RNA–Protein interactions for RNA: ENST00000480698.1

TMEM40-207, Transcript of transmembrane protein 40, humanhuman

TSL 2

Gene TMEM40, Length 507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-207ENST00000480698 ZNF646O15015 1829 aaPredicted RBP12.64□□□□□ -0.39
TMEM40-207ENST00000480698 UBE2Q2LH0YL09 131 aa12.63□□□□□ -0.39
TMEM40-207ENST00000480698 ALDH1A1P00352 501 aa12.63□□□□□ -0.39
TMEM40-207ENST00000480698 CHRDL2Q6WN34 429 aa12.63□□□□□ -0.39
TMEM40-207ENST00000480698 PPP1R42Q7Z4L9 355 aa12.63□□□□□ -0.39
TMEM40-207ENST00000480698 GMLQ99445 158 aa12.63□□□□□ -0.39
TMEM40-207ENST00000480698 ECE2O60344 883 aa12.62□□□□□ -0.39
TMEM40-207ENST00000480698 SCARF1Q14162 830 aa12.62□□□□□ -0.39
TMEM40-207ENST00000480698 WASHC4Q2M389 1173 aa12.62□□□□□ -0.39
TMEM40-207ENST00000480698 KIF6Q6ZMV9 814 aa12.62□□□□□ -0.39
TMEM40-207ENST00000480698 RSPH6AQ9H0K4 717 aa12.62□□□□□ -0.39
TMEM40-207ENST00000480698 ZBTB3Q9H5J0 574 aa12.62□□□□□ -0.39
TMEM40-207ENST00000480698 POLLQ9UGP5 575 aa12.62□□□□□ -0.39
TMEM40-207ENST00000480698 LDLRAD1Q5T700 205 aa12.61□□□□□ -0.39
TMEM40-207ENST00000480698 KNSTRNQ9Y448 316 aa12.61□□□□□ -0.39
TMEM40-207ENST00000480698 SPRYD7Q5W111 196 aa12.6□□□□□ -0.39
TMEM40-207ENST00000480698 MCM10Q7L590 875 aa12.6□□□□□ -0.39
TMEM40-207ENST00000480698 AGBL3Q8NEM8 1001 aa12.6□□□□□ -0.39
TMEM40-207ENST00000480698 POLR3GLQ9BT43 218 aa12.6□□□□□ -0.39
TMEM40-207ENST00000480698 UTP14AQ9BVJ6 771 aaKnown RBP12.6□□□□□ -0.39
TMEM40-207ENST00000480698 MUC3AQ02505 3323 aa12.6□□□□□ -0.39
TMEM40-207ENST00000480698 ERBB4Q15303 1308 aa12.6□□□□□ -0.39
TMEM40-207ENST00000480698 IGF2BP3O00425 579 aaKnown RBP eCLIP12.59□□□□□ -0.39
TMEM40-207ENST00000480698 DDX46Q7L014 1031 aaKnown RBP12.59□□□□□ -0.39
TMEM40-207ENST00000480698 IFNL1Q8IU54 200 aa12.59□□□□□ -0.39
TMEM40-207ENST00000480698 ERO1AQ96HE7 468 aa12.59□□□□□ -0.39
TMEM40-207ENST00000480698 HTATSF1O43719 755 aaKnown RBP12.58□□□□□ -0.4
TMEM40-207ENST00000480698 PRKAR2BP31323 418 aa12.58□□□□□ -0.4
TMEM40-207ENST00000480698 INHBEP58166 350 aa12.58□□□□□ -0.4
TMEM40-207ENST00000480698 PTPN12Q05209 780 aaKnown RBP12.58□□□□□ -0.4
TMEM40-207ENST00000480698 RSBN1LQ6PCB5 846 aaPredicted RBP12.58□□□□□ -0.4
TMEM40-207ENST00000480698 NGEFQ8N5V2 710 aa12.58□□□□□ -0.4
TMEM40-207ENST00000480698 MYOZ2Q9NPC6 264 aa12.58□□□□□ -0.4
TMEM40-207ENST00000480698 A0A1W2PPC1 479 aa12.57□□□□□ -0.4
TMEM40-207ENST00000480698 PER1O15534 1290 aaPredicted RBP12.57□□□□□ -0.4
TMEM40-207ENST00000480698 HCLS1P14317 486 aaPredicted RBP12.57□□□□□ -0.4
TMEM40-207ENST00000480698 GPSM2P81274 684 aa12.57□□□□□ -0.4
TMEM40-207ENST00000480698 MKRN3Q13064 507 aaKnown RBP12.57□□□□□ -0.4
TMEM40-207ENST00000480698 PDIA6Q15084 440 aa12.57□□□□□ -0.4
TMEM40-207ENST00000480698 UBE2Q1Q7Z7E8 422 aa12.57□□□□□ -0.4
TMEM40-207ENST00000480698 NLRP10Q86W26 655 aa12.57□□□□□ -0.4
TMEM40-207ENST00000480698 TBC1D16Q8TBP0 767 aa12.57□□□□□ -0.4
TMEM40-207ENST00000480698 CD99L2Q8TCZ2 262 aa12.57□□□□□ -0.4
TMEM40-207ENST00000480698 PODXL2Q9NZ53 605 aa12.57□□□□□ -0.4
TMEM40-207ENST00000480698 MANSC4A6NHS7 340 aaPredicted RBP12.56□□□□□ -0.4
TMEM40-207ENST00000480698 SOX1O00570 391 aaPredicted RBP12.56□□□□□ -0.4
TMEM40-207ENST00000480698 RIMBP2O15034 1052 aa12.56□□□□□ -0.4
TMEM40-207ENST00000480698 ZBTB48P10074 688 aaPredicted RBP12.56□□□□□ -0.4
TMEM40-207ENST00000480698 EIF4A1P60842 406 aaKnown RBP12.56□□□□□ -0.4
TMEM40-207ENST00000480698 DCTN1Q14203 1278 aa12.56□□□□□ -0.4
TMEM40-207ENST00000480698 TAF7Q15545 349 aaPredicted RBP12.56□□□□□ -0.4
TMEM40-207ENST00000480698 MAP3K11Q16584 847 aa12.56□□□□□ -0.4
TMEM40-207ENST00000480698 DOK7Q18PE1 504 aa12.56□□□□□ -0.4
TMEM40-207ENST00000480698 PRAMEF18Q5VWM3 479 aa12.56□□□□□ -0.4
TMEM40-207ENST00000480698 CELF1Q92879 486 aaKnown RBP12.56□□□□□ -0.4
TMEM40-207ENST00000480698 SHISA4Q96DD7 197 aa12.56□□□□□ -0.4
TMEM40-207ENST00000480698 TMEM106CQ9BVX2 250 aa12.56□□□□□ -0.4
TMEM40-207ENST00000480698 EFCC1Q9HA90 598 aa12.56□□□□□ -0.4
TMEM40-207ENST00000480698 NSFL1CQ9UNZ2 370 aaKnown RBP12.56□□□□□ -0.4
TMEM40-207ENST00000480698 SCAF8Q9UPN6 1271 aaKnown RBP12.56□□□□□ -0.4
TMEM40-207ENST00000480698 RRP7AQ9Y3A4 280 aaKnown RBP12.56□□□□□ -0.4
TMEM40-207ENST00000480698 SSC5DA1L4H1 1573 aa12.56□□□□□ -0.4
TMEM40-207ENST00000480698 U2SURPO15042 1029 aaKnown RBP12.55□□□□□ -0.4
TMEM40-207ENST00000480698 MYL6BP14649 208 aa12.55□□□□□ -0.4
TMEM40-207ENST00000480698 SF3B3Q15393 1217 aaKnown RBP12.55□□□□□ -0.4
TMEM40-207ENST00000480698 EYA3Q99504 573 aa12.55□□□□□ -0.4
TMEM40-207ENST00000480698 TIMELESSQ9UNS1 1208 aa12.55□□□□□ -0.4
TMEM40-207ENST00000480698 COL1A1P02452 1464 aaPredicted RBP12.54□□□□□ -0.4
TMEM40-207ENST00000480698 TESPA1A2RU30 521 aaPredicted RBP12.54□□□□□ -0.4
TMEM40-207ENST00000480698 USP17L8P0C7I0 530 aa12.54□□□□□ -0.4
TMEM40-207ENST00000480698 CRHR2Q13324 411 aa12.54□□□□□ -0.4
TMEM40-207ENST00000480698 NBPF9Q3BBW0 867 aa12.54□□□□□ -0.4
TMEM40-207ENST00000480698 COL25A1Q9BXS0 654 aaPredicted RBP12.54□□□□□ -0.4
TMEM40-207ENST00000480698 SH3TC1Q8TE82 1336 aa12.54□□□□□ -0.4
TMEM40-207ENST00000480698 EYSQ5T1H1 3165 aa12.54□□□□□ -0.4
TMEM40-207ENST00000480698 WNT10BO00744 389 aa12.53□□□□□ -0.4
TMEM40-207ENST00000480698 TCIRG1Q13488 830 aa12.53□□□□□ -0.4
TMEM40-207ENST00000480698 RTF1Q92541 710 aaKnown RBP12.53□□□□□ -0.4
TMEM40-207ENST00000480698 PTCH2Q9Y6C5 1203 aa12.53□□□□□ -0.4
TMEM40-207ENST00000480698 UNCXA6NJT0 531 aa12.52□□□□□ -0.41
TMEM40-207ENST00000480698 C6orf229H3BNL8 230 aa12.52□□□□□ -0.41
TMEM40-207ENST00000480698 HSPA5P11021 654 aaKnown RBP12.52□□□□□ -0.41
TMEM40-207ENST00000480698 SP3Q02447 781 aa12.52□□□□□ -0.41
TMEM40-207ENST00000480698 GPR153Q6NV75 609 aa12.52□□□□□ -0.41
TMEM40-207ENST00000480698 ARMC9Q7Z3E5 817 aa12.52□□□□□ -0.41
TMEM40-207ENST00000480698 MIS18AQ9NYP9 233 aa12.52□□□□□ -0.41
TMEM40-207ENST00000480698 NF2P35240 595 aa12.51□□□□□ -0.41
TMEM40-207ENST00000480698 SLC9C1Q4G0N8 1177 aa12.51□□□□□ -0.41
TMEM40-207ENST00000480698 HSP90AB3PQ58FF7 597 aa12.51□□□□□ -0.41
TMEM40-207ENST00000480698 LRCH3Q96II8 777 aa12.51□□□□□ -0.41
TMEM40-207ENST00000480698 ZBED3Q96IU2 234 aaPredicted RBP12.51□□□□□ -0.41
TMEM40-207ENST00000480698 WNK4Q96J92 1243 aa12.51□□□□□ -0.41
TMEM40-207ENST00000480698 PTPN18Q99952 460 aa12.51□□□□□ -0.41
TMEM40-207ENST00000480698 ZC3H12CQ9C0D7 883 aaKnown RBP12.51□□□□□ -0.41
TMEM40-207ENST00000480698 DLG5Q8TDM6 1919 aa12.5□□□□□ -0.41
TMEM40-207ENST00000480698 GJA5P36382 358 aa12.5□□□□□ -0.41
TMEM40-207ENST00000480698 EIF4G2P78344 907 aaKnown RBP eCLIP12.5□□□□□ -0.41
TMEM40-207ENST00000480698 TTLL12Q14166 644 aaPredicted RBP12.5□□□□□ -0.41
TMEM40-207ENST00000480698 PROSER3Q2NL68 480 aa12.5□□□□□ -0.41
TMEM40-207ENST00000480698 NBPF11Q86T75 865 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms