RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 MTFR1LQ9H019 292 aa21.6■■□□□ 1.05
UPF3A-206ENST00000480362 BSDC1Q9NW68 430 aaPredicted RBP21.6■■□□□ 1.05
UPF3A-206ENST00000480362 ATF5Q9Y2D1 282 aaPredicted RBP21.6■■□□□ 1.05
UPF3A-206ENST00000480362 SPEF2Q9C093 1822 aa21.59■■□□□ 1.05
UPF3A-206ENST00000480362 MX1P20591 662 aa21.59■■□□□ 1.05
UPF3A-206ENST00000480362 HOXA10P31260 410 aaPredicted RBP21.59■■□□□ 1.05
UPF3A-206ENST00000480362 GRAPQ13588 217 aa21.59■■□□□ 1.05
UPF3A-206ENST00000480362 GRAPLQ8TC17 118 aaPredicted RBP21.59■■□□□ 1.05
UPF3A-206ENST00000480362 STAP2Q9UGK3 403 aa21.59■■□□□ 1.05
UPF3A-206ENST00000480362 HELBQ8NG08 1087 aaPredicted RBP21.58■■□□□ 1.05
UPF3A-206ENST00000480362 OSBPL3Q9H4L5 887 aa21.58■■□□□ 1.05
UPF3A-206ENST00000480362 AKAP2Q9Y2D5 859 aa21.58■■□□□ 1.05
UPF3A-206ENST00000480362 PDE8BO95263 885 aa21.57■■□□□ 1.04
UPF3A-206ENST00000480362 SRGNP10124 158 aa21.57■■□□□ 1.04
UPF3A-206ENST00000480362 TIMM10P62072 90 aa21.57■■□□□ 1.04
UPF3A-206ENST00000480362 VGLL2Q8N8G2 317 aa21.57■■□□□ 1.04
UPF3A-206ENST00000480362 NEUROD6Q96NK8 337 aa21.57■■□□□ 1.04
UPF3A-206ENST00000480362 CRAMP1Q96RY5 1269 aa21.57■■□□□ 1.04
UPF3A-206ENST00000480362 TLR7Q9NYK1 1049 aaKnown RBP21.57■■□□□ 1.04
UPF3A-206ENST00000480362 NPR1P16066 1061 aa21.56■■□□□ 1.04
UPF3A-206ENST00000480362 POLD1P28340 1107 aa21.56■■□□□ 1.04
UPF3A-206ENST00000480362 CHRNDQ07001 517 aa21.56■■□□□ 1.04
UPF3A-206ENST00000480362 TSHZ3Q63HK5 1081 aa21.56■■□□□ 1.04
UPF3A-206ENST00000480362 C2CD5Q86YS7 1000 aa21.56■■□□□ 1.04
UPF3A-206ENST00000480362 MINPP1Q9UNW1 487 aa21.56■■□□□ 1.04
UPF3A-206ENST00000480362 A0A1B0GUL7 405 aa21.55■■□□□ 1.04
UPF3A-206ENST00000480362 TAF5LO75529 589 aa21.55■■□□□ 1.04
UPF3A-206ENST00000480362 ATP2B3Q16720 1220 aa21.55■■□□□ 1.04
UPF3A-206ENST00000480362 ZNF609O15014 1411 aa21.55■■□□□ 1.04
UPF3A-206ENST00000480362 TTC41PQ6P2S7 1318 aa21.55■■□□□ 1.04
UPF3A-206ENST00000480362 H0YIN7 160 aa21.54■■□□□ 1.04
UPF3A-206ENST00000480362 BBOX1O75936 387 aa21.54■■□□□ 1.04
UPF3A-206ENST00000480362 TTC22Q5TAA0 569 aa21.54■■□□□ 1.04
UPF3A-206ENST00000480362 MASTLQ96GX5 879 aa21.54■■□□□ 1.04
UPF3A-206ENST00000480362 GPATCH3Q96I76 525 aa21.54■■□□□ 1.04
UPF3A-206ENST00000480362 DBNDD2Q9BQY9 259 aa21.54■■□□□ 1.04
UPF3A-206ENST00000480362 ECHDC1Q9NTX5 307 aa21.54■■□□□ 1.04
UPF3A-206ENST00000480362 DBNLQ9UJU6 430 aaKnown RBP21.54■■□□□ 1.04
UPF3A-206ENST00000480362 AOX1Q06278 1338 aa21.54■■□□□ 1.04
UPF3A-206ENST00000480362 GSPT1P15170 499 aaKnown RBP21.52■■□□□ 1.04
UPF3A-206ENST00000480362 FGFR2P21802 821 aa21.52■■□□□ 1.04
UPF3A-206ENST00000480362 ALDH1B1P30837 517 aa21.52■■□□□ 1.04
UPF3A-206ENST00000480362 PUM3Q15397 648 aaKnown RBP21.52■■□□□ 1.04
UPF3A-206ENST00000480362 BMP2KLQ5H9B9 411 aa21.52■■□□□ 1.04
UPF3A-206ENST00000480362 PI4K2BQ8TCG2 481 aa21.52■■□□□ 1.04
UPF3A-206ENST00000480362 ZNF622Q969S3 477 aaKnown RBP eCLIP21.52■■□□□ 1.041e-6■■■□□ 14.6
UPF3A-206ENST00000480362 C10orf71Q711Q0 1435 aa21.52■■□□□ 1.04
UPF3A-206ENST00000480362 ERC2O15083 957 aa21.51■■□□□ 1.03
UPF3A-206ENST00000480362 ADORA1P30542 326 aa21.51■■□□□ 1.03
UPF3A-206ENST00000480362 STYK1Q6J9G0 422 aa21.51■■□□□ 1.03
UPF3A-206ENST00000480362 LPIN2Q92539 896 aa21.51■■□□□ 1.03
UPF3A-206ENST00000480362 XAGE2Q96GT9 111 aa21.51■■□□□ 1.03
UPF3A-206ENST00000480362 ANKRD2Q9GZV1 360 aa21.51■■□□□ 1.03
UPF3A-206ENST00000480362 COL11A2P13942 1736 aaPredicted RBP21.5■■□□□ 1.03
UPF3A-206ENST00000480362 SNAP23O00161 211 aa21.5■■□□□ 1.03
UPF3A-206ENST00000480362 GLRX3O76003 335 aaKnown RBP21.5■■□□□ 1.03
UPF3A-206ENST00000480362 CHRNA5P30532 468 aa21.5■■□□□ 1.03
UPF3A-206ENST00000480362 PPEF1O14829 653 aaPredicted RBP21.49■■□□□ 1.03
UPF3A-206ENST00000480362 IFIT1P09914 478 aaKnown RBP21.49■■□□□ 1.03
UPF3A-206ENST00000480362 SLC5A1P13866 664 aa21.49■■□□□ 1.03
UPF3A-206ENST00000480362 GORABQ5T7V8 394 aa21.49■■□□□ 1.03
UPF3A-206ENST00000480362 TMC4Q7Z404 712 aa21.49■■□□□ 1.03
UPF3A-206ENST00000480362 SGIP1Q9BQI5 828 aa21.49■■□□□ 1.03
UPF3A-206ENST00000480362 SLC51AQ86UW1 340 aa21.48■■□□□ 1.03
UPF3A-206ENST00000480362 A0A1B0GUL6 1792 aa21.48■■□□□ 1.03
UPF3A-206ENST00000480362 ATP5JP18859 108 aa21.47■■□□□ 1.03
UPF3A-206ENST00000480362 SDSP20132 328 aa21.47■■□□□ 1.03
UPF3A-206ENST00000480362 PTGER2P43116 358 aa21.47■■□□□ 1.03
UPF3A-206ENST00000480362 UBE4AQ14139 1066 aa21.47■■□□□ 1.03
UPF3A-206ENST00000480362 CCDC158Q5M9N0 1113 aa21.47■■□□□ 1.03
UPF3A-206ENST00000480362 SP8Q8IXZ3 490 aa21.47■■□□□ 1.03
UPF3A-206ENST00000480362 WTIPA6NIX2 430 aaPredicted RBP21.46■■□□□ 1.03
UPF3A-206ENST00000480362 CNKSR1Q969H4 720 aa21.46■■□□□ 1.03
UPF3A-206ENST00000480362 BOLA2Q9H3K6 86 aa21.46■■□□□ 1.03
UPF3A-206ENST00000480362 ANKIB1Q9P2G1 1089 aa21.46■■□□□ 1.03
UPF3A-206ENST00000480362 ATP6V0A2Q9Y487 856 aa21.46■■□□□ 1.03
UPF3A-206ENST00000480362 TRIM6-TRIM34B2RNG4 842 aa21.45■■□□□ 1.02
UPF3A-206ENST00000480362 MAP4K4O95819 1239 aaPredicted RBP21.45■■□□□ 1.02
UPF3A-206ENST00000480362 KCNJ4P48050 445 aa21.45■■□□□ 1.02
UPF3A-206ENST00000480362 GPSM2P81274 684 aa21.45■■□□□ 1.02
UPF3A-206ENST00000480362 TTC39AQ5SRH9 613 aa21.45■■□□□ 1.02
UPF3A-206ENST00000480362 LEMD3Q9Y2U8 911 aa21.45■■□□□ 1.02
UPF3A-206ENST00000480362 XDHP47989 1333 aa21.45■■□□□ 1.02
UPF3A-206ENST00000480362 KIF13BQ9NQT8 1826 aa21.44■■□□□ 1.02
UPF3A-206ENST00000480362 A0A0G2JLW4 131 aa21.44■■□□□ 1.02
UPF3A-206ENST00000480362 DPEP1P16444 411 aa21.44■■□□□ 1.02
UPF3A-206ENST00000480362 RILPL2Q969X0 211 aa21.44■■□□□ 1.02
UPF3A-206ENST00000480362 NSFL1CQ9UNZ2 370 aaKnown RBP21.44■■□□□ 1.02
UPF3A-206ENST00000480362 ZNF804BA4D1E1 1349 aa21.44■■□□□ 1.02
UPF3A-206ENST00000480362 TGFB2P61812 414 aa21.43■■□□□ 1.02
UPF3A-206ENST00000480362 C8orf34Q49A92 452 aa21.43■■□□□ 1.02
UPF3A-206ENST00000480362 CCDC102BQ68D86 513 aa21.43■■□□□ 1.02
UPF3A-206ENST00000480362 SPON1Q9HCB6 807 aa21.43■■□□□ 1.02
UPF3A-206ENST00000480362 ARAP2Q8WZ64 1704 aa21.43■■□□□ 1.02
UPF3A-206ENST00000480362 ATP2B4P23634 1241 aa21.42■■□□□ 1.02
UPF3A-206ENST00000480362 PHKA1P46020 1223 aa21.42■■□□□ 1.02
UPF3A-206ENST00000480362 PRPF40BQ6NWY9 871 aaKnown RBP21.42■■□□□ 1.02
UPF3A-206ENST00000480362 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.42■■□□□ 1.02
UPF3A-206ENST00000480362 HAUS7Q99871 368 aa21.42■■□□□ 1.02
UPF3A-206ENST00000480362 TMX4Q9H1E5 349 aaPredicted RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms