RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 HAUS7Q99871 368 aa17.38■□□□□ 0.37
CHD3-211ENST00000481999 LDHAL6AQ6ZMR3 332 aa17.37■□□□□ 0.37
CHD3-211ENST00000481999 AMIGO3Q86WK7 504 aa17.37■□□□□ 0.37
CHD3-211ENST00000481999 CEP126Q9P2H0 1117 aa17.37■□□□□ 0.37
CHD3-211ENST00000481999 CYP2E1P05181 493 aaPredicted RBP17.37■□□□□ 0.37
CHD3-211ENST00000481999 KCNJ4P48050 445 aa17.37■□□□□ 0.37
CHD3-211ENST00000481999 SEC31BQ9NQW1 1179 aa17.37■□□□□ 0.37
CHD3-211ENST00000481999 ANKRD36CQ5JPF3 1778 aa17.36■□□□□ 0.37
CHD3-211ENST00000481999 FKBP4Q02790 459 aaKnown RBP eCLIP17.36■□□□□ 0.37
CHD3-211ENST00000481999 NECTIN1Q15223 517 aa17.36■□□□□ 0.37
CHD3-211ENST00000481999 KLHL40Q2TBA0 621 aa17.36■□□□□ 0.37
CHD3-211ENST00000481999 HSP90AB3PQ58FF7 597 aa17.36■□□□□ 0.37
CHD3-211ENST00000481999 JAKMIP1Q96N16 626 aaKnown RBP17.36■□□□□ 0.37
CHD3-211ENST00000481999 PLA2G12BQ9BX93 195 aa17.36■□□□□ 0.37
CHD3-211ENST00000481999 ERVV-1B6SEH8 477 aa17.36■□□□□ 0.37
CHD3-211ENST00000481999 BICDL1Q6ZP65 573 aa17.36■□□□□ 0.37
CHD3-211ENST00000481999 XAGE2Q96GT9 111 aa17.36■□□□□ 0.37
CHD3-211ENST00000481999 NIP7Q9Y221 180 aaKnown RBP eCLIP17.36■□□□□ 0.37
CHD3-211ENST00000481999 RIC1Q4ADV7 1423 aa17.35■□□□□ 0.37
CHD3-211ENST00000481999 MED23Q9ULK4 1368 aa17.35■□□□□ 0.37
CHD3-211ENST00000481999 LARGE1O95461 756 aa17.35■□□□□ 0.37
CHD3-211ENST00000481999 AK2P54819 239 aa17.35■□□□□ 0.37
CHD3-211ENST00000481999 RBM6P78332 1123 aaKnown RBP17.35■□□□□ 0.37
CHD3-211ENST00000481999 PAG1Q9NWQ8 432 aa17.35■□□□□ 0.37
CHD3-211ENST00000481999 A0A0G2JLW4 131 aa17.35■□□□□ 0.37
CHD3-211ENST00000481999 CIAO1O76071 339 aa17.35■□□□□ 0.37
CHD3-211ENST00000481999 VPS53Q5VIR6 699 aa17.35■□□□□ 0.37
CHD3-211ENST00000481999 CREB3L3Q68CJ9 461 aa17.35■□□□□ 0.37
CHD3-211ENST00000481999 MAP4K1Q92918 833 aa17.35■□□□□ 0.37
CHD3-211ENST00000481999 RRAGDQ9NQL2 400 aaPredicted RBP17.35■□□□□ 0.37
CHD3-211ENST00000481999 RIPOR2Q9Y4F9 1068 aa17.35■□□□□ 0.37
CHD3-211ENST00000481999 CDHR2Q9BYE9 1310 aa17.34■□□□□ 0.37
CHD3-211ENST00000481999 IFIT1P09914 478 aaKnown RBP17.34■□□□□ 0.37
CHD3-211ENST00000481999 RXRBP28702 533 aa17.34■□□□□ 0.37
CHD3-211ENST00000481999 METTL24Q5JXM2 366 aa17.34■□□□□ 0.37
CHD3-211ENST00000481999 CNNM1Q9NRU3 951 aa17.34■□□□□ 0.37
CHD3-211ENST00000481999 ZDHHC9Q9Y397 364 aa17.34■□□□□ 0.37
CHD3-211ENST00000481999 RUFY3Q7L099 469 aa17.34■□□□□ 0.37
CHD3-211ENST00000481999 CCDC24Q8N4L8 307 aa17.34■□□□□ 0.37
CHD3-211ENST00000481999 TTC14Q96N46 770 aa17.34■□□□□ 0.37
CHD3-211ENST00000481999 DDX49Q9Y6V7 483 aaKnown RBP17.34■□□□□ 0.37
CHD3-211ENST00000481999 COL4A1P02462 1669 aa17.33■□□□□ 0.36
CHD3-211ENST00000481999 TAF5LO75529 589 aa17.33■□□□□ 0.36
CHD3-211ENST00000481999 MCM2P49736 904 aa17.33■□□□□ 0.36
CHD3-211ENST00000481999 GAS2L3Q86XJ1 694 aa17.33■□□□□ 0.36
CHD3-211ENST00000481999 ANO8Q9HCE9 1232 aaPredicted RBP17.33■□□□□ 0.36
CHD3-211ENST00000481999 MYH3P11055 1940 aa17.33■□□□□ 0.36
CHD3-211ENST00000481999 SLC27A2O14975 620 aa17.32■□□□□ 0.36
CHD3-211ENST00000481999 PDE8AO60658 829 aa17.32■□□□□ 0.36
CHD3-211ENST00000481999 GORABQ5T7V8 394 aa17.32■□□□□ 0.36
CHD3-211ENST00000481999 KBTBD3Q8NAB2 608 aa17.32■□□□□ 0.36
CHD3-211ENST00000481999 ANKRD18BA2A2Z9 1011 aa17.32■□□□□ 0.36
CHD3-211ENST00000481999 FOXD4L6Q3SYB3 417 aaPredicted RBP17.32■□□□□ 0.36
CHD3-211ENST00000481999 FOXD4L3Q6VB84 417 aaPredicted RBP17.32■□□□□ 0.36
CHD3-211ENST00000481999 IL17RAQ96F46 866 aa17.32■□□□□ 0.36
CHD3-211ENST00000481999 C3orf67Q6ZVT6 689 aa17.31■□□□□ 0.36
CHD3-211ENST00000481999 WTIPA6NIX2 430 aaPredicted RBP17.31■□□□□ 0.36
CHD3-211ENST00000481999 GPR108Q9NPR9 543 aa17.31■□□□□ 0.36
CHD3-211ENST00000481999 SRP68Q9UHB9 627 aaKnown RBP17.31■□□□□ 0.36
CHD3-211ENST00000481999 SH3TC1Q8TE82 1336 aa17.31■□□□□ 0.36
CHD3-211ENST00000481999 HIP1O00291 1037 aa17.3■□□□□ 0.36
CHD3-211ENST00000481999 ZAP70P43403 619 aa17.3■□□□□ 0.36
CHD3-211ENST00000481999 ATP2B3Q16720 1220 aa17.3■□□□□ 0.36
CHD3-211ENST00000481999 MCTP1Q6DN14 999 aa17.3■□□□□ 0.36
CHD3-211ENST00000481999 TTC39AQ5SRH9 613 aa17.3■□□□□ 0.36
CHD3-211ENST00000481999 VGLL2Q8N8G2 317 aa17.3■□□□□ 0.36
CHD3-211ENST00000481999 UTP14AQ9BVJ6 771 aaKnown RBP17.3■□□□□ 0.36
CHD3-211ENST00000481999 TAF1P21675 1872 aa17.3■□□□□ 0.36
CHD3-211ENST00000481999 NTSR2O95665 410 aa17.29■□□□□ 0.36
CHD3-211ENST00000481999 EPB41L2O43491 1005 aaKnown RBP17.29■□□□□ 0.36
CHD3-211ENST00000481999 MCAMP43121 646 aa17.29■□□□□ 0.36
CHD3-211ENST00000481999 SMARCC1Q92922 1105 aaPredicted RBP17.29■□□□□ 0.36
CHD3-211ENST00000481999 ONECUT3O60422 494 aaPredicted RBP17.28■□□□□ 0.36
CHD3-211ENST00000481999 CUL4AQ13619 759 aa17.28■□□□□ 0.36
CHD3-211ENST00000481999 SEPT12Q8IYM1 358 aa17.28■□□□□ 0.36
CHD3-211ENST00000481999 COL5A3P25940 1745 aaPredicted RBP17.28■□□□□ 0.36
CHD3-211ENST00000481999 MCMDC2Q4G0Z9 681 aa17.28■□□□□ 0.36
CHD3-211ENST00000481999 LMBRD1Q9NUN5 540 aa17.28■□□□□ 0.36
CHD3-211ENST00000481999 M0R2C6 588 aa17.27■□□□□ 0.36
CHD3-211ENST00000481999 ZKSCAN1P17029 563 aaPredicted RBP17.27■□□□□ 0.36
CHD3-211ENST00000481999 PHKA1P46020 1223 aa17.27■□□□□ 0.36
CHD3-211ENST00000481999 CCDC158Q5M9N0 1113 aa17.27■□□□□ 0.36
CHD3-211ENST00000481999 NECAB1Q8N987 351 aa17.27■□□□□ 0.36
CHD3-211ENST00000481999 OSBP2Q969R2 916 aa17.27■□□□□ 0.36
CHD3-211ENST00000481999 PDRG1Q9NUG6 133 aa17.27■□□□□ 0.36
CHD3-211ENST00000481999 THSD7AQ9UPZ6 1657 aa17.27■□□□□ 0.36
CHD3-211ENST00000481999 BTAF1O14981 1849 aa17.27■□□□□ 0.36
CHD3-211ENST00000481999 GNPATO15228 680 aa17.27■□□□□ 0.36
CHD3-211ENST00000481999 CYP21A2P08686 494 aa17.27■□□□□ 0.36
CHD3-211ENST00000481999 CLCN1P35523 988 aa17.27■□□□□ 0.36
CHD3-211ENST00000481999 ST3GAL1Q11201 340 aa17.27■□□□□ 0.36
CHD3-211ENST00000481999 ERFEQ4G0M1 354 aa17.27■□□□□ 0.36
CHD3-211ENST00000481999 USPL1Q5W0Q7 1092 aa17.27■□□□□ 0.36
CHD3-211ENST00000481999 TBC1D9BQ66K14 1250 aa17.27■□□□□ 0.36
CHD3-211ENST00000481999 BCL2L12Q9HB09 334 aa17.27■□□□□ 0.36
CHD3-211ENST00000481999 ZSWIM6Q9HCJ5 1215 aa17.27■□□□□ 0.36
CHD3-211ENST00000481999 PHF14O94880 888 aa17.26■□□□□ 0.35
CHD3-211ENST00000481999 PDE8BO95263 885 aa17.26■□□□□ 0.35
CHD3-211ENST00000481999 SLC51AQ86UW1 340 aa17.26■□□□□ 0.35
CHD3-211ENST00000481999 KCNB2Q92953 911 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms