RNA–Protein interactions for RNA: ENST00000481098.1

GTF3C3-211, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-211ENST00000481098 NSUN5Q96P11 429 aaKnown RBP10.53□□□□□ -0.72
GTF3C3-211ENST00000481098 LPIN3Q9BQK8 851 aa10.53□□□□□ -0.72
GTF3C3-211ENST00000481098 CHRDQ9H2X0 955 aa10.53□□□□□ -0.72
GTF3C3-211ENST00000481098 CNTN3Q9P232 1028 aa10.53□□□□□ -0.72
GTF3C3-211ENST00000481098 BIN2Q9UBW5 565 aaPredicted RBP10.53□□□□□ -0.72
GTF3C3-211ENST00000481098 DCTN4Q9UJW0 460 aa10.53□□□□□ -0.72
GTF3C3-211ENST00000481098 CNTNAP5Q8WYK1 1306 aa10.53□□□□□ -0.72
GTF3C3-211ENST00000481098 PHF20L1A8MW92 1017 aa10.52□□□□□ -0.73
GTF3C3-211ENST00000481098 GNB5O14775 395 aa10.52□□□□□ -0.73
GTF3C3-211ENST00000481098 MLLT1Q03111 559 aaPredicted RBP10.52□□□□□ -0.73
GTF3C3-211ENST00000481098 HYAL2Q12891 473 aa10.52□□□□□ -0.73
GTF3C3-211ENST00000481098 PSAPL1Q6NUJ1 521 aa10.52□□□□□ -0.73
GTF3C3-211ENST00000481098 PMEPA1Q969W9 287 aa10.52□□□□□ -0.73
GTF3C3-211ENST00000481098 LILRB5O75023 590 aa10.51□□□□□ -0.73
GTF3C3-211ENST00000481098 CYP2E1P05181 493 aaPredicted RBP10.51□□□□□ -0.73
GTF3C3-211ENST00000481098 CPB1P15086 417 aa10.51□□□□□ -0.73
GTF3C3-211ENST00000481098 COL13A1Q5TAT6 717 aaPredicted RBP10.51□□□□□ -0.73
GTF3C3-211ENST00000481098 C1orf127Q8N9H9 656 aa10.51□□□□□ -0.73
GTF3C3-211ENST00000481098 ALKBH8Q96BT7 664 aaKnown RBP10.5□□□□□ -0.73
GTF3C3-211ENST00000481098 DMRTB1Q96MA1 342 aa10.5□□□□□ -0.73
GTF3C3-211ENST00000481098 SALL4Q9UJQ4 1053 aa10.5□□□□□ -0.73
GTF3C3-211ENST00000481098 NID1P14543 1247 aa10.49□□□□□ -0.73
GTF3C3-211ENST00000481098 EIF2AK2P19525 551 aaKnown RBP10.49□□□□□ -0.73
GTF3C3-211ENST00000481098 GSK3AP49840 483 aa10.49□□□□□ -0.73
GTF3C3-211ENST00000481098 KCNMA1Q12791 1236 aa10.49□□□□□ -0.73
GTF3C3-211ENST00000481098 ELMSAN1Q6PJG2 1045 aa10.49□□□□□ -0.73
GTF3C3-211ENST00000481098 ILDR2Q71H61 639 aa10.49□□□□□ -0.73
GTF3C3-211ENST00000481098 SND1Q7KZF4 910 aaKnown RBP eCLIP10.49□□□□□ -0.73
GTF3C3-211ENST00000481098 J3QW42 95 aa10.48□□□□□ -0.73
GTF3C3-211ENST00000481098 PHACTR2O75167 634 aa10.48□□□□□ -0.73
GTF3C3-211ENST00000481098 RGS9O75916 674 aaPredicted RBP10.48□□□□□ -0.73
GTF3C3-211ENST00000481098 CES1P23141 567 aa10.48□□□□□ -0.73
GTF3C3-211ENST00000481098 AFF1P51825 1210 aaKnown RBP10.48□□□□□ -0.73
GTF3C3-211ENST00000481098 GRIK5Q16478 980 aa10.48□□□□□ -0.73
GTF3C3-211ENST00000481098 HFE2Q6ZVN8 426 aa10.48□□□□□ -0.73
GTF3C3-211ENST00000481098 CEP120Q8N960 986 aa10.48□□□□□ -0.73
GTF3C3-211ENST00000481098 TRIM11Q96F44 468 aa10.48□□□□□ -0.73
GTF3C3-211ENST00000481098 JPH1Q9HDC5 661 aaPredicted RBP10.48□□□□□ -0.73
GTF3C3-211ENST00000481098 FOXD3Q9UJU5 478 aaPredicted RBP10.48□□□□□ -0.73
GTF3C3-211ENST00000481098 GPR182O15218 404 aa10.47□□□□□ -0.73
GTF3C3-211ENST00000481098 GHRHP01286 108 aa10.47□□□□□ -0.73
GTF3C3-211ENST00000481098 C8orf86Q6ZUL3 223 aa10.47□□□□□ -0.73
GTF3C3-211ENST00000481098 TMC7Q7Z402 723 aa10.47□□□□□ -0.73
GTF3C3-211ENST00000481098 PLD4Q96BZ4 506 aa10.47□□□□□ -0.73
GTF3C3-211ENST00000481098 RBSNQ9H1K0 784 aa10.47□□□□□ -0.73
GTF3C3-211ENST00000481098 NEFLP07196 543 aa10.46□□□□□ -0.73
GTF3C3-211ENST00000481098 ALYREFQ86V81 257 aaKnown RBP10.46□□□□□ -0.73
GTF3C3-211ENST00000481098 NUDT8Q8WV74 236 aa10.46□□□□□ -0.73
GTF3C3-211ENST00000481098 SPACA7Q96KW9 195 aa10.46□□□□□ -0.73
GTF3C3-211ENST00000481098 SMG9Q9H0W8 520 aaKnown RBP10.46□□□□□ -0.73
GTF3C3-211ENST00000481098 ZFYVE28Q9HCC9 887 aa10.46□□□□□ -0.73
GTF3C3-211ENST00000481098 NOP53Q9NZM5 478 aaKnown RBP10.46□□□□□ -0.73
GTF3C3-211ENST00000481098 NCAPG2Q86XI2 1143 aa10.45□□□□□ -0.74
GTF3C3-211ENST00000481098 KANSL3Q9P2N6 904 aa10.45□□□□□ -0.74
GTF3C3-211ENST00000481098 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.45□□□□□ -0.74
GTF3C3-211ENST00000481098 EREGO14944 169 aa10.44□□□□□ -0.74
GTF3C3-211ENST00000481098 MAPK1P28482 360 aa10.44□□□□□ -0.74
GTF3C3-211ENST00000481098 AMOTL2Q9Y2J4 779 aa10.44□□□□□ -0.74
GTF3C3-211ENST00000481098 SPDYE3A6NKU9 549 aa10.43□□□□□ -0.74
GTF3C3-211ENST00000481098 TREHO43280 583 aa10.43□□□□□ -0.74
GTF3C3-211ENST00000481098 EDN3P14138 238 aa10.43□□□□□ -0.74
GTF3C3-211ENST00000481098 COL8A1P27658 744 aa10.43□□□□□ -0.74
GTF3C3-211ENST00000481098 IRS1P35568 1242 aa10.43□□□□□ -0.74
GTF3C3-211ENST00000481098 DSC3Q14574 896 aa10.43□□□□□ -0.74
GTF3C3-211ENST00000481098 CACTIN-AS1Q8N1I8 211 aa10.43□□□□□ -0.74
GTF3C3-211ENST00000481098 TMC1Q8TDI8 760 aa10.43□□□□□ -0.74
GTF3C3-211ENST00000481098 ASB16Q96NS5 453 aa10.43□□□□□ -0.74
GTF3C3-211ENST00000481098 PLVAPQ9BX97 442 aa10.43□□□□□ -0.74
GTF3C3-211ENST00000481098 PBX4Q9BYU1 374 aa10.43□□□□□ -0.74
GTF3C3-211ENST00000481098 DNAJC25Q9H1X3 360 aa10.43□□□□□ -0.74
GTF3C3-211ENST00000481098 SUV39H2Q9H5I1 410 aa10.43□□□□□ -0.74
GTF3C3-211ENST00000481098 ATP11AP98196 1134 aa10.42□□□□□ -0.74
GTF3C3-211ENST00000481098 RASSF7Q02833 373 aa10.41□□□□□ -0.74
GTF3C3-211ENST00000481098 ORC1Q13415 861 aa10.41□□□□□ -0.74
GTF3C3-211ENST00000481098 RASSF4Q9H2L5 321 aa10.41□□□□□ -0.74
GTF3C3-211ENST00000481098 DZANK1Q9NVP4 752 aa10.41□□□□□ -0.74
GTF3C3-211ENST00000481098 NFKBIEO00221 500 aa10.4□□□□□ -0.74
GTF3C3-211ENST00000481098 SMNDC1O75940 238 aaKnown RBP eCLIP10.4□□□□□ -0.74
GTF3C3-211ENST00000481098 BAG6P46379 1132 aa10.4□□□□□ -0.74
GTF3C3-211ENST00000481098 PEAR1Q5VY43 1037 aaPredicted RBP10.4□□□□□ -0.74
GTF3C3-211ENST00000481098 MSL1Q68DK7 614 aa10.4□□□□□ -0.74
GTF3C3-211ENST00000481098 ZSCAN29Q8IWY8 852 aaPredicted RBP10.4□□□□□ -0.74
GTF3C3-211ENST00000481098 GALNT12Q8IXK2 581 aa10.4□□□□□ -0.74
GTF3C3-211ENST00000481098 NIF3L1Q9GZT8 377 aa10.4□□□□□ -0.74
GTF3C3-211ENST00000481098 CPNE3O75131 537 aaKnown RBP10.39□□□□□ -0.75
GTF3C3-211ENST00000481098 DTWD1Q8N5C7 304 aa10.39□□□□□ -0.75
GTF3C3-211ENST00000481098 EIF1AYO14602 144 aaKnown RBP10.38□□□□□ -0.75
GTF3C3-211ENST00000481098 TMEM102Q8N9M5 508 aaPredicted RBP10.38□□□□□ -0.75
GTF3C3-211ENST00000481098 TRIM33Q9UPN9 1127 aa10.38□□□□□ -0.75
GTF3C3-211ENST00000481098 SPATA31C1P0DKV0 1188 aa10.37□□□□□ -0.75
GTF3C3-211ENST00000481098 ACPPP15309 386 aa10.37□□□□□ -0.75
GTF3C3-211ENST00000481098 FMR1Q06787 632 aaKnown RBP eCLIP10.37□□□□□ -0.75
GTF3C3-211ENST00000481098 USPL1Q5W0Q7 1092 aa10.37□□□□□ -0.75
GTF3C3-211ENST00000481098 CEP135Q66GS9 1140 aa10.37□□□□□ -0.75
GTF3C3-211ENST00000481098 WFDC8Q8IUA0 241 aa10.37□□□□□ -0.75
GTF3C3-211ENST00000481098 DCAF5Q96JK2 942 aa10.37□□□□□ -0.75
GTF3C3-211ENST00000481098 CSRNP1Q96S65 589 aa10.37□□□□□ -0.75
GTF3C3-211ENST00000481098 POP1Q99575 1024 aaKnown RBP10.37□□□□□ -0.75
GTF3C3-211ENST00000481098 ZKSCAN3Q9BRR0 538 aa10.37□□□□□ -0.75
GTF3C3-211ENST00000481098 OSMRQ99650 979 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms