RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 BAG6P46379 1132 aa10.01□□□□□ -0.81
SNX13-208ENST00000482558 IDI1Q13907 227 aa10.01□□□□□ -0.81
SNX13-208ENST00000482558 CC2D2BQ6DHV5 1058 aa10.01□□□□□ -0.81
SNX13-208ENST00000482558 MRRFQ96E11 262 aaKnown RBP10.01□□□□□ -0.81
SNX13-208ENST00000482558 VRTNQ9H8Y1 702 aa10.01□□□□□ -0.81
SNX13-208ENST00000482558 RCAN3Q9UKA8 241 aa10.01□□□□□ -0.81
SNX13-208ENST00000482558 SIGLEC1Q9BZZ2 1709 aa10.01□□□□□ -0.81
SNX13-208ENST00000482558 CGNL1Q0VF96 1302 aa10.01□□□□□ -0.81
SNX13-208ENST00000482558 POLR3AO14802 1390 aaPredicted RBP10.01□□□□□ -0.81
SNX13-208ENST00000482558 KRBA1A5PL33 1030 aa10□□□□□ -0.81
SNX13-208ENST00000482558 GIGYF1O75420 1035 aaPredicted RBP10□□□□□ -0.81
SNX13-208ENST00000482558 NCLP19338 710 aaKnown RBP10□□□□□ -0.81
SNX13-208ENST00000482558 RNF20Q5VTR2 975 aa10□□□□□ -0.81
SNX13-208ENST00000482558 CYP2U1Q7Z449 544 aa10□□□□□ -0.81
SNX13-208ENST00000482558 SPATA32Q96LK8 384 aa10□□□□□ -0.81
SNX13-208ENST00000482558 TMEM131LA2VDJ0 1609 aa10□□□□□ -0.81
SNX13-208ENST00000482558 ERCC3P19447 782 aa9.99□□□□□ -0.81
SNX13-208ENST00000482558 RRP1P56182 461 aaKnown RBP9.99□□□□□ -0.81
SNX13-208ENST00000482558 SNRPNP63162 240 aaKnown RBP9.99□□□□□ -0.81
SNX13-208ENST00000482558 UCN2Q96RP3 112 aa9.99□□□□□ -0.81
SNX13-208ENST00000482558 TIMMDC1Q9NPL8 285 aa9.99□□□□□ -0.81
SNX13-208ENST00000482558 KIAA1522Q9P206 1035 aaPredicted RBP9.99□□□□□ -0.81
SNX13-208ENST00000482558 TRAK1Q9UPV9 953 aa9.99□□□□□ -0.81
SNX13-208ENST00000482558 PCDHB9Q9Y5E1 797 aa9.99□□□□□ -0.81
SNX13-208ENST00000482558 CFAP65Q6ZU64 1925 aaKnown RBP9.99□□□□□ -0.81
SNX13-208ENST00000482558 ATAD2Q6PL18 1390 aa9.99□□□□□ -0.81
SNX13-208ENST00000482558 ANKRD36BQ8N2N9 1353 aa9.99□□□□□ -0.81
SNX13-208ENST00000482558 RFX1P22670 979 aa9.98□□□□□ -0.81
SNX13-208ENST00000482558 TAS1R3Q7RTX0 852 aa9.98□□□□□ -0.81
SNX13-208ENST00000482558 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.98□□□□□ -0.81
SNX13-208ENST00000482558 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.98□□□□□ -0.81
SNX13-208ENST00000482558 CCDC136Q96JN2 1154 aa9.98□□□□□ -0.81
SNX13-208ENST00000482558 CFAP53Q96M91 514 aa9.98□□□□□ -0.81
SNX13-208ENST00000482558 PPP1R12CQ9BZL4 782 aa9.98□□□□□ -0.81
SNX13-208ENST00000482558 CWC22Q9HCG8 908 aaKnown RBP9.98□□□□□ -0.81
SNX13-208ENST00000482558 GDF2Q9UK05 429 aaPredicted RBP9.98□□□□□ -0.81
SNX13-208ENST00000482558 GNEQ9Y223 722 aaKnown RBP9.98□□□□□ -0.81
SNX13-208ENST00000482558 SPATA31D1Q6ZQQ2 1576 aa9.97□□□□□ -0.81
SNX13-208ENST00000482558 ARHGEF28Q8N1W1 1705 aaKnown RBP9.97□□□□□ -0.81
SNX13-208ENST00000482558 WASLO00401 505 aaPredicted RBP9.97□□□□□ -0.81
SNX13-208ENST00000482558 SMARCA5O60264 1052 aaPredicted RBP9.97□□□□□ -0.81
SNX13-208ENST00000482558 MCCD1P59942 119 aaPredicted RBP9.97□□□□□ -0.81
SNX13-208ENST00000482558 SREK1Q8WXA9 508 aaKnown RBP9.97□□□□□ -0.81
SNX13-208ENST00000482558 PHF24Q9UPV7 400 aa9.97□□□□□ -0.81
SNX13-208ENST00000482558 ARHGEF40Q8TER5 1519 aa9.97□□□□□ -0.81
SNX13-208ENST00000482558 CARNS1A5YM72 827 aa9.96□□□□□ -0.82
SNX13-208ENST00000482558 PALM3A6NDB9 673 aaPredicted RBP9.96□□□□□ -0.82
SNX13-208ENST00000482558 SRPK2P78362 688 aaKnown RBP9.96□□□□□ -0.82
SNX13-208ENST00000482558 IRX6P78412 446 aaPredicted RBP9.96□□□□□ -0.82
SNX13-208ENST00000482558 MORC1Q86VD1 984 aa9.96□□□□□ -0.82
SNX13-208ENST00000482558 C8orf37Q96NL8 207 aa9.96□□□□□ -0.82
SNX13-208ENST00000482558 KRTAP4-8Q9BYQ9 185 aa9.96□□□□□ -0.82
SNX13-208ENST00000482558 ESF1Q9H501 851 aaKnown RBP9.96□□□□□ -0.82
SNX13-208ENST00000482558 TERF2IPQ9NYB0 399 aa9.96□□□□□ -0.82
SNX13-208ENST00000482558 DLC1Q96QB1 1528 aa9.96□□□□□ -0.82
SNX13-208ENST00000482558 SHISA8B8ZZ34 492 aa9.95□□□□□ -0.82
SNX13-208ENST00000482558 LBRQ14739 615 aaKnown RBP9.95□□□□□ -0.82
SNX13-208ENST00000482558 B4GALNT3Q6L9W6 998 aa9.95□□□□□ -0.82
SNX13-208ENST00000482558 ANKRD13AQ8IZ07 590 aa9.95□□□□□ -0.82
SNX13-208ENST00000482558 Q8N3U1 123 aa9.95□□□□□ -0.82
SNX13-208ENST00000482558 RBM19Q9Y4C8 960 aaKnown RBP9.95□□□□□ -0.82
SNX13-208ENST00000482558 ZNF521Q96K83 1311 aa9.95□□□□□ -0.82
SNX13-208ENST00000482558 NSD3Q9BZ95 1437 aa9.95□□□□□ -0.82
SNX13-208ENST00000482558 MED14O60244 1454 aa9.94□□□□□ -0.82
SNX13-208ENST00000482558 YTHDC2Q9H6S0 1430 aaKnown RBP9.94□□□□□ -0.82
SNX13-208ENST00000482558 FANCIQ9NVI1 1328 aa9.94□□□□□ -0.82
SNX13-208ENST00000482558 TCF3P15923 654 aa9.94□□□□□ -0.82
SNX13-208ENST00000482558 COL8A1P27658 744 aa9.94□□□□□ -0.82
SNX13-208ENST00000482558 TMEM132EQ6IEE7 984 aa9.94□□□□□ -0.82
SNX13-208ENST00000482558 TXNDC2Q86VQ3 553 aa9.94□□□□□ -0.82
SNX13-208ENST00000482558 KLRG1Q96E93 195 aa9.94□□□□□ -0.82
SNX13-208ENST00000482558 SIRT1Q96EB6 747 aa9.94□□□□□ -0.82
SNX13-208ENST00000482558 CLTCQ00610 1675 aaKnown RBP9.93□□□□□ -0.82
SNX13-208ENST00000482558 PIK3R2O00459 728 aa9.93□□□□□ -0.82
SNX13-208ENST00000482558 GOLGA6L1Q8N7Z2 621 aa9.93□□□□□ -0.82
SNX13-208ENST00000482558 TFIP11Q9UBB9 837 aaKnown RBP9.93□□□□□ -0.82
SNX13-208ENST00000482558 TULP4Q9NRJ4 1543 aa9.92□□□□□ -0.82
SNX13-208ENST00000482558 ATP9BO43861 1147 aa9.92□□□□□ -0.82
SNX13-208ENST00000482558 THBS1P07996 1170 aa9.92□□□□□ -0.82
SNX13-208ENST00000482558 LMOD1P29536 600 aaPredicted RBP9.92□□□□□ -0.82
SNX13-208ENST00000482558 SLFNL1Q499Z3 407 aa9.92□□□□□ -0.82
SNX13-208ENST00000482558 TBC1D9Q6ZT07 1266 aa9.92□□□□□ -0.82
SNX13-208ENST00000482558 TRMT2AQ8IZ69 625 aaKnown RBP9.92□□□□□ -0.82
SNX13-208ENST00000482558 EDARADDQ8WWZ3 215 aa9.92□□□□□ -0.82
SNX13-208ENST00000482558 PNNQ9H307 717 aaKnown RBP9.92□□□□□ -0.82
SNX13-208ENST00000482558 POGKQ9P215 609 aa9.92□□□□□ -0.82
SNX13-208ENST00000482558 MAFBQ9Y5Q3 323 aaPredicted RBP9.92□□□□□ -0.82
SNX13-208ENST00000482558 ALKQ9UM73 1620 aa9.92□□□□□ -0.82
SNX13-208ENST00000482558 A2ML1A8K2U0 1454 aa9.91□□□□□ -0.82
SNX13-208ENST00000482558 PTPRMP28827 1452 aa9.91□□□□□ -0.82
SNX13-208ENST00000482558 TSPOAP1O95153 1857 aa9.91□□□□□ -0.82
SNX13-208ENST00000482558 ABCC11Q96J66 1382 aa9.91□□□□□ -0.82
SNX13-208ENST00000482558 A0A1B0GTH6 734 aa9.91□□□□□ -0.82
SNX13-208ENST00000482558 PIK3CDO00329 1044 aa9.91□□□□□ -0.82
SNX13-208ENST00000482558 SLFN5Q08AF3 891 aa9.91□□□□□ -0.82
SNX13-208ENST00000482558 AAMPQ13685 434 aa9.91□□□□□ -0.82
SNX13-208ENST00000482558 C1orf229Q6ZS94 237 aaPredicted RBP9.91□□□□□ -0.82
SNX13-208ENST00000482558 HDGFL2Q7Z4V5 671 aaPredicted RBP9.91□□□□□ -0.82
SNX13-208ENST00000482558 NFATC2IPQ8NCF5 419 aa9.91□□□□□ -0.82
SNX13-208ENST00000482558 RUNDC1Q96C34 613 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms