RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 PLEKHG6Q3KR16 790 aa4.63□□□□□ -1.67
SMC6-208ENST00000481708 BCCIPQ9P287 314 aaKnown RBP eCLIP4.63□□□□□ -1.67
SMC6-208ENST00000481708 GPR182O15218 404 aa4.62□□□□□ -1.67
SMC6-208ENST00000481708 PPFIA4O75335 1185 aa4.62□□□□□ -1.67
SMC6-208ENST00000481708 ZNF516Q92618 1163 aa4.62□□□□□ -1.67
SMC6-208ENST00000481708 PRR12Q9ULL5 1215 aa4.62□□□□□ -1.67
SMC6-208ENST00000481708 C4AP0C0L4 1744 aa4.62□□□□□ -1.67
SMC6-208ENST00000481708 C4BP0C0L5 1744 aa4.62□□□□□ -1.67
SMC6-208ENST00000481708 ZPR1O75312 459 aa4.62□□□□□ -1.67
SMC6-208ENST00000481708 AMPD3Q01432 767 aa4.62□□□□□ -1.67
SMC6-208ENST00000481708 MTRQ99707 1265 aa4.62□□□□□ -1.67
SMC6-208ENST00000481708 IRF2BPLQ9H1B7 796 aa4.62□□□□□ -1.67
SMC6-208ENST00000481708 LTN1O94822 1766 aa4.62□□□□□ -1.67
SMC6-208ENST00000481708 SFI1A8K8P3 1242 aa4.62□□□□□ -1.67
SMC6-208ENST00000481708 PLPP7Q8NBV4 271 aa4.62□□□□□ -1.67
SMC6-208ENST00000481708 SLC39A13Q96H72 371 aa4.62□□□□□ -1.67
SMC6-208ENST00000481708 DUSP9Q99956 384 aaKnown RBP4.62□□□□□ -1.67
SMC6-208ENST00000481708 PCDH12Q9NPG4 1184 aa4.62□□□□□ -1.67
SMC6-208ENST00000481708 CEP126Q9P2H0 1117 aa4.62□□□□□ -1.67
SMC6-208ENST00000481708 THRAP3Q9Y2W1 955 aaKnown RBP4.62□□□□□ -1.67
SMC6-208ENST00000481708 NFAT5O94916 1531 aa4.61□□□□□ -1.67
SMC6-208ENST00000481708 SPATA31A6Q5VVP1 1343 aa4.61□□□□□ -1.67
SMC6-208ENST00000481708 U2SURPO15042 1029 aaKnown RBP4.61□□□□□ -1.67
SMC6-208ENST00000481708 APBB1IPQ7Z5R6 666 aaPredicted RBP4.61□□□□□ -1.67
SMC6-208ENST00000481708 ANKARQ7Z5J8 1434 aa4.61□□□□□ -1.67
SMC6-208ENST00000481708 MAP3K5Q99683 1374 aa4.61□□□□□ -1.67
SMC6-208ENST00000481708 TJAP1Q5JTD0 557 aa4.61□□□□□ -1.67
SMC6-208ENST00000481708 SIX5Q8N196 739 aa4.61□□□□□ -1.67
SMC6-208ENST00000481708 FAM126AQ9BYI3 521 aaPredicted RBP4.61□□□□□ -1.67
SMC6-208ENST00000481708 IFT57Q9NWB7 429 aa4.61□□□□□ -1.67
SMC6-208ENST00000481708 LZTS3O60299 673 aaPredicted RBP4.61□□□□□ -1.67
SMC6-208ENST00000481708 ATP2B1P20020 1258 aa4.61□□□□□ -1.67
SMC6-208ENST00000481708 PNMA1Q8ND90 353 aa4.61□□□□□ -1.67
SMC6-208ENST00000481708 SRA1Q9HD15 236 aaKnown RBP4.61□□□□□ -1.67
SMC6-208ENST00000481708 SSH2Q76I76 1423 aa4.6□□□□□ -1.67
SMC6-208ENST00000481708 hCG_2014768A0A024R1R8 64 aa4.6□□□□□ -1.67
SMC6-208ENST00000481708 DAB2P98082 770 aa4.6□□□□□ -1.67
SMC6-208ENST00000481708 G3BP2Q9UN86 482 aaKnown RBP4.6□□□□□ -1.67
SMC6-208ENST00000481708 NOP58Q9Y2X3 529 aaKnown RBP4.6□□□□□ -1.67
SMC6-208ENST00000481708 COL4A3BPQ9Y5P4 624 aa4.6□□□□□ -1.67
SMC6-208ENST00000481708 ADH1BP00325 375 aa4.6□□□□□ -1.67
SMC6-208ENST00000481708 PDE6BP35913 854 aa4.6□□□□□ -1.67
SMC6-208ENST00000481708 SERINC3Q13530 473 aa4.6□□□□□ -1.67
SMC6-208ENST00000481708 NAA30Q147X3 362 aaPredicted RBP4.6□□□□□ -1.67
SMC6-208ENST00000481708 COL19A1Q14993 1142 aa4.6□□□□□ -1.67
SMC6-208ENST00000481708 PDXDC2PQ6P474 469 aa4.6□□□□□ -1.67
SMC6-208ENST00000481708 TMC4Q7Z404 712 aa4.6□□□□□ -1.67
SMC6-208ENST00000481708 UNC93B1Q9H1C4 597 aa4.6□□□□□ -1.67
SMC6-208ENST00000481708 OSBPL2Q9H1P3 480 aa4.6□□□□□ -1.67
SMC6-208ENST00000481708 UBR3Q6ZT12 1888 aa4.6□□□□□ -1.67
SMC6-208ENST00000481708 NKX2-3Q8TAU0 364 aa4.6□□□□□ -1.67
SMC6-208ENST00000481708 CCDC87Q9NVE4 849 aa4.6□□□□□ -1.67
SMC6-208ENST00000481708 COL5A2P05997 1499 aaPredicted RBP4.6□□□□□ -1.67
SMC6-208ENST00000481708 DICER1Q9UPY3 1922 aaKnown RBP4.6□□□□□ -1.67
SMC6-208ENST00000481708 TNRC6CQ9HCJ0 1690 aaKnown RBP4.59□□□□□ -1.67
SMC6-208ENST00000481708 CLSTN1O94985 981 aa4.59□□□□□ -1.67
SMC6-208ENST00000481708 SH3BP5LQ7L8J4 393 aa4.59□□□□□ -1.67
SMC6-208ENST00000481708 ADAM32Q8TC27 787 aa4.59□□□□□ -1.67
SMC6-208ENST00000481708 CCDC85AQ96PX6 553 aaPredicted RBP4.59□□□□□ -1.67
SMC6-208ENST00000481708 BCORQ6W2J9 1755 aa4.59□□□□□ -1.67
SMC6-208ENST00000481708 SAP130Q9H0E3 1048 aa4.59□□□□□ -1.67
SMC6-208ENST00000481708 MYH16Q9H6N6 1097 aa4.59□□□□□ -1.67
SMC6-208ENST00000481708 DDX41Q9UJV9 622 aaKnown RBP4.59□□□□□ -1.67
SMC6-208ENST00000481708 KIF20BQ96Q89 1820 aa4.59□□□□□ -1.67
SMC6-208ENST00000481708 PTPN5P54829 565 aa4.59□□□□□ -1.68
SMC6-208ENST00000481708 C4orf48Q5BLP8 95 aa4.59□□□□□ -1.68
SMC6-208ENST00000481708 SH3RF1Q7Z6J0 888 aa4.59□□□□□ -1.68
SMC6-208ENST00000481708 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.59□□□□□ -1.68
SMC6-208ENST00000481708 GPSM3Q9Y4H4 160 aa4.59□□□□□ -1.68
SMC6-208ENST00000481708 NPR3P17342 541 aa4.58□□□□□ -1.68
SMC6-208ENST00000481708 WEE1P30291 646 aa4.58□□□□□ -1.68
SMC6-208ENST00000481708 FOXD4L6Q3SYB3 417 aaPredicted RBP4.58□□□□□ -1.68
SMC6-208ENST00000481708 FOXD4L3Q6VB84 417 aaPredicted RBP4.58□□□□□ -1.68
SMC6-208ENST00000481708 ARMC5Q96C12 935 aa4.58□□□□□ -1.68
SMC6-208ENST00000481708 RNPC3Q96LT9 517 aaKnown RBP4.58□□□□□ -1.68
SMC6-208ENST00000481708 TMEM94Q12767 1356 aa4.58□□□□□ -1.68
SMC6-208ENST00000481708 PNPLA6Q8IY17 1366 aa4.58□□□□□ -1.68
SMC6-208ENST00000481708 ATP5J2-PTCD1G3V325 749 aa4.58□□□□□ -1.68
SMC6-208ENST00000481708 EVA1CP58658 441 aa4.58□□□□□ -1.68
SMC6-208ENST00000481708 RBCK1Q9BYM8 510 aa4.58□□□□□ -1.68
SMC6-208ENST00000481708 PRDM10Q9NQV6 1147 aa4.58□□□□□ -1.68
SMC6-208ENST00000481708 TTF2Q9UNY4 1162 aaKnown RBP4.58□□□□□ -1.68
SMC6-208ENST00000481708 TNFRSF10BO14763 440 aa4.58□□□□□ -1.68
SMC6-208ENST00000481708 FZD6O60353 706 aa4.58□□□□□ -1.68
SMC6-208ENST00000481708 TBX4P57082 545 aa4.58□□□□□ -1.68
SMC6-208ENST00000481708 IGBP1P78318 339 aa4.58□□□□□ -1.68
SMC6-208ENST00000481708 PTK2Q05397 1052 aa4.58□□□□□ -1.68
SMC6-208ENST00000481708 CCDC24Q8N4L8 307 aa4.58□□□□□ -1.68
SMC6-208ENST00000481708 FKBP4Q02790 459 aaKnown RBP eCLIP4.57□□□□□ -1.68
SMC6-208ENST00000481708 LARP1Q6PKG0 1096 aaKnown RBP4.57□□□□□ -1.68
SMC6-208ENST00000481708 TSEN2Q8NCE0 465 aaKnown RBP4.57□□□□□ -1.68
SMC6-208ENST00000481708 NLRP2Q9NX02 1062 aa4.57□□□□□ -1.68
SMC6-208ENST00000481708 PCDHB9Q9Y5E1 797 aa4.57□□□□□ -1.68
SMC6-208ENST00000481708 S1PR4O95977 384 aa4.57□□□□□ -1.68
SMC6-208ENST00000481708 EHHADHQ08426 723 aa4.57□□□□□ -1.68
SMC6-208ENST00000481708 NBPF14Q5TI25 921 aa4.57□□□□□ -1.68
SMC6-208ENST00000481708 NYAP1Q6ZVC0 841 aa4.57□□□□□ -1.68
SMC6-208ENST00000481708 GPKOWQ92917 476 aaPredicted RBP eCLIP4.57□□□□□ -1.68
SMC6-208ENST00000481708 RNF34Q969K3 372 aa4.57□□□□□ -1.68
SMC6-208ENST00000481708 CHST12Q9NRB3 414 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms