0.03
SNRNP200-206ENST00000484372 TNS4Q8IZW8 715 aa15.25■□□□□ 0.03
SNRNP200-206ENST00000484372 DUOX1Q9NRD9 1551 aa15.24■□□□□ 0.03
SNRNP200-206ENST00000484372 ATP2B4P23634 1241 aa15.24■□□□□ 0.03
SNRNP200-206ENST00000484372 CWF19L2Q2TBE0 894 aaKnown RBP15.24■□□□□ 0.03
SNRNP200-206ENST00000484372 FAM9BQ8IZU0 186 aa15.24■□□□□ 0.03
SNRNP200-206ENST00000484372 PGAP2Q9UHJ9 254 aa15.24■□□□□ 0.03
SNRNP200-206ENST00000484372 ZBTB12Q9Y330 459 aaPredicted RBP15.24■□□□□ 0.03
SNRNP200-206ENST00000484372 WDR33Q9C0J8 1336 aaKnown RBP15.23■□□□□ 0.03
SNRNP200-206ENST00000484372 IGHMBP2P38935 993 aaKnown RBP15.23■□□□□ 0.03
SNRNP200-206ENST00000484372 MAP2K1Q02750 393 aaPredicted RBP15.23■□□□□ 0.03
SNRNP200-206ENST00000484372 G2E3Q7L622 706 aa15.23■□□□□ 0.03
SNRNP200-206ENST00000484372 UBE3BQ7Z3V4 1068 aa15.23■□□□□ 0.03
SNRNP200-206ENST00000484372 TTLL11Q8NHH1 800 aa15.23■□□□□ 0.03
SNRNP200-206ENST00000484372 DNAAF4Q8WXU2 420 aa15.23■□□□□ 0.03
SNRNP200-206ENST00000484372 H7C1W4 665 aa15.22■□□□□ 0.03
SNRNP200-206ENST00000484372 TRAF5O00463 557 aa15.22■□□□□ 0.03
SNRNP200-206ENST00000484372 VAMP4O75379 141 aa15.22■□□□□ 0.03
SNRNP200-206ENST00000484372 CELF2O95319 508 aaKnown RBP15.22■□□□□ 0.03
SNRNP200-206ENST00000484372 EXOSC9Q06265 439 aaKnown RBP15.22■□□□□ 0.03
SNRNP200-206ENST00000484372 LINS1Q8NG48 757 aa15.22■□□□□ 0.03
SNRNP200-206ENST00000484372 TRPM4Q8TD43 1214 aa15.22■□□□□ 0.03
SNRNP200-206ENST00000484372 BEGAINQ9BUH8 593 aa15.22■□□□□ 0.03
SNRNP200-206ENST00000484372 GLIS2Q9BZE0 524 aaPredicted RBP15.22■□□□□ 0.03
SNRNP200-206ENST00000484372 BSDC1Q9NW68 430 aaPredicted RBP15.22■□□□□ 0.03
SNRNP200-206ENST00000484372 VIL1P09327 827 aaKnown RBP15.21■□□□□ 0.03
SNRNP200-206ENST00000484372 CTCFP49711 727 aaPredicted RBP15.21■□□□□ 0.03
SNRNP200-206ENST00000484372 HIRAP54198 1017 aaPredicted RBP15.21■□□□□ 0.03
SNRNP200-206ENST00000484372 GCKRQ14397 625 aa15.21■□□□□ 0.03
SNRNP200-206ENST00000484372 DCPSQ96C86 337 aaKnown RBP15.21■□□□□ 0.03
SNRNP200-206ENST00000484372 GPR101Q96P66 508 aaPredicted RBP15.21■□□□□ 0.03
SNRNP200-206ENST00000484372 GREM2Q9H772 168 aa15.21■□□□□ 0.03
SNRNP200-206ENST00000484372 ZNF408Q9H9D4 720 aa15.21■□□□□ 0.03
SNRNP200-206ENST00000484372 TLL2Q9Y6L7 1015 aa15.21■□□□□ 0.03
SNRNP200-206ENST00000484372 RTL9Q8NET4 1388 aa15.21■□□□□ 0.02
SNRNP200-206ENST00000484372 FMR1Q06787 632 aaKnown RBP eCLIP15.2■□□□□ 0.023e-7■■■□□ 15
SNRNP200-206ENST00000484372 GRM1Q13255 1194 aa15.2■□□□□ 0.02
SNRNP200-206ENST00000484372 TBC1D10BQ4KMP7 808 aaPredicted RBP15.2■□□□□ 0.02
SNRNP200-206ENST00000484372 RBM26Q5T8P6 1007 aaKnown RBP15.2■□□□□ 0.02
SNRNP200-206ENST00000484372 CST9Q5W186 159 aa15.2■□□□□ 0.02
SNRNP200-206ENST00000484372 SAMD7Q7Z3H4 446 aa15.2■□□□□ 0.02
SNRNP200-206ENST00000484372 PODNQ7Z5L7 613 aa15.2■□□□□ 0.02
SNRNP200-206ENST00000484372 CAPNS2Q96L46 248 aa15.2■□□□□ 0.02
SNRNP200-206ENST00000484372 MPHOSPH8Q99549 860 aa15.2■□□□□ 0.02
SNRNP200-206ENST00000484372 PLA2G12BQ9BX93 195 aa15.2■□□□□ 0.02
SNRNP200-206ENST00000484372 WBP1LQ9NX94 342 aa15.2■□□□□ 0.02
SNRNP200-206ENST00000484372 CACNA1FO60840 1977 aa15.19■□□□□ 0.02
SNRNP200-206ENST00000484372 FOXN1O15353 648 aa15.19■□□□□ 0.02
SNRNP200-206ENST00000484372 AGBL3Q8NEM8 1001 aa15.19■□□□□ 0.02
SNRNP200-206ENST00000484372 ANKRD2Q9GZV1 360 aa15.19■□□□□ 0.02
SNRNP200-206ENST00000484372 PRDM10Q9NQV6 1147 aa15.19■□□□□ 0.02
SNRNP200-206ENST00000484372 KCNQ5Q9NR82 932 aa15.19■□□□□ 0.02
SNRNP200-206ENST00000484372 MINPP1Q9UNW1 487 aa15.19■□□□□ 0.02
SNRNP200-206ENST00000484372 TRPM7Q96QT4 1865 aa15.18■□□□□ 0.02
SNRNP200-206ENST00000484372 SHTN1A0MZ66 631 aa15.18■□□□□ 0.02
SNRNP200-206ENST00000484372 ITGA6P23229 1130 aa15.18■□□□□ 0.02
SNRNP200-206ENST00000484372 CCT4P50991 539 aaKnown RBP15.18■□□□□ 0.02
SNRNP200-206ENST00000484372 KIF4BQ2VIQ3 1234 aa15.18■□□□□ 0.02
SNRNP200-206ENST00000484372 RSBN1LQ6PCB5 846 aaPredicted RBP15.18■□□□□ 0.02
SNRNP200-206ENST00000484372 KRT26Q7Z3Y9 468 aa15.18■□□□□ 0.02
SNRNP200-206ENST00000484372 USP48Q86UV5 1035 aa15.18■□□□□ 0.02
SNRNP200-206ENST00000484372 HHIPL1Q96JK4 782 aa15.18■□□□□ 0.02
SNRNP200-206ENST00000484372 LEMD3Q9Y2U8 911 aa15.18■□□□□ 0.02
SNRNP200-206ENST00000484372 COL4A1P02462 1669 aa15.17■□□□□ 0.02
SNRNP200-206ENST00000484372 MED23Q9ULK4 1368 aa15.17■□□□□ 0.02
SNRNP200-206ENST00000484372 ANKRD18BA2A2Z9 1011 aa15.17■□□□□ 0.02
SNRNP200-206ENST00000484372 USP17L3A6NCW0 530 aa15.17■□□□□ 0.02
SNRNP200-206ENST00000484372 USP17L4A6NCW7 530 aa15.17■□□□□ 0.02
SNRNP200-206ENST00000484372 MAP2K2P36507 400 aa15.17■□□□□ 0.02
SNRNP200-206ENST00000484372 KCNJ4P48050 445 aa15.17■□□□□ 0.02
SNRNP200-206ENST00000484372 CYP4F22Q6NT55 531 aa15.17■□□□□ 0.02
SNRNP200-206ENST00000484372 USP17L1Q7RTZ2 530 aa15.17■□□□□ 0.02
SNRNP200-206ENST00000484372 SAPCD2Q86UD0 394 aa15.17■□□□□ 0.02
SNRNP200-206ENST00000484372 SULF1Q8IWU6 871 aa15.17■□□□□ 0.02
SNRNP200-206ENST00000484372 MYH3P11055 1940 aa15.16■□□□□ 0.02
SNRNP200-206ENST00000484372 CSF1RP07333 972 aa15.16■□□□□ 0.02
SNRNP200-206ENST00000484372 USP17L8P0C7I0 530 aa15.16■□□□□ 0.02
SNRNP200-206ENST00000484372 C2orf69Q8N8R5 385 aa15.16■□□□□ 0.02
SNRNP200-206ENST00000484372 COA1Q9GZY4 146 aa15.16■□□□□ 0.02
SNRNP200-206ENST00000484372 CHMP3Q9Y3E7 222 aa15.16■□□□□ 0.02
SNRNP200-206ENST00000484372 IFIT5Q13325 482 aaKnown RBP15.15■□□□□ 0.02
SNRNP200-206ENST00000484372 FAM161AQ3B820 660 aa15.15■□□□□ 0.02
SNRNP200-206ENST00000484372 OGFOD1Q8N543 542 aa15.15■□□□□ 0.02
SNRNP200-206ENST00000484372 C9orf78Q9NZ63 289 aaPredicted RBP15.15■□□□□ 0.02
SNRNP200-206ENST00000484372 F6X3S4 739 aa15.14■□□□□ 0.01
SNRNP200-206ENST00000484372 CAPN15O75808 1086 aa15.14■□□□□ 0.01
SNRNP200-206ENST00000484372 MMP14P50281 582 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms