RNA–Protein interactions for RNA: ENST00000482320.5

TNPO3-204, Transcript of transportin 3, humanhuman

TSL 1 (best) BASIC

Gene TNPO3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-204ENST00000482320 PLBD2Q8NHP8 589 aa9.74□□□□□ -0.85
TNPO3-204ENST00000482320 HDAC5Q9UQL6 1122 aa9.74□□□□□ -0.85
TNPO3-204ENST00000482320 NIP7Q9Y221 180 aaKnown RBP eCLIP9.74□□□□□ -0.85
TNPO3-204ENST00000482320 ATRNO75882 1429 aa9.74□□□□□ -0.85
TNPO3-204ENST00000482320 DOCK2Q92608 1830 aa9.74□□□□□ -0.85
TNPO3-204ENST00000482320 MAP4K4O95819 1239 aaPredicted RBP9.74□□□□□ -0.85
TNPO3-204ENST00000482320 NBPF7P0C2Y1 421 aaPredicted RBP9.74□□□□□ -0.85
TNPO3-204ENST00000482320 TNNT3P45378 269 aaPredicted RBP9.74□□□□□ -0.85
TNPO3-204ENST00000482320 PDIA6Q15084 440 aa9.74□□□□□ -0.85
TNPO3-204ENST00000482320 GIMAP6Q6P9H5 292 aa9.74□□□□□ -0.85
TNPO3-204ENST00000482320 DEFB132Q7Z7B7 95 aa9.74□□□□□ -0.85
TNPO3-204ENST00000482320 RILPL2Q969X0 211 aa9.74□□□□□ -0.85
TNPO3-204ENST00000482320 ZBTB7BO15156 539 aaPredicted RBP9.73□□□□□ -0.85
TNPO3-204ENST00000482320 SRGAP3O43295 1099 aa9.73□□□□□ -0.85
TNPO3-204ENST00000482320 CCDC24Q8N4L8 307 aa9.73□□□□□ -0.85
TNPO3-204ENST00000482320 METTL22Q9BUU2 404 aaPredicted RBP9.73□□□□□ -0.85
TNPO3-204ENST00000482320 CWC25Q9NXE8 425 aaPredicted RBP9.73□□□□□ -0.85
TNPO3-204ENST00000482320 ZNF652Q9Y2D9 606 aa9.73□□□□□ -0.85
TNPO3-204ENST00000482320 BAG6P46379 1132 aa9.73□□□□□ -0.85
TNPO3-204ENST00000482320 INTS3Q68E01 1043 aaKnown RBP9.73□□□□□ -0.85
TNPO3-204ENST00000482320 LINC00116Q8NCU8 138 aa9.73□□□□□ -0.85
TNPO3-204ENST00000482320 FAM89AQ96GI7 184 aa9.73□□□□□ -0.85
TNPO3-204ENST00000482320 SIL1Q9H173 461 aa9.73□□□□□ -0.85
TNPO3-204ENST00000482320 TRIM6-TRIM34B2RNG4 842 aa9.73□□□□□ -0.85
TNPO3-204ENST00000482320 SURF6O75683 361 aaKnown RBP9.73□□□□□ -0.85
TNPO3-204ENST00000482320 GTF2F1P35269 517 aaKnown RBP eCLIP9.73□□□□□ -0.85
TNPO3-204ENST00000482320 TRIM34Q9BYJ4 488 aa9.73□□□□□ -0.85
TNPO3-204ENST00000482320 ZBTB40Q9NUA8 1239 aa9.73□□□□□ -0.85
TNPO3-204ENST00000482320 COL24A1Q17RW2 1714 aa9.72□□□□□ -0.85
TNPO3-204ENST00000482320 CCDC66A2RUB6 948 aa9.72□□□□□ -0.85
TNPO3-204ENST00000482320 GRM8O00222 908 aa9.72□□□□□ -0.85
TNPO3-204ENST00000482320 IL6STP40189 918 aaPredicted RBP9.72□□□□□ -0.85
TNPO3-204ENST00000482320 GORABQ5T7V8 394 aa9.72□□□□□ -0.85
TNPO3-204ENST00000482320 PYCARDQ9ULZ3 195 aa9.72□□□□□ -0.85
TNPO3-204ENST00000482320 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.72□□□□□ -0.85
TNPO3-204ENST00000482320 HLFQ16534 295 aa9.72□□□□□ -0.85
TNPO3-204ENST00000482320 SRP68Q9UHB9 627 aaKnown RBP9.72□□□□□ -0.85
TNPO3-204ENST00000482320 FOSBP53539 338 aa9.71□□□□□ -0.85
TNPO3-204ENST00000482320 HSP90AB3PQ58FF7 597 aa9.71□□□□□ -0.85
TNPO3-204ENST00000482320 BEND3Q5T5X7 828 aa9.71□□□□□ -0.85
TNPO3-204ENST00000482320 USP44Q9H0E7 712 aa9.71□□□□□ -0.85
TNPO3-204ENST00000482320 EXOC6BQ9Y2D4 811 aa9.71□□□□□ -0.85
TNPO3-204ENST00000482320 ABCC4O15439 1325 aa9.71□□□□□ -0.85
TNPO3-204ENST00000482320 LRMPQ12912 555 aa9.71□□□□□ -0.85
TNPO3-204ENST00000482320 USPL1Q5W0Q7 1092 aa9.71□□□□□ -0.85
TNPO3-204ENST00000482320 ANO2Q9NQ90 1003 aa9.71□□□□□ -0.85
TNPO3-204ENST00000482320 CYP2E1P05181 493 aaPredicted RBP9.71□□□□□ -0.86
TNPO3-204ENST00000482320 CASC1Q6TDU7 716 aa9.71□□□□□ -0.86
TNPO3-204ENST00000482320 SETDB2Q96T68 719 aa9.71□□□□□ -0.86
TNPO3-204ENST00000482320 FEZ1Q99689 392 aa9.71□□□□□ -0.86
TNPO3-204ENST00000482320 TRMT1Q9NXH9 659 aaKnown RBP9.71□□□□□ -0.86
TNPO3-204ENST00000482320 OGFRQ9NZT2 677 aa9.71□□□□□ -0.86
TNPO3-204ENST00000482320 PPP1R1BQ9UD71 204 aaPredicted RBP9.71□□□□□ -0.86
TNPO3-204ENST00000482320 PPFIA3O75145 1194 aa9.7□□□□□ -0.86
TNPO3-204ENST00000482320 ALDH1L1O75891 902 aa9.7□□□□□ -0.86
TNPO3-204ENST00000482320 TCIRG1Q13488 830 aa9.7□□□□□ -0.86
TNPO3-204ENST00000482320 NEURL1BA8MQ27 555 aa9.7□□□□□ -0.86
TNPO3-204ENST00000482320 POLR3GO15318 223 aaPredicted RBP9.7□□□□□ -0.86
TNPO3-204ENST00000482320 GCKRQ14397 625 aa9.7□□□□□ -0.86
TNPO3-204ENST00000482320 PPP1R42Q7Z4L9 355 aa9.7□□□□□ -0.86
TNPO3-204ENST00000482320 NUTM1Q86Y26 1132 aa9.7□□□□□ -0.86
TNPO3-204ENST00000482320 GCC1Q96CN9 775 aa9.7□□□□□ -0.86
TNPO3-204ENST00000482320 BCORQ6W2J9 1755 aa9.7□□□□□ -0.86
TNPO3-204ENST00000482320 MAP3K15Q6ZN16 1313 aa9.7□□□□□ -0.86
TNPO3-204ENST00000482320 EZH2Q15910 746 aaKnown RBP9.7□□□□□ -0.86
TNPO3-204ENST00000482320 INTS5Q6P9B9 1019 aaKnown RBP9.7□□□□□ -0.86
TNPO3-204ENST00000482320 NBPF5PQ86XG9 351 aaPredicted RBP9.7□□□□□ -0.86
TNPO3-204ENST00000482320 MSL1Q68DK7 614 aa9.69□□□□□ -0.86
TNPO3-204ENST00000482320 GIGYF2Q6Y7W6 1299 aaKnown RBP9.69□□□□□ -0.86
TNPO3-204ENST00000482320 FERMT3Q86UX7 667 aa9.69□□□□□ -0.86
TNPO3-204ENST00000482320 CKAP2LQ8IYA6 745 aa9.69□□□□□ -0.86
TNPO3-204ENST00000482320 FAM184AQ8NB25 1140 aa9.69□□□□□ -0.86
TNPO3-204ENST00000482320 LRRC4BQ9NT99 713 aa9.69□□□□□ -0.86
TNPO3-204ENST00000482320 PTGS1P23219 599 aa9.69□□□□□ -0.86
TNPO3-204ENST00000482320 G3BP1Q13283 466 aaKnown RBP eCLIP9.69□□□□□ -0.86
TNPO3-204ENST00000482320 RPAP2Q8IXW5 612 aaPredicted RBP9.69□□□□□ -0.86
TNPO3-204ENST00000482320 ARHGEF1Q92888 912 aaKnown RBP9.69□□□□□ -0.86
TNPO3-204ENST00000482320 GTF3C6Q969F1 213 aa9.69□□□□□ -0.86
TNPO3-204ENST00000482320 CNPY2Q9Y2B0 182 aa9.69□□□□□ -0.86
TNPO3-204ENST00000482320 ZDHHC9Q9Y397 364 aa9.69□□□□□ -0.86
TNPO3-204ENST00000482320 EP400Q96L91 3159 aa9.69□□□□□ -0.86
TNPO3-204ENST00000482320 RPS6KA4O75676 772 aa9.69□□□□□ -0.86
TNPO3-204ENST00000482320 IGKV5-2P06315 115 aa9.69□□□□□ -0.86
TNPO3-204ENST00000482320 EIF5P55010 431 aaKnown RBP9.69□□□□□ -0.86
TNPO3-204ENST00000482320 IRX5P78411 483 aaPredicted RBP9.69□□□□□ -0.86
TNPO3-204ENST00000482320 LMBR1LQ6UX01 489 aa9.69□□□□□ -0.86
TNPO3-204ENST00000482320 TIGD1Q96MW7 591 aa9.69□□□□□ -0.86
TNPO3-204ENST00000482320 STK32BQ9NY57 414 aa9.69□□□□□ -0.86
TNPO3-204ENST00000482320 ADCY9O60503 1353 aa9.68□□□□□ -0.86
TNPO3-204ENST00000482320 CCDC57Q2TAC2 916 aa9.68□□□□□ -0.86
TNPO3-204ENST00000482320 SYNE4Q8N205 404 aa9.68□□□□□ -0.86
TNPO3-204ENST00000482320 IL1RAPL2Q9NP60 686 aa9.68□□□□□ -0.86
TNPO3-204ENST00000482320 A0A087WWV3 80 aa9.68□□□□□ -0.86
TNPO3-204ENST00000482320 VPS37CA5D8V6 355 aaPredicted RBP9.68□□□□□ -0.86
TNPO3-204ENST00000482320 CPA1P15085 419 aa9.68□□□□□ -0.86
TNPO3-204ENST00000482320 KCNA4P22459 653 aa9.68□□□□□ -0.86
TNPO3-204ENST00000482320 GABPB1Q06547 395 aaPredicted RBP9.68□□□□□ -0.86
TNPO3-204ENST00000482320 USP48Q86UV5 1035 aa9.68□□□□□ -0.86
TNPO3-204ENST00000482320 BICC1Q9H694 974 aaKnown RBP9.68□□□□□ -0.86
TNPO3-204ENST00000482320 RGS12O14924 1447 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms