RNA–Protein interactions for RNA: ENST00000484101.5

UFD1-208, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-208ENST00000484101 ZBTB1Q9Y2K1 713 aa11.61□□□□□ -0.55
UFD1-208ENST00000484101 MED23Q9ULK4 1368 aa11.61□□□□□ -0.55
UFD1-208ENST00000484101 CCDC171Q6TFL3 1326 aa11.6□□□□□ -0.55
UFD1-208ENST00000484101 MYH7P12883 1935 aa11.6□□□□□ -0.55
UFD1-208ENST00000484101 RTL9Q8NET4 1388 aa11.6□□□□□ -0.55
UFD1-208ENST00000484101 ZKSCAN1P17029 563 aaPredicted RBP11.6□□□□□ -0.55
UFD1-208ENST00000484101 NEK4P51957 841 aa11.6□□□□□ -0.55
UFD1-208ENST00000484101 TAF7LQ5H9L4 462 aa11.6□□□□□ -0.55
UFD1-208ENST00000484101 CWC27Q6UX04 472 aaKnown RBP11.6□□□□□ -0.55
UFD1-208ENST00000484101 CLEC17AQ6ZS10 378 aa11.6□□□□□ -0.55
UFD1-208ENST00000484101 ATG9AQ7Z3C6 839 aa11.6□□□□□ -0.55
UFD1-208ENST00000484101 ZNF34Q8IZ26 560 aa11.6□□□□□ -0.55
UFD1-208ENST00000484101 JMYQ8N9B5 988 aa11.6□□□□□ -0.55
UFD1-208ENST00000484101 SLC4A9Q96Q91 983 aa11.6□□□□□ -0.55
UFD1-208ENST00000484101 ZNF330Q9Y3S2 320 aaPredicted RBP11.6□□□□□ -0.55
UFD1-208ENST00000484101 BTAF1O14981 1849 aa11.6□□□□□ -0.55
UFD1-208ENST00000484101 LY75O60449 1722 aa11.6□□□□□ -0.55
UFD1-208ENST00000484101 SH3TC1Q8TE82 1336 aa11.6□□□□□ -0.55
UFD1-208ENST00000484101 CNTNAP4Q9C0A0 1308 aa11.6□□□□□ -0.55
UFD1-208ENST00000484101 ANKRD18BA2A2Z9 1011 aa11.59□□□□□ -0.55
UFD1-208ENST00000484101 GOLGA6L22H0YM25 854 aa11.59□□□□□ -0.55
UFD1-208ENST00000484101 PDE8AO60658 829 aa11.59□□□□□ -0.55
UFD1-208ENST00000484101 PSMA5P28066 241 aa11.59□□□□□ -0.55
UFD1-208ENST00000484101 ATP6V1AP38606 617 aa11.59□□□□□ -0.55
UFD1-208ENST00000484101 CRKLP46109 303 aaKnown RBP11.59□□□□□ -0.55
UFD1-208ENST00000484101 CTSWP56202 376 aa11.59□□□□□ -0.55
UFD1-208ENST00000484101 KLHDC4Q8TBB5 520 aa11.59□□□□□ -0.55
UFD1-208ENST00000484101 DDX60Q8IY21 1712 aaKnown RBP11.59□□□□□ -0.55
UFD1-208ENST00000484101 MYH14Q7Z406 1995 aaKnown RBP11.59□□□□□ -0.55
UFD1-208ENST00000484101 FRAT2O75474 233 aaPredicted RBP11.58□□□□□ -0.56
UFD1-208ENST00000484101 CD2BP2O95400 341 aaKnown RBP11.58□□□□□ -0.56
UFD1-208ENST00000484101 MAP4K4O95819 1239 aaPredicted RBP11.58□□□□□ -0.56
UFD1-208ENST00000484101 PDIA4P13667 645 aaKnown RBP11.58□□□□□ -0.56
UFD1-208ENST00000484101 CUL4AQ13619 759 aa11.58□□□□□ -0.56
UFD1-208ENST00000484101 KRT32Q14532 448 aa11.58□□□□□ -0.56
UFD1-208ENST00000484101 CLEC4GQ6UXB4 293 aa11.58□□□□□ -0.56
UFD1-208ENST00000484101 KBTBD3Q8NAB2 608 aa11.58□□□□□ -0.56
UFD1-208ENST00000484101 BOLA2Q9H3K6 86 aa11.58□□□□□ -0.56
UFD1-208ENST00000484101 TLR7Q9NYK1 1049 aaKnown RBP11.58□□□□□ -0.56
UFD1-208ENST00000484101 COL24A1Q17RW2 1714 aa11.57□□□□□ -0.56
UFD1-208ENST00000484101 WDR90Q96KV7 1748 aa11.57□□□□□ -0.56
UFD1-208ENST00000484101 IRS4O14654 1257 aaPredicted RBP11.57□□□□□ -0.56
UFD1-208ENST00000484101 MCM4P33991 863 aa11.57□□□□□ -0.56
UFD1-208ENST00000484101 CCDC158Q5M9N0 1113 aa11.57□□□□□ -0.56
UFD1-208ENST00000484101 INTS5Q6P9B9 1019 aaKnown RBP11.57□□□□□ -0.56
UFD1-208ENST00000484101 KLRG1Q96E93 195 aa11.57□□□□□ -0.56
UFD1-208ENST00000484101 ZNF512BQ96KM6 892 aaPredicted RBP11.57□□□□□ -0.56
UFD1-208ENST00000484101 DBNDD2Q9BQY9 259 aa11.57□□□□□ -0.56
UFD1-208ENST00000484101 TRMT112Q9UI30 125 aaKnown RBP11.57□□□□□ -0.56
UFD1-208ENST00000484101 WWC3Q9ULE0 1092 aa11.57□□□□□ -0.56
UFD1-208ENST00000484101 RIC1Q4ADV7 1423 aa11.57□□□□□ -0.56
UFD1-208ENST00000484101 MROH5Q6ZUA9 1318 aa11.57□□□□□ -0.56
UFD1-208ENST00000484101 TAF1LQ8IZX4 1826 aa11.56□□□□□ -0.56
UFD1-208ENST00000484101 A0A1B0GUL7 405 aa11.56□□□□□ -0.56
UFD1-208ENST00000484101 ZFYP08048 801 aaPredicted RBP11.56□□□□□ -0.56
UFD1-208ENST00000484101 KCNJ4P48050 445 aa11.56□□□□□ -0.56
UFD1-208ENST00000484101 NMIQ13287 307 aaPredicted RBP11.56□□□□□ -0.56
UFD1-208ENST00000484101 ANKRD1Q15327 319 aa11.56□□□□□ -0.56
UFD1-208ENST00000484101 SKOR2Q2VWA4 1001 aaPredicted RBP11.56□□□□□ -0.56
UFD1-208ENST00000484101 TSGA10IPQ3SY00 556 aa11.56□□□□□ -0.56
UFD1-208ENST00000484101 RC3H1Q5TC82 1133 aaKnown RBP11.56□□□□□ -0.56
UFD1-208ENST00000484101 JARID2Q92833 1246 aaPredicted RBP11.56□□□□□ -0.56
UFD1-208ENST00000484101 MAP4K1Q92918 833 aa11.56□□□□□ -0.56
UFD1-208ENST00000484101 FAM89AQ96GI7 184 aa11.56□□□□□ -0.56
UFD1-208ENST00000484101 ZSCAN31Q96LW9 406 aaPredicted RBP11.56□□□□□ -0.56
UFD1-208ENST00000484101 UTP14AQ9BVJ6 771 aaKnown RBP11.56□□□□□ -0.56
UFD1-208ENST00000484101 SH2B1Q9NRF2 756 aaPredicted RBP11.56□□□□□ -0.56
UFD1-208ENST00000484101 HELLSQ9NRZ9 838 aa11.56□□□□□ -0.56
UFD1-208ENST00000484101 PAG1Q9NWQ8 432 aa11.56□□□□□ -0.56
UFD1-208ENST00000484101 SNX14Q9Y5W7 946 aa11.56□□□□□ -0.56
UFD1-208ENST00000484101 U3KPZ7 1027 aaPredicted RBP11.56□□□□□ -0.56
UFD1-208ENST00000484101 RPAP1Q9BWH6 1393 aaPredicted RBP11.55□□□□□ -0.56
UFD1-208ENST00000484101 CAMTA2O94983 1202 aa11.55□□□□□ -0.56
UFD1-208ENST00000484101 NECTIN1Q15223 517 aa11.55□□□□□ -0.56
UFD1-208ENST00000484101 HLFQ16534 295 aa11.55□□□□□ -0.56
UFD1-208ENST00000484101 MCMDC2Q4G0Z9 681 aa11.55□□□□□ -0.56
UFD1-208ENST00000484101 VPS53Q5VIR6 699 aa11.55□□□□□ -0.56
UFD1-208ENST00000484101 TTLL11Q8NHH1 800 aa11.55□□□□□ -0.56
UFD1-208ENST00000484101 TMX3Q96JJ7 454 aa11.55□□□□□ -0.56
UFD1-208ENST00000484101 NEUROD6Q96NK8 337 aa11.55□□□□□ -0.56
UFD1-208ENST00000484101 ALDH8A1Q9H2A2 487 aaPredicted RBP11.55□□□□□ -0.56
UFD1-208ENST00000484101 PALD1Q9ULE6 856 aa11.55□□□□□ -0.56
UFD1-208ENST00000484101 CYP46A1Q9Y6A2 500 aa11.55□□□□□ -0.56
UFD1-208ENST00000484101 IFIT1P09914 478 aaKnown RBP11.54□□□□□ -0.56
UFD1-208ENST00000484101 ITGA6P23229 1130 aa11.54□□□□□ -0.56
UFD1-208ENST00000484101 GSE1Q14687 1217 aa11.54□□□□□ -0.56
UFD1-208ENST00000484101 TTF1Q15361 905 aaPredicted RBP11.54□□□□□ -0.56
UFD1-208ENST00000484101 GORABQ5T7V8 394 aa11.54□□□□□ -0.56
UFD1-208ENST00000484101 USPL1Q5W0Q7 1092 aa11.54□□□□□ -0.56
UFD1-208ENST00000484101 SPRYD3Q8NCJ5 442 aa11.54□□□□□ -0.56
UFD1-208ENST00000484101 ACSBG1Q96GR2 724 aa11.54□□□□□ -0.56
UFD1-208ENST00000484101 DNAJC2Q99543 621 aaKnown RBP11.54□□□□□ -0.56
UFD1-208ENST00000484101 IL25Q9H293 177 aa11.54□□□□□ -0.56
UFD1-208ENST00000484101 RBM8AQ9Y5S9 174 aaKnown RBP11.54□□□□□ -0.56
UFD1-208ENST00000484101 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.54□□□□□ -0.56
UFD1-208ENST00000484101 UBN2Q6ZU65 1347 aa11.54□□□□□ -0.56
UFD1-208ENST00000484101 A0A0D9SFI3 127 aa11.53□□□□□ -0.56
UFD1-208ENST00000484101 CYP2E1P05181 493 aaPredicted RBP11.53□□□□□ -0.56
UFD1-208ENST00000484101 UQCRFS1P1P0C7P4 283 aa11.53□□□□□ -0.56
UFD1-208ENST00000484101 GPTP24298 496 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms